RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 SF3B5Q9BWJ5 86 aaKnown RBP17.11■□□□□ 0.33
CCM2-216ENST00000488727 FLVCR1Q9Y5Y0 555 aa17.11■□□□□ 0.33
CCM2-216ENST00000488727 FREM1Q5H8C1 2179 aa17.11■□□□□ 0.33
CCM2-216ENST00000488727 GCN1Q92616 2671 aaKnown RBP17.1■□□□□ 0.33
CCM2-216ENST00000488727 FABP12A6NFH5 140 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 ZNF724A8MTY0 619 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 VAMP5O95183 116 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 HLA-DOBP13765 273 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 APEHP13798 732 aaKnown RBP17.1■□□□□ 0.33
CCM2-216ENST00000488727 BMP5P22003 454 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 UQCRC1P31930 480 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 PUDPQ08623 228 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 POU4F3Q15319 338 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 MZT2AQ6P582 158 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 NUFIP2Q7Z417 695 aaKnown RBP17.1■□□□□ 0.33
CCM2-216ENST00000488727 MRGPRGQ86SM5 289 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 SYS1Q8N2H4 156 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 ZIC4Q8N9L1 334 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 RELL2Q8NC24 303 aaPredicted RBP17.1■□□□□ 0.33
CCM2-216ENST00000488727 OR4K13Q8NH42 304 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 ACOT12Q8WYK0 555 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 C4orf36Q96KX1 117 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 OXGR1Q96P68 337 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 ZNF385AQ96PM9 386 aaKnown RBP17.1■□□□□ 0.33
CCM2-216ENST00000488727 CNN2Q99439 309 aaKnown RBP17.1■□□□□ 0.33
CCM2-216ENST00000488727 SOSTQ9BQB4 213 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 SFXN3Q9BWM7 321 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 NMNAT2Q9BZQ4 307 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 COQ3Q9NZJ6 369 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 ZNF629Q9UEG4 869 aaPredicted RBP17.1■□□□□ 0.33
CCM2-216ENST00000488727 HIF3AQ9Y2N7 669 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 WIPF3A6NGB9 483 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 C11orf98E9PRG8 122 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 BLOC1S5-TXNDC5H3BN57 136 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 HIST1H2ABP04908 130 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 OR2T7P0C7T2 308 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 AHCYP23526 432 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 CHRNB4P30926 498 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 RPL18Q07020 188 aaKnown RBP17.1■□□□□ 0.33
CCM2-216ENST00000488727 BAK1Q16611 211 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 NHLRC1Q6VVB1 395 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 HIST3H2AQ7L7L0 130 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 NPEPL1Q8NDH3 523 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 OR2T27Q8NH04 317 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 MOSPD2Q8NHP6 518 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 HIST1H2ACQ93077 130 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 STARD4Q96DR4 205 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 FANCFQ9NPI8 374 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 EMC9Q9Y3B6 208 aa17.1■□□□□ 0.33
CCM2-216ENST00000488727 FASNP49327 2511 aaKnown RBP17.09■□□□□ 0.33
CCM2-216ENST00000488727 LOC102725191A0A1B0GVB3 256 aa17.09■□□□□ 0.33
CCM2-216ENST00000488727 SC5DO75845 299 aa17.09■□□□□ 0.33
CCM2-216ENST00000488727 IL18BPO95998 194 aa17.09■□□□□ 0.33
CCM2-216ENST00000488727 TFP02787 698 aa17.09■□□□□ 0.33
CCM2-216ENST00000488727 GYPBP06028 91 aa17.09■□□□□ 0.33
CCM2-216ENST00000488727 EDNRAP25101 427 aa17.09■□□□□ 0.33
CCM2-216ENST00000488727 OPRM1P35372 400 aa17.09■□□□□ 0.33
CCM2-216ENST00000488727 RPL4P36578 427 aaKnown RBP17.09■□□□□ 0.33
CCM2-216ENST00000488727 AQP2P41181 271 aa17.09■□□□□ 0.33
CCM2-216ENST00000488727 CAV3P56539 151 aa17.09■□□□□ 0.33
CCM2-216ENST00000488727 ACTA2P62736 377 aa17.09■□□□□ 0.33
CCM2-216ENST00000488727 ACTG2P63267 376 aa17.09■□□□□ 0.33
CCM2-216ENST00000488727 ZP4Q12836 540 aa17.09■□□□□ 0.33
CCM2-216ENST00000488727 ASAH1Q13510 395 aa17.09■□□□□ 0.33
CCM2-216ENST00000488727 RIN1Q13671 783 aa17.09■□□□□ 0.33
CCM2-216ENST00000488727 DMKNQ6E0U4 476 aaPredicted RBP17.09■□□□□ 0.33
CCM2-216ENST00000488727 CREB3L2Q70SY1 520 aa17.09■□□□□ 0.33
CCM2-216ENST00000488727 LRRC75AQ8NAA5 344 aa17.09■□□□□ 0.33
CCM2-216ENST00000488727 PGLYRP3Q96LB9 341 aa17.09■□□□□ 0.33
CCM2-216ENST00000488727 C12orf49Q9H741 205 aa17.09■□□□□ 0.33
CCM2-216ENST00000488727 EMC3Q9P0I2 261 aa17.09■□□□□ 0.33
CCM2-216ENST00000488727 GRIP1Q9Y3R0 1128 aa17.09■□□□□ 0.33
CCM2-216ENST00000488727 E9PI62 339 aa17.08■□□□□ 0.32
CCM2-216ENST00000488727 IMPA2O14732 288 aa17.08■□□□□ 0.32
CCM2-216ENST00000488727 TRAF3IP2O43734 574 aaPredicted RBP17.08■□□□□ 0.32
CCM2-216ENST00000488727 CGAP01215 116 aa17.08■□□□□ 0.32
CCM2-216ENST00000488727 CD1AP06126 327 aa17.08■□□□□ 0.32
CCM2-216ENST00000488727 ZNF43P17038 809 aa17.08■□□□□ 0.32
CCM2-216ENST00000488727 POU3F1Q03052 451 aaPredicted RBP17.08■□□□□ 0.32
CCM2-216ENST00000488727 SCN1BQ07699 218 aa17.08■□□□□ 0.32
CCM2-216ENST00000488727 INSL4Q14641 139 aa17.08■□□□□ 0.32
CCM2-216ENST00000488727 ARL9Q6T311 187 aa17.08■□□□□ 0.32
CCM2-216ENST00000488727 OR6K3Q8NGY3 331 aa17.08■□□□□ 0.32
CCM2-216ENST00000488727 ST6GALNAC2Q9UJ37 374 aa17.08■□□□□ 0.32
CCM2-216ENST00000488727 ADAM30Q9UKF2 790 aa17.08■□□□□ 0.32
CCM2-216ENST00000488727 CACNA1CQ13936 2221 aa17.08■□□□□ 0.32
CCM2-216ENST00000488727 ALPK2Q86TB3 2170 aa17.08■□□□□ 0.32
CCM2-216ENST00000488727 A0A1W2PQ09 198 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 SMIM30A4D0T7 59 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 J3QLW9 94 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 GPR171O14626 319 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 DVL2O14641 736 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 OGG1O15527 345 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 SERPINI2O75830 405 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 OR6A2O95222 327 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 ZNF19P17023 458 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 AZGP1P25311 298 aaKnown RBP17.07■□□□□ 0.32
CCM2-216ENST00000488727 OR12D2P58182 307 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 CDONQ4KMG0 1287 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 EEF1A1P5Q5VTE0 462 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms