RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 DDX28Q9NUL7 540 aaKnown RBP10.63□□□□□ -0.71
PKP4-213ENST00000486254 FAM206AQ9NX38 181 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 GLTPQ9NZD2 209 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 COPZ2Q9P299 210 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 MALT1Q9UDY8 824 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 STEAP1Q9UHE8 339 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 NUFIP1Q9UHK0 495 aaKnown RBP10.63□□□□□ -0.71
PKP4-213ENST00000486254 FOXD3Q9UJU5 478 aaPredicted RBP10.63□□□□□ -0.71
PKP4-213ENST00000486254 OR52A1Q9UKL2 312 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 LHFPL6Q9Y693 200 aa10.63□□□□□ -0.71
PKP4-213ENST00000486254 TRAV8-7A0A075B6U6 113 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 A0A1B0GTH9 108 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 TMEM269A0A1B0GVZ9 245 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 LOC390937A0A1W2PQ73 354 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 BOLA2-SMG1P6H3BVE0 249 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 SLC17A2O00624 439 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 MPZL1O95297 269 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 WNT11O96014 354 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 KIR2DL3P43628 341 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 CSNK1A1P48729 337 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 CLDN20P56880 219 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 FOXO1Q12778 655 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 CAMK2DQ13557 499 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 TRIP6Q15654 476 aaKnown RBP10.62□□□□□ -0.71
PKP4-213ENST00000486254 BCL2L15Q5TBC7 163 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 ABHD17BQ5VST6 288 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 ABLIM2Q6H8Q1 611 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 KLHL24Q6TFL4 600 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 IGF2-ASQ6U949 168 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 DNM1P46Q6ZS02 220 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.62□□□□□ -0.71
PKP4-213ENST00000486254 ZNF433Q8N7K0 673 aaPredicted RBP10.62□□□□□ -0.71
PKP4-213ENST00000486254 OR9K2Q8NGE7 335 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 OR51A4Q8NGJ6 313 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 OR10AC1Q8NH08 325 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 YIPF5Q969M3 257 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 ADGRG7Q96K78 797 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 FER1L6-AS2Q96M78 137 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 OR2M2Q96R28 347 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 FAM173AQ9BQD7 235 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 OR5V1Q9UGF6 321 aa10.62□□□□□ -0.71
PKP4-213ENST00000486254 GDF2Q9UK05 429 aaPredicted RBP10.62□□□□□ -0.71
PKP4-213ENST00000486254 RBMX2Q9Y388 322 aaKnown RBP10.62□□□□□ -0.71
PKP4-213ENST00000486254 A0A0J9YW62 118 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 LOC107986453A0A1B0GWG9 222 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 NPIPA2E9PIF3 369 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 NPIPA3F8WFD2 350 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 GABARAPH6UMI1 98 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 RAMP1O60894 148 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 QDPRP09417 244 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 HLA-DMAP28067 261 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 SOX2P48431 317 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 DNASE1L1P49184 302 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 ART1P52961 327 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 RAG2P55895 527 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 SOX8P57073 446 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 BTG1P62324 171 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 GRB2P62993 217 aaKnown RBP10.61□□□□□ -0.71
PKP4-213ENST00000486254 CCDC157Q569K6 752 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 B3GNTL1Q67FW5 361 aaPredicted RBP10.61□□□□□ -0.71
PKP4-213ENST00000486254 LRFN4Q6PJG9 635 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 DHRS13Q6UX07 377 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 GGNQ86UU5 652 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 TMPRSS12Q86WS5 348 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 CMTM4Q8IZR5 234 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 OR10S1Q8NGN2 331 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 OR2AJ1Q8NGZ0 328 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 PTX4Q96A99 478 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 FOXRED1Q96CU9 486 aaPredicted RBP10.61□□□□□ -0.71
PKP4-213ENST00000486254 S100A16Q96FQ6 103 aaKnown RBP10.61□□□□□ -0.71
PKP4-213ENST00000486254 THOC3Q96J01 351 aaKnown RBP10.61□□□□□ -0.71
PKP4-213ENST00000486254 NEDD4LQ96PU5 975 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 NELFAQ9H3P2 528 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 B4GALT7Q9UBV7 327 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 SLC22A13Q9Y226 551 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 EMC9Q9Y3B6 208 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 MUC3AQ02505 3323 aa10.61□□□□□ -0.71
PKP4-213ENST00000486254 A0A087WV48 116 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 A0A0A6YYH2 397 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 FAM240BA0A1B0GVZ2 78 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 MEIOCA2RUB1 952 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 A6NJ64 397 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 CENPXA8MT69 81 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 TNFSF15O95150 251 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 ECDO95905 644 aaPredicted RBP10.6□□□□□ -0.71
PKP4-213ENST00000486254 HPNP05981 417 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 MSR1P21757 451 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 CCL1P22362 96 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 GFRA1P56159 465 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 CLDN17P56750 224 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 AP3S2P59780 193 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 HIST1H3AP68431 136 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 GABREP78334 506 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 STK11Q15831 433 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 HES5Q5TA89 166 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 RIPPLY2Q5TAB7 128 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 HIST2H3PS2Q5TEC6 136 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 GLT8D1Q68CQ7 371 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 ASPHD2Q6ICH7 369 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 HIST2H3AQ71DI3 136 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms