RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 CCDC22O60826 627 aa11.25□□□□□ -0.61
UBA3-210ENST00000485424 GMNNO75496 209 aa11.25□□□□□ -0.61
UBA3-210ENST00000485424 SERPINA1P01009 418 aa11.25□□□□□ -0.61
UBA3-210ENST00000485424 IGHV2-5P01817 119 aa11.25□□□□□ -0.61
UBA3-210ENST00000485424 EPHA1P21709 976 aa11.25□□□□□ -0.61
UBA3-210ENST00000485424 GPR4P46093 362 aa11.25□□□□□ -0.61
UBA3-210ENST00000485424 HTR5AP47898 357 aa11.25□□□□□ -0.61
UBA3-210ENST00000485424 MMP15P51511 669 aa11.25□□□□□ -0.61
UBA3-210ENST00000485424 LCN6P62502 163 aa11.25□□□□□ -0.61
UBA3-210ENST00000485424 TNFAIP6P98066 277 aaPredicted RBP11.25□□□□□ -0.61
UBA3-210ENST00000485424 ZBED5Q49AG3 693 aa11.25□□□□□ -0.61
UBA3-210ENST00000485424 MTX3Q5HYI7 312 aa11.25□□□□□ -0.61
UBA3-210ENST00000485424 RFPL4BQ6ZWI9 263 aa11.25□□□□□ -0.61
UBA3-210ENST00000485424 MBOAT2Q6ZWT7 520 aa11.25□□□□□ -0.61
UBA3-210ENST00000485424 CBLL1Q75N03 491 aa11.25□□□□□ -0.61
UBA3-210ENST00000485424 NANPQ8TBE9 248 aa11.25□□□□□ -0.61
UBA3-210ENST00000485424 NMD3Q96D46 503 aaKnown RBP11.25□□□□□ -0.61
UBA3-210ENST00000485424 HSH2DQ96JZ2 352 aa11.25□□□□□ -0.61
UBA3-210ENST00000485424 COG8Q96MW5 612 aa11.25□□□□□ -0.61
UBA3-210ENST00000485424 HOPXQ9BPY8 73 aaPredicted RBP11.25□□□□□ -0.61
UBA3-210ENST00000485424 EFCAB1Q9HAE3 211 aa11.25□□□□□ -0.61
UBA3-210ENST00000485424 POLE4Q9NR33 117 aa11.25□□□□□ -0.61
UBA3-210ENST00000485424 CMTM6Q9NX76 183 aa11.25□□□□□ -0.61
UBA3-210ENST00000485424 PLEK2Q9NYT0 353 aa11.25□□□□□ -0.61
UBA3-210ENST00000485424 RPS6KA6Q9UK32 745 aa11.25□□□□□ -0.61
UBA3-210ENST00000485424 AURKCQ9UQB9 309 aa11.25□□□□□ -0.61
UBA3-210ENST00000485424 POLR1DQ9Y2S0 133 aa11.25□□□□□ -0.61
UBA3-210ENST00000485424 CACNG2Q9Y698 323 aa11.25□□□□□ -0.61
UBA3-210ENST00000485424 SGCEO43556 437 aa11.24□□□□□ -0.61
UBA3-210ENST00000485424 SPRY1O43609 319 aaPredicted RBP11.24□□□□□ -0.61
UBA3-210ENST00000485424 CD14P08571 375 aa11.24□□□□□ -0.61
UBA3-210ENST00000485424 COX5BP10606 129 aa11.24□□□□□ -0.61
UBA3-210ENST00000485424 COX4I1P13073 169 aa11.24□□□□□ -0.61
UBA3-210ENST00000485424 TNFRSF1AP19438 455 aa11.24□□□□□ -0.61
UBA3-210ENST00000485424 TUBG1P23258 451 aa11.24□□□□□ -0.61
UBA3-210ENST00000485424 GATA3P23771 443 aa11.24□□□□□ -0.61
UBA3-210ENST00000485424 COMPP49747 757 aaPredicted RBP11.24□□□□□ -0.61
UBA3-210ENST00000485424 NUDT2P50583 147 aa11.24□□□□□ -0.61
UBA3-210ENST00000485424 SLC7A2P52569 658 aa11.24□□□□□ -0.61
UBA3-210ENST00000485424 GUCY1A3Q02108 690 aa11.24□□□□□ -0.61
UBA3-210ENST00000485424 KRT72Q14CN4 511 aa11.24□□□□□ -0.61
UBA3-210ENST00000485424 FGD3Q5JSP0 725 aa11.24□□□□□ -0.61
UBA3-210ENST00000485424 CGB2Q6NT52 195 aa11.24□□□□□ -0.61
UBA3-210ENST00000485424 C1orf229Q6ZS94 237 aaPredicted RBP11.24□□□□□ -0.61
UBA3-210ENST00000485424 FOXL2NBQ6ZUU3 175 aa11.24□□□□□ -0.61
UBA3-210ENST00000485424 BPIFB2Q8N4F0 458 aa11.24□□□□□ -0.61
UBA3-210ENST00000485424 LRRC75AQ8NAA5 344 aa11.24□□□□□ -0.61
UBA3-210ENST00000485424 DCLRE1CQ96SD1 692 aaKnown RBP11.24□□□□□ -0.61
UBA3-210ENST00000485424 KCTD14Q9BQ13 255 aaPredicted RBP11.24□□□□□ -0.61
UBA3-210ENST00000485424 SUCNR1Q9BXA5 334 aa11.24□□□□□ -0.61
UBA3-210ENST00000485424 MSL2Q9HCI7 577 aa11.24□□□□□ -0.61
UBA3-210ENST00000485424 EMC7Q9NPA0 242 aa11.24□□□□□ -0.61
UBA3-210ENST00000485424 TUBG2Q9NRH3 451 aa11.24□□□□□ -0.61
UBA3-210ENST00000485424 SNX13Q9Y5W8 968 aa11.24□□□□□ -0.61
UBA3-210ENST00000485424 A0A087WUU8 490 aa11.23□□□□□ -0.61
UBA3-210ENST00000485424 ZSCAN5BA6NJL1 495 aa11.23□□□□□ -0.61
UBA3-210ENST00000485424 SURF4O15260 269 aa11.23□□□□□ -0.61
UBA3-210ENST00000485424 AHCYL1O43865 530 aa11.23□□□□□ -0.61
UBA3-210ENST00000485424 FOXH1O75593 365 aa11.23□□□□□ -0.61
UBA3-210ENST00000485424 NGFP01138 241 aa11.23□□□□□ -0.61
UBA3-210ENST00000485424 SBK2P0C263 348 aa11.23□□□□□ -0.61
UBA3-210ENST00000485424 CENPAP49450 140 aa11.23□□□□□ -0.61
UBA3-210ENST00000485424 HILS1P60008 231 aa11.23□□□□□ -0.61
UBA3-210ENST00000485424 LCN2P80188 198 aa11.23□□□□□ -0.61
UBA3-210ENST00000485424 AQP6Q13520 282 aa11.23□□□□□ -0.61
UBA3-210ENST00000485424 KRR1Q13601 381 aaKnown RBP11.23□□□□□ -0.61
UBA3-210ENST00000485424 ENDOGQ14249 297 aaKnown RBP11.23□□□□□ -0.61
UBA3-210ENST00000485424 C1orf94Q6P1W5 598 aa11.23□□□□□ -0.61
UBA3-210ENST00000485424 TBPL2Q6SJ96 375 aa11.23□□□□□ -0.61
UBA3-210ENST00000485424 C1QL2Q7Z5L3 287 aa11.23□□□□□ -0.61
UBA3-210ENST00000485424 SLC15A3Q8IY34 581 aa11.23□□□□□ -0.61
UBA3-210ENST00000485424 KLHL36Q8N4N3 616 aa11.23□□□□□ -0.61
UBA3-210ENST00000485424 OR2Z1Q8NG97 314 aa11.23□□□□□ -0.61
UBA3-210ENST00000485424 GCDHQ92947 438 aaPredicted RBP11.23□□□□□ -0.61
UBA3-210ENST00000485424 FAM46AQ96IP4 442 aaKnown RBP11.23□□□□□ -0.61
UBA3-210ENST00000485424 Q96M85 177 aa11.23□□□□□ -0.61
UBA3-210ENST00000485424 RBM4Q9BWF3 364 aaKnown RBP11.23□□□□□ -0.61
UBA3-210ENST00000485424 ANKRD19PQ9H560 264 aa11.23□□□□□ -0.61
UBA3-210ENST00000485424 C7orf69Q9H7B7 122 aa11.23□□□□□ -0.61
UBA3-210ENST00000485424 G6PC2Q9NQR9 355 aa11.23□□□□□ -0.61
UBA3-210ENST00000485424 MAN2C1Q9NTJ4 1040 aa11.23□□□□□ -0.61
UBA3-210ENST00000485424 TBCCD1Q9NVR7 557 aa11.23□□□□□ -0.61
UBA3-210ENST00000485424 ADAM18Q9Y3Q7 739 aa11.23□□□□□ -0.61
UBA3-210ENST00000485424 NPTNQ9Y639 398 aa11.23□□□□□ -0.61
UBA3-210ENST00000485424 TEX13CA0A0J9YWL9 993 aa11.22□□□□□ -0.61
UBA3-210ENST00000485424 PRSS37A4D1T9 235 aa11.22□□□□□ -0.61
UBA3-210ENST00000485424 C3orf80F5H4A9 247 aa11.22□□□□□ -0.61
UBA3-210ENST00000485424 NME4O00746 187 aa11.22□□□□□ -0.61
UBA3-210ENST00000485424 SLC16A7O60669 478 aa11.22□□□□□ -0.61
UBA3-210ENST00000485424 ICMTO60725 284 aa11.22□□□□□ -0.61
UBA3-210ENST00000485424 DEAF1O75398 565 aaPredicted RBP11.22□□□□□ -0.61
UBA3-210ENST00000485424 KHDRBS3O75525 346 aaKnown RBP11.22□□□□□ -0.61
UBA3-210ENST00000485424 UBOX5O94941 541 aa11.22□□□□□ -0.61
UBA3-210ENST00000485424 NDUFB2O95178 105 aa11.22□□□□□ -0.61
UBA3-210ENST00000485424 AVPP01185 164 aa11.22□□□□□ -0.61
UBA3-210ENST00000485424 H1F0P07305 194 aaKnown RBP11.22□□□□□ -0.61
UBA3-210ENST00000485424 CD55P08174 381 aa11.22□□□□□ -0.61
UBA3-210ENST00000485424 ADH4P08319 380 aa11.22□□□□□ -0.61
UBA3-210ENST00000485424 FPR2P25090 351 aa11.22□□□□□ -0.61
UBA3-210ENST00000485424 SDHAP31040 664 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms