RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 HTR5AP47898 357 aa10.24□□□□□ -0.77
HPS4-214ENST00000485842 GDI2P50395 445 aaKnown RBP10.24□□□□□ -0.77
HPS4-214ENST00000485842 RPS7P62081 194 aaKnown RBP10.24□□□□□ -0.77
HPS4-214ENST00000485842 ADAM8P78325 824 aa10.24□□□□□ -0.77
HPS4-214ENST00000485842 RCN1Q15293 331 aa10.24□□□□□ -0.77
HPS4-214ENST00000485842 KLHL12Q53G59 568 aa10.24□□□□□ -0.77
HPS4-214ENST00000485842 AGAP6Q5VW22 663 aa10.24□□□□□ -0.77
HPS4-214ENST00000485842 SLX4IPQ5VYV7 408 aa10.24□□□□□ -0.77
HPS4-214ENST00000485842 ZNF544Q6NX49 715 aa10.24□□□□□ -0.77
HPS4-214ENST00000485842 TMEM154Q6P9G4 183 aa10.24□□□□□ -0.77
HPS4-214ENST00000485842 CORO6Q6QEF8 472 aa10.24□□□□□ -0.77
HPS4-214ENST00000485842 CXXC5Q7LFL8 322 aaKnown RBP10.24□□□□□ -0.77
HPS4-214ENST00000485842 SYT9Q86SS6 491 aa10.24□□□□□ -0.77
HPS4-214ENST00000485842 CPOQ8IVL8 374 aa10.24□□□□□ -0.77
HPS4-214ENST00000485842 MUC15Q8N387 334 aa10.24□□□□□ -0.77
HPS4-214ENST00000485842 ZNF511Q8NB15 262 aa10.24□□□□□ -0.77
HPS4-214ENST00000485842 NUP37Q8NFH4 326 aa10.24□□□□□ -0.77
HPS4-214ENST00000485842 PIGTQ969N2 578 aa10.24□□□□□ -0.77
HPS4-214ENST00000485842 WACQ9BTA9 647 aa10.24□□□□□ -0.77
HPS4-214ENST00000485842 CDADC1Q9BWV3 514 aa10.24□□□□□ -0.77
HPS4-214ENST00000485842 PRRG3Q9BZD7 231 aa10.24□□□□□ -0.77
HPS4-214ENST00000485842 HINT3Q9NQE9 182 aaKnown RBP10.24□□□□□ -0.77
HPS4-214ENST00000485842 CA10Q9NS85 328 aa10.24□□□□□ -0.77
HPS4-214ENST00000485842 SPEF1Q9Y4P9 236 aa10.24□□□□□ -0.77
HPS4-214ENST00000485842 COMMD3-BMI1R4GMX3 469 aa10.24□□□□□ -0.77
HPS4-214ENST00000485842 LOC100509620A0A075B734 347 aa10.23□□□□□ -0.77
HPS4-214ENST00000485842 ZAR1LA6NP61 321 aa10.23□□□□□ -0.77
HPS4-214ENST00000485842 GPRIN2O60269 458 aa10.23□□□□□ -0.77
HPS4-214ENST00000485842 SMPD2O60906 423 aa10.23□□□□□ -0.77
HPS4-214ENST00000485842 ALPLP05186 524 aa10.23□□□□□ -0.77
HPS4-214ENST00000485842 SPARCP09486 303 aa10.23□□□□□ -0.77
HPS4-214ENST00000485842 NR4A1P22736 598 aa10.23□□□□□ -0.77
HPS4-214ENST00000485842 APOBEC3AP31941 199 aaPredicted RBP10.23□□□□□ -0.77
HPS4-214ENST00000485842 THBS4P35443 961 aa10.23□□□□□ -0.77
HPS4-214ENST00000485842 POLR2IP36954 125 aaKnown RBP10.23□□□□□ -0.77
HPS4-214ENST00000485842 CDKN1AP38936 164 aa10.23□□□□□ -0.77
HPS4-214ENST00000485842 RPS27P42677 84 aaKnown RBP10.23□□□□□ -0.77
HPS4-214ENST00000485842 ALDH3A2P51648 485 aa10.23□□□□□ -0.77
HPS4-214ENST00000485842 ART1P52961 327 aa10.23□□□□□ -0.77
HPS4-214ENST00000485842 RAD23AP54725 363 aa10.23□□□□□ -0.77
HPS4-214ENST00000485842 NKX6-1P78426 367 aaPredicted RBP10.23□□□□□ -0.77
HPS4-214ENST00000485842 RAB35Q15286 201 aa10.23□□□□□ -0.77
HPS4-214ENST00000485842 DEFB113Q30KQ7 82 aa10.23□□□□□ -0.77
HPS4-214ENST00000485842 ZIK1Q3SY52 487 aaPredicted RBP10.23□□□□□ -0.77
HPS4-214ENST00000485842 VASH1Q7L8A9 365 aaPredicted RBP10.23□□□□□ -0.77
HPS4-214ENST00000485842 DTX2Q86UW9 622 aa10.23□□□□□ -0.77
HPS4-214ENST00000485842 TCEANCQ8N8B7 351 aa10.23□□□□□ -0.77
HPS4-214ENST00000485842 BBS1Q8NFJ9 593 aa10.23□□□□□ -0.77
HPS4-214ENST00000485842 OR2AJ1Q8NGZ0 328 aa10.23□□□□□ -0.77
HPS4-214ENST00000485842 EME1Q96AY2 570 aa10.23□□□□□ -0.77
HPS4-214ENST00000485842 ZMYND19Q96E35 227 aaPredicted RBP10.23□□□□□ -0.77
HPS4-214ENST00000485842 POM121L2Q96KW2 1035 aa10.23□□□□□ -0.77
HPS4-214ENST00000485842 TRAF4Q9BUZ4 470 aaPredicted RBP10.23□□□□□ -0.77
HPS4-214ENST00000485842 GABARAPL3Q9BY60 117 aa10.23□□□□□ -0.77
HPS4-214ENST00000485842 GRIP2Q9C0E4 1043 aa10.23□□□□□ -0.77
HPS4-214ENST00000485842 CXorf56Q9H5V9 222 aa10.23□□□□□ -0.77
HPS4-214ENST00000485842 WDR76Q9H967 626 aa10.23□□□□□ -0.77
HPS4-214ENST00000485842 USE1Q9NZ43 259 aa10.23□□□□□ -0.77
HPS4-214ENST00000485842 NDRG4Q9ULP0 352 aaKnown RBP10.23□□□□□ -0.77
HPS4-214ENST00000485842 CCDC168Q8NDH2 2452 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 PRKYO43930 277 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 GLCEO94923 617 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 SNAP29O95721 258 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 CD8AP01732 235 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 LCKP06239 509 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 OR4A8P0C604 315 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 ANPEPP15144 967 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 ENTPD1P49961 510 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 ERVS71-1P61550 626 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 RPS23P62266 143 aaKnown RBP10.22□□□□□ -0.77
HPS4-214ENST00000485842 TRIP10Q15642 601 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 ADIPOQQ15848 244 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 CCDC92Q53HC0 331 aaPredicted RBP10.22□□□□□ -0.77
HPS4-214ENST00000485842 LINC01590Q5TEZ4 76 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 C12orf73Q69YU5 71 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 SLC18B1Q6NT16 456 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 CFAP77Q6ZQR2 320 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 ZBTB49Q6ZSB9 765 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 ERI1Q8IV48 349 aaKnown RBP10.22□□□□□ -0.77
HPS4-214ENST00000485842 GJC3Q8NFK1 279 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 OR6N2Q8NGY6 317 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 OR1F12Q8NHA8 337 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 SLC7A6Q92536 515 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 PTP4A1Q93096 173 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 PERPQ96FX8 193 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 IL4I1Q96RQ9 567 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 INTS14Q96SY0 518 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 PITX2Q99697 317 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 HDHD2Q9H0R4 259 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 ZNF442Q9H7R0 627 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 CBLN4Q9NTU7 201 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 BEX4Q9NWD9 120 aaPredicted RBP10.22□□□□□ -0.77
HPS4-214ENST00000485842 EIF3KQ9UBQ5 218 aaKnown RBP10.22□□□□□ -0.77
HPS4-214ENST00000485842 KCNG2Q9UJ96 466 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 GDF2Q9UK05 429 aaPredicted RBP10.22□□□□□ -0.77
HPS4-214ENST00000485842 FZR1Q9UM11 496 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 MAST4O15021 2626 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 TEX15Q9BXT5 2789 aa10.22□□□□□ -0.77
HPS4-214ENST00000485842 RTTNQ86VV8 2226 aa10.21□□□□□ -0.77
HPS4-214ENST00000485842 OR6C6A6NF89 314 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms