RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 MIPOL1Q8TD10 442 aa6.2□□□□□ -1.42
EXOSC3-206ENST00000489414 RIT1Q92963 219 aa6.2□□□□□ -1.42
EXOSC3-206ENST00000489414 CPNE4Q96A23 557 aaPredicted RBP6.2□□□□□ -1.42
EXOSC3-206ENST00000489414 NMD3Q96D46 503 aaKnown RBP6.2□□□□□ -1.42
EXOSC3-206ENST00000489414 MS4A4EQ96PG1 132 aa6.2□□□□□ -1.42
EXOSC3-206ENST00000489414 PRR25Q96S07 402 aa6.2□□□□□ -1.42
EXOSC3-206ENST00000489414 MAPKAP1Q9BPZ7 522 aa6.2□□□□□ -1.42
EXOSC3-206ENST00000489414 PSD2Q9BQI7 771 aa6.2□□□□□ -1.42
EXOSC3-206ENST00000489414 ACTRT3Q9BYD9 372 aa6.2□□□□□ -1.42
EXOSC3-206ENST00000489414 SRXN1Q9BYN0 137 aa6.2□□□□□ -1.42
EXOSC3-206ENST00000489414 SLC7A10Q9NS82 523 aa6.2□□□□□ -1.42
EXOSC3-206ENST00000489414 IMPAD1Q9NX62 359 aa6.2□□□□□ -1.42
EXOSC3-206ENST00000489414 VNN3Q9NY84 501 aa6.2□□□□□ -1.42
EXOSC3-206ENST00000489414 MED11Q9P086 117 aa6.2□□□□□ -1.42
EXOSC3-206ENST00000489414 VPREB3Q9UKI3 123 aa6.2□□□□□ -1.42
EXOSC3-206ENST00000489414 LYVE1Q9Y5Y7 322 aa6.2□□□□□ -1.42
EXOSC3-206ENST00000489414 KIAA2026Q5HYC2 2103 aa6.2□□□□□ -1.42
EXOSC3-206ENST00000489414 OR6C70A6NIJ9 312 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 CLDN25C9JDP6 229 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 SLC1A7O00341 560 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 FAAHO00519 579 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 GMFGO60234 142 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 MPZL2O60487 215 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 MRPS14O60783 128 aaKnown RBP6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 FAM20BO75063 409 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 UGT2B17O75795 530 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 MFN2O95140 757 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 IGHV3-9P01782 118 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 HMGN2P05204 90 aaKnown RBP6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 H1F0P07305 194 aaKnown RBP6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 VSIG10L2P0DP72 767 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 PF4V1P10720 104 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 PORP16435 677 aaPredicted RBP6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 IL7RP16871 459 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 CRHBPP24387 322 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 ELK4P28324 431 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 KIR2DS4P43632 304 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 EVX1P49640 407 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 XKP51811 444 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 UGT2B15P54855 530 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 CARD18P57730 90 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 CDC42P60953 191 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 CXCR4P61073 352 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 CD47Q08722 323 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 LASP1Q14847 261 aaKnown RBP6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 NEDD8Q15843 81 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 RPS26P11Q5JNZ5 115 aaPredicted RBP6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 TMEM107Q6UX40 140 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 KCTD8Q6ZWB6 473 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 CLVS1Q8IUQ0 354 aaPredicted RBP6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 C1orf162Q8NEQ5 155 aaPredicted RBP6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 BPIFB6Q8NFQ5 453 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 OR52J3Q8NH60 311 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 ZNF420Q8TAQ5 688 aaPredicted RBP6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 IPCEF1Q8WWN9 437 aaPredicted RBP6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 TANKQ92844 425 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 ZNF566Q969W8 418 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 ELP4Q96EB1 424 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 CNRIP1Q96F85 164 aaPredicted RBP6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 OTUB1Q96FW1 271 aaPredicted RBP6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 TRNT1Q96Q11 434 aaKnown RBP6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 FEVQ99581 238 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 TM2D3Q9BRN9 247 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 FNDC11Q9BVV2 318 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 GABARAPL3Q9BY60 117 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 CCDC90BQ9GZT6 254 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 ARMC7Q9H6L4 198 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 BCL2L10Q9HD36 194 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 EQTNQ9NQ60 294 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 CES1P1Q9UKY3 287 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 ZNF232Q9UNY5 417 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 HIF3AQ9Y2N7 669 aa6.19□□□□□ -1.42
EXOSC3-206ENST00000489414 FAT4Q6V0I7 4981 aa6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 PTGES3LE9PB15 166 aa6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 MITFO75030 526 aaPredicted RBP6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 CDK2AP2O75956 126 aa6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 IFI6P09912 130 aa6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 CPMP14384 443 aa6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 JUNBP17275 347 aaPredicted RBP6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 TNFRSF1BP20333 461 aa6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 CD247P20963 164 aa6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 GALNSP34059 522 aa6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 GGT2P36268 569 aa6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 IFNGR2P38484 337 aa6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 ALDH3B1P43353 468 aa6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 YAP1P46937 504 aaKnown RBP6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 HMGA2P52926 109 aa6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 CRYBA2P53672 197 aa6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 PRPS1P60891 318 aa6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 ISL1P61371 349 aa6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 SEC61A1P61619 476 aaKnown RBP6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 RAC1P63000 192 aa6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 PAX2Q02962 417 aa6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 SYPL1Q16563 259 aa6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 DUSP7Q16829 419 aa6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 MSMPQ1L6U9 139 aa6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 PDSS1Q5T2R2 415 aa6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 CDC73Q6P1J9 531 aa6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 RRM2BQ7LG56 351 aa6.18□□□□□ -1.42
EXOSC3-206ENST00000489414 ERI1Q8IV48 349 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms