RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 CAPN7Q9Y6W3 813 aa10.32□□□□□ -0.76
VPS16-208ENST00000487461 TMEM89A2RUT3 159 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 ISPDA4D126 451 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 CXCR6O00574 342 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 TIMM8AO60220 97 aaPredicted RBP10.31□□□□□ -0.76
VPS16-208ENST00000487461 PTP4A3O75365 173 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 ZNF682O95780 498 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 CD14P08571 375 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 COX5BP10606 129 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 ZFP36P26651 326 aaKnown RBP10.31□□□□□ -0.76
VPS16-208ENST00000487461 RPL4P36578 427 aaKnown RBP10.31□□□□□ -0.76
VPS16-208ENST00000487461 GPR4P46093 362 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 COMPP49747 757 aaPredicted RBP10.31□□□□□ -0.76
VPS16-208ENST00000487461 LCN2P80188 198 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 TNFAIP6P98066 277 aaPredicted RBP10.31□□□□□ -0.76
VPS16-208ENST00000487461 ZBED5Q49AG3 693 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 IFI44LQ53G44 452 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 MESTQ5EB52 335 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 OTPQ5XKR4 325 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 ARL9Q6T311 187 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 Q6ZR03 302 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 TMPRSS11FQ6ZWK6 438 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 FKBP9P1Q75LS8 142 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 CBLL1Q75N03 491 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 FAM122BQ7Z309 247 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 FAM156AQ8NDB6 213 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 RP9Q8TA86 221 aaKnown RBP10.31□□□□□ -0.76
VPS16-208ENST00000487461 NANPQ8TBE9 248 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 FAM216AQ8WUB2 273 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 CMBLQ96DG6 245 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 DCLRE1CQ96SD1 692 aaKnown RBP10.31□□□□□ -0.76
VPS16-208ENST00000487461 DIRC2Q96SL1 478 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 WACQ9BTA9 647 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 PLA2G12AQ9BZM1 189 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 TBCCD1Q9NVR7 557 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 CGGBP1Q9UFW8 167 aaPredicted RBP10.31□□□□□ -0.76
VPS16-208ENST00000487461 PURGQ9UJV8 347 aaKnown RBP10.31□□□□□ -0.76
VPS16-208ENST00000487461 NDRG4Q9ULP0 352 aaKnown RBP10.31□□□□□ -0.76
VPS16-208ENST00000487461 STARD10Q9Y365 291 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 NPTNQ9Y639 398 aa10.31□□□□□ -0.76
VPS16-208ENST00000487461 PRSS37A4D1T9 235 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 TRIM77I1YAP6 450 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 NME4O00746 187 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 IMPA2O14732 288 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 GSTA4O15217 222 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 SLC22A2O15244 555 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 AHCYL1O43865 530 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 ABHD16AO95870 558 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 SERPINA1P01009 418 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 IGHV2-70P01814 119 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 SBK2P0C263 348 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 COX4I1P13073 169 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 CTLA4P16410 223 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 GATA3P23771 443 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 ACTG1P63261 375 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 C8orf82Q6P1X6 216 aaPredicted RBP10.3□□□□□ -0.76
VPS16-208ENST00000487461 VASH1Q7L8A9 365 aaPredicted RBP10.3□□□□□ -0.76
VPS16-208ENST00000487461 ARPINQ7Z6K5 226 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 ZER1Q7Z7L7 766 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 SLC7A6Q92536 515 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 GCDHQ92947 438 aaPredicted RBP10.3□□□□□ -0.76
VPS16-208ENST00000487461 HAVCR1Q96D42 359 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 HSH2DQ96JZ2 352 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 SAMD8Q96LT4 415 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 SLC6A7Q99884 636 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 NMNAT1Q9HAN9 279 aaPredicted RBP10.3□□□□□ -0.76
VPS16-208ENST00000487461 ESM1Q9NQ30 184 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 MMP26Q9NRE1 261 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 TMEM106BQ9NUM4 274 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 EGFL7Q9UHF1 273 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 TENM1Q9UKZ4 2725 aa10.3□□□□□ -0.76
VPS16-208ENST00000487461 DYSFO75923 2080 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 XKRYO14609 159 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 SGCEO43556 437 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 DOK2O60496 412 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 FSHBP01225 129 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 NCK1P16333 377 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 GSTM3P21266 225 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 KITLGP21583 273 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 TUBG1P23258 451 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 HTR5AP47898 357 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 GSK3BP49841 420 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 SLC7A2P52569 658 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 GUCY1A3Q02108 690 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 SCRN3Q0VDG4 424 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 ZMAT1Q5H9K5 638 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 LRRC28Q86X40 367 aaPredicted RBP10.29□□□□□ -0.76
VPS16-208ENST00000487461 ZDHHC22Q8N966 263 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 NPEPL1Q8NDH3 523 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 OR2Z1Q8NG97 314 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 SLC7A13Q8TCU3 470 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 ST7LQ8TDW4 575 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 C22orf15Q8WYQ4 148 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 PTP4A1Q93096 173 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 RASD2Q96D21 266 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 FAM46AQ96IP4 442 aaKnown RBP10.29□□□□□ -0.76
VPS16-208ENST00000487461 ZNF570Q96NI8 536 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 HOPXQ9BPY8 73 aaPredicted RBP10.29□□□□□ -0.76
VPS16-208ENST00000487461 RBM4Q9BWF3 364 aaKnown RBP10.29□□□□□ -0.76
VPS16-208ENST00000487461 SUCNR1Q9BXA5 334 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms