RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 SCN3BQ9NY72 215 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 POLR1DQ9Y2S0 133 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 TPRKBQ9Y3C4 175 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 SLC25A15Q9Y619 301 aa8.36□□□□□ -1.07
MCF2L-227ENST00000486806 J3QKU1 62 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 PHYHO14832 338 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 RER1O15258 196 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 TNFAIP8O95379 198 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 IGKV3-15P01624 115 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 LYNP07948 512 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 PATE4P0C8F1 98 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 ZNF32P17041 273 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 DCKP27707 260 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 GRNP28799 593 aaKnown RBP8.35□□□□□ -1.07
MCF2L-227ENST00000486806 C21orf33P30042 268 aaPredicted RBP8.35□□□□□ -1.07
MCF2L-227ENST00000486806 HOXC12P31275 282 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 ATP6V1E1P36543 226 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 HCCSP53701 268 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 UBE2NP61088 152 aaKnown RBP8.35□□□□□ -1.07
MCF2L-227ENST00000486806 PCBD1P61457 104 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 TUBA1BP68363 451 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 TUBA4AP68366 448 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 PSG4Q00888 419 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 ZNF85Q03923 595 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 SCRN3Q0VDG4 424 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 ST3GAL4Q11206 333 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 EIF2B1Q14232 305 aaKnown RBP8.35□□□□□ -1.07
MCF2L-227ENST00000486806 SLC36A2Q495M3 483 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 CCDC92Q53HC0 331 aaPredicted RBP8.35□□□□□ -1.07
MCF2L-227ENST00000486806 ZNF684Q5T5D7 378 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 RNLSQ5VYX0 342 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 C22orf34Q6ZV56 151 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 TUBA1AQ71U36 451 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 DCXRQ7Z4W1 244 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 MDP1Q86V88 176 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 P2RY8Q86VZ1 359 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 ACBD7Q8N6N7 88 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 OR10H4Q8NGA5 316 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 OR52N5Q8NH56 324 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 RNF133Q8WVZ7 376 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 TMEM80Q96HE8 168 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 ABHD6Q9BV23 337 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 CDCA4Q9BXL8 241 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 OR2H1Q9GZK4 316 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 WNT5BQ9H1J7 359 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 C1orf198Q9H425 327 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 CCNB1IP1Q9NPC3 277 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 CRNNQ9UBG3 495 aaPredicted RBP8.35□□□□□ -1.07
MCF2L-227ENST00000486806 ATPIF1Q9UII2 106 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 LAMP5Q9UJQ1 280 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 AMDHD2Q9Y303 409 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 PCDHGB1Q9Y5G3 927 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 TMEM14AQ9Y6G1 99 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 INTS1Q8N201 2190 aaKnown RBP8.35□□□□□ -1.07
MCF2L-227ENST00000486806 ESPL1Q14674 2120 aa8.35□□□□□ -1.07
MCF2L-227ENST00000486806 HIVEP3Q5T1R4 2406 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 A0A1W2PR80 420 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 OR6C6A6NF89 314 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 PTGES3LE9PB15 166 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 ZNF670-ZNF695F2Z2N8 137 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 RGS10O43665 173 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 SYNGR3O43761 229 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 MRPS14O60783 128 aaKnown RBP8.34□□□□□ -1.07
MCF2L-227ENST00000486806 TMCC2O75069 709 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 ABHD16AO95870 558 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 IGLV1-44P01699 117 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 LIMS3P0CW19 117 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 LIMS4P0CW20 117 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 CD79AP11912 226 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 PPP3CBP16298 524 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 ARR3P36575 388 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 OPRL1P41146 370 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 ROM1Q03395 351 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 EGR3Q06889 387 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 PIGFQ07326 219 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 GALEQ14376 348 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 IRF3Q14653 427 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 RAB35Q15286 201 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 TAB1Q15750 504 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 GSG1Q2KHT4 349 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 KRTAP27-1Q3LI81 207 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 CDONQ4KMG0 1287 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 ZNF322Q6U7Q0 402 aaPredicted RBP8.34□□□□□ -1.07
MCF2L-227ENST00000486806 RHOUQ7L0Q8 258 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 VASH1Q7L8A9 365 aaPredicted RBP8.34□□□□□ -1.07
MCF2L-227ENST00000486806 SSX8Q7RTT4 187 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 PRSS48Q7RTY5 328 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 ZNF584Q8IVC4 421 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 STX19Q8N4C7 294 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 FAM169BQ8N8A8 192 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 GJC3Q8NFK1 279 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 OR2AJ1Q8NGZ0 328 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 ASB17Q8WXJ9 295 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 MYDGFQ969H8 173 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 SLAMF6Q96DU3 332 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 LRRC46Q96FV0 321 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 OR8B4Q96RC9 309 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 TBX5Q99593 518 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 CDADC1Q9BWV3 514 aa8.34□□□□□ -1.07
MCF2L-227ENST00000486806 HDHD2Q9H0R4 259 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms