RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 GNG8Q9UK08 70 aa12.46□□□□□ -0.41
VPS26A-205ENST00000489656 FAM215AQ9Y5M1 114 aa12.46□□□□□ -0.41
VPS26A-205ENST00000489656 TRIM64BA6NI03 449 aa12.45□□□□□ -0.42
VPS26A-205ENST00000489656 PRRG2O14669 202 aa12.45□□□□□ -0.42
VPS26A-205ENST00000489656 PLPP2O43688 288 aa12.45□□□□□ -0.42
VPS26A-205ENST00000489656 KIR2DL2P43627 348 aaPredicted RBP12.45□□□□□ -0.42
VPS26A-205ENST00000489656 SH3BGRP55822 239 aaPredicted RBP12.45□□□□□ -0.42
VPS26A-205ENST00000489656 AQP6Q13520 282 aa12.45□□□□□ -0.42
VPS26A-205ENST00000489656 SGCAQ16586 387 aa12.45□□□□□ -0.42
VPS26A-205ENST00000489656 TIMM50Q3ZCQ8 353 aa12.45□□□□□ -0.42
VPS26A-205ENST00000489656 PRR30Q53SZ7 412 aaPredicted RBP12.45□□□□□ -0.42
VPS26A-205ENST00000489656 LIPKQ5VXJ0 399 aa12.45□□□□□ -0.42
VPS26A-205ENST00000489656 OTPQ5XKR4 325 aa12.45□□□□□ -0.42
VPS26A-205ENST00000489656 FBXW9Q5XUX1 488 aa12.45□□□□□ -0.42
VPS26A-205ENST00000489656 DMKNQ6E0U4 476 aaPredicted RBP12.45□□□□□ -0.42
VPS26A-205ENST00000489656 FDX2Q6P4F2 183 aa12.45□□□□□ -0.42
VPS26A-205ENST00000489656 RPL22L1Q6P5R6 122 aaKnown RBP12.45□□□□□ -0.42
VPS26A-205ENST00000489656 PCSK4Q6UW60 755 aa12.45□□□□□ -0.42
VPS26A-205ENST00000489656 TFAP2EQ6VUC0 442 aa12.45□□□□□ -0.42
VPS26A-205ENST00000489656 GDPGP1Q6ZNW5 385 aa12.45□□□□□ -0.42
VPS26A-205ENST00000489656 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.45□□□□□ -0.42
VPS26A-205ENST00000489656 SYT9Q86SS6 491 aa12.45□□□□□ -0.42
VPS26A-205ENST00000489656 LINC00346Q8IVM7 164 aa12.45□□□□□ -0.42
VPS26A-205ENST00000489656 OR2AJ1Q8NGZ0 328 aa12.45□□□□□ -0.42
VPS26A-205ENST00000489656 MAP6Q96JE9 813 aa12.45□□□□□ -0.42
VPS26A-205ENST00000489656 MROQ9BYG7 248 aa12.45□□□□□ -0.42
VPS26A-205ENST00000489656 TTTY10Q9BZA0 68 aa12.45□□□□□ -0.42
VPS26A-205ENST00000489656 NAA50Q9GZZ1 169 aaKnown RBP12.45□□□□□ -0.42
VPS26A-205ENST00000489656 ACOXLQ9NUZ1 547 aa12.45□□□□□ -0.42
VPS26A-205ENST00000489656 SLCO1C1Q9NYB5 712 aa12.45□□□□□ -0.42
VPS26A-205ENST00000489656 UPB1Q9UBR1 384 aa12.45□□□□□ -0.42
VPS26A-205ENST00000489656 GDF2Q9UK05 429 aaPredicted RBP12.45□□□□□ -0.42
VPS26A-205ENST00000489656 IKZF2Q9UKS7 526 aa12.45□□□□□ -0.42
VPS26A-205ENST00000489656 POLR1DQ9Y2S0 133 aa12.45□□□□□ -0.42
VPS26A-205ENST00000489656 SF3B6Q9Y3B4 125 aaKnown RBP12.45□□□□□ -0.42
VPS26A-205ENST00000489656 CCDC160A6NGH7 325 aa12.44□□□□□ -0.42
VPS26A-205ENST00000489656 E9PI62 339 aa12.44□□□□□ -0.42
VPS26A-205ENST00000489656 MAGEB4O15481 346 aaPredicted RBP12.44□□□□□ -0.42
VPS26A-205ENST00000489656 NOL3O60936 208 aaKnown RBP12.44□□□□□ -0.42
VPS26A-205ENST00000489656 OR8G3PP0DMU2 310 aa12.44□□□□□ -0.42
VPS26A-205ENST00000489656 MPGP29372 298 aa12.44□□□□□ -0.42
VPS26A-205ENST00000489656 GABRA5P31644 462 aa12.44□□□□□ -0.42
VPS26A-205ENST00000489656 CEACAM8P31997 349 aaPredicted RBP12.44□□□□□ -0.42
VPS26A-205ENST00000489656 DCTDP32321 178 aa12.44□□□□□ -0.42
VPS26A-205ENST00000489656 OPRL1P41146 370 aa12.44□□□□□ -0.42
VPS26A-205ENST00000489656 SIRPAP78324 504 aa12.44□□□□□ -0.42
VPS26A-205ENST00000489656 RBPJQ06330 500 aa12.44□□□□□ -0.42
VPS26A-205ENST00000489656 CDK5R1Q15078 307 aa12.44□□□□□ -0.42
VPS26A-205ENST00000489656 CTF1Q16619 201 aa12.44□□□□□ -0.42
VPS26A-205ENST00000489656 LIPNQ5VXI9 398 aa12.44□□□□□ -0.42
VPS26A-205ENST00000489656 LRRN1Q6UXK5 716 aa12.44□□□□□ -0.42
VPS26A-205ENST00000489656 KRT77Q7Z794 578 aa12.44□□□□□ -0.42
VPS26A-205ENST00000489656 DOLPP1Q86YN1 238 aa12.44□□□□□ -0.42
VPS26A-205ENST00000489656 GCNT2Q8N0V5 402 aa12.44□□□□□ -0.42
VPS26A-205ENST00000489656 SLC22A24Q8N4F4 322 aa12.44□□□□□ -0.42
VPS26A-205ENST00000489656 YIPF7Q8N8F6 280 aa12.44□□□□□ -0.42
VPS26A-205ENST00000489656 GJC3Q8NFK1 279 aa12.44□□□□□ -0.42
VPS26A-205ENST00000489656 SLAMF6Q96DU3 332 aa12.44□□□□□ -0.42
VPS26A-205ENST00000489656 C12orf49Q9H741 205 aa12.44□□□□□ -0.42
VPS26A-205ENST00000489656 ELOVL3Q9HB03 270 aa12.44□□□□□ -0.42
VPS26A-205ENST00000489656 ASH2LQ9UBL3 628 aa12.44□□□□□ -0.42
VPS26A-205ENST00000489656 PRSS50Q9UI38 385 aa12.44□□□□□ -0.42
VPS26A-205ENST00000489656 SIRT4Q9Y6E7 314 aaPredicted RBP12.44□□□□□ -0.42
VPS26A-205ENST00000489656 SPTA1P02549 2419 aa12.44□□□□□ -0.42
VPS26A-205ENST00000489656 ATRXP46100 2492 aa12.44□□□□□ -0.42
VPS26A-205ENST00000489656 ZNF878C9JN71 531 aa12.43□□□□□ -0.42
VPS26A-205ENST00000489656 H3BMQ9 156 aa12.43□□□□□ -0.42
VPS26A-205ENST00000489656 TNFSF13O75888 250 aa12.43□□□□□ -0.42
VPS26A-205ENST00000489656 TOXO94900 526 aa12.43□□□□□ -0.42
VPS26A-205ENST00000489656 IGHV3-9P01782 118 aa12.43□□□□□ -0.42
VPS26A-205ENST00000489656 CELP19835 753 aa12.43□□□□□ -0.42
VPS26A-205ENST00000489656 GALP22466 123 aa12.43□□□□□ -0.42
VPS26A-205ENST00000489656 GADD45AP24522 165 aa12.43□□□□□ -0.42
VPS26A-205ENST00000489656 PSMA1P25786 263 aaKnown RBP12.43□□□□□ -0.42
VPS26A-205ENST00000489656 GTF2A1P52655 376 aaPredicted RBP12.43□□□□□ -0.42
VPS26A-205ENST00000489656 RIDAP52758 137 aaKnown RBP12.43□□□□□ -0.42
VPS26A-205ENST00000489656 ARF1P84077 181 aaKnown RBP12.43□□□□□ -0.42
VPS26A-205ENST00000489656 TRAM1Q15629 374 aa12.43□□□□□ -0.42
VPS26A-205ENST00000489656 CD200R1LQ6Q8B3 271 aa12.43□□□□□ -0.42
VPS26A-205ENST00000489656 CORO6Q6QEF8 472 aa12.43□□□□□ -0.42
VPS26A-205ENST00000489656 CFAP77Q6ZQR2 320 aa12.43□□□□□ -0.42
VPS26A-205ENST00000489656 OR10S1Q8NGN2 331 aa12.43□□□□□ -0.42
VPS26A-205ENST00000489656 C12orf43Q96C57 262 aaKnown RBP12.43□□□□□ -0.42
VPS26A-205ENST00000489656 SMIM19Q96E16 107 aa12.43□□□□□ -0.42
VPS26A-205ENST00000489656 COQ7Q99807 217 aa12.43□□□□□ -0.42
VPS26A-205ENST00000489656 NIPAL2Q9H841 368 aa12.43□□□□□ -0.42
VPS26A-205ENST00000489656 PNRC2Q9NPJ4 139 aaKnown RBP12.43□□□□□ -0.42
VPS26A-205ENST00000489656 PLSCR4Q9NRQ2 329 aa12.43□□□□□ -0.42
VPS26A-205ENST00000489656 DDX28Q9NUL7 540 aaKnown RBP12.43□□□□□ -0.42
VPS26A-205ENST00000489656 STUB1Q9UNE7 303 aa12.43□□□□□ -0.42
VPS26A-205ENST00000489656 LRP12Q9Y561 859 aa12.43□□□□□ -0.42
VPS26A-205ENST00000489656 RTTNQ86VV8 2226 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 NBEAQ8NFP9 2946 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 RP1L1Q8IWN7 2480 aaPredicted RBP12.42□□□□□ -0.42
VPS26A-205ENST00000489656 TTLL8A6PVC2 850 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 PSMD9O00233 223 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 AIREO43918 545 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 GPRIN2O60269 458 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 SLC19A2O60779 497 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 SRSF10O75494 262 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms