RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 RGCCQ9H4X1 137 aa8.37□□□□□ -1.07
USP16-206ENST00000485067 HRASLS2Q9NWW9 162 aa8.37□□□□□ -1.07
USP16-206ENST00000485067 PLEK2Q9NYT0 353 aa8.37□□□□□ -1.07
USP16-206ENST00000485067 C10orf142B7Z368 130 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 TRDCB7Z8K6 153 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 BHLHE40O14503 412 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 CDC42EP2O14613 210 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 SUSD5O60279 629 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 LDB3O75112 727 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 SEMA4FO95754 770 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 MT-ND5P03915 603 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 CTSBP07858 339 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 SLC35E2P0CK97 266 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 HTR2AP28223 471 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 MAS1LP35410 378 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 LSSP48449 732 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 CTBP2P56545 445 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 MGAT2Q10469 447 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 ZNF155Q12901 538 aaPredicted RBP8.36□□□□□ -1.07
USP16-206ENST00000485067 MAB21L1Q13394 359 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 MAPK14Q16539 360 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 HAGHLQ6PII5 290 aaPredicted RBP8.36□□□□□ -1.07
USP16-206ENST00000485067 ZNF322Q6U7Q0 402 aaPredicted RBP8.36□□□□□ -1.07
USP16-206ENST00000485067 ARIH2OSQ8N7S6 290 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 CYB561A3Q8NBI2 242 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 OR13H1Q8NG92 308 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 OR4F15Q8NGB8 312 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 FAM222BQ8WU58 562 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 RAB3CQ96E17 227 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 DIRAS2Q96HU8 199 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 CNN2Q99439 309 aaKnown RBP8.36□□□□□ -1.07
USP16-206ENST00000485067 CCDC3Q9BQI4 270 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 ZNF649Q9BS31 505 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 NDUFAF3Q9BU61 184 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 TPPP3Q9BW30 176 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 TMEM27Q9HBJ8 222 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 HINT3Q9NQE9 182 aaKnown RBP8.36□□□□□ -1.07
USP16-206ENST00000485067 PGPEP1Q9NXJ5 209 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 LRFN1Q9P244 771 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 NUFIP1Q9UHK0 495 aaKnown RBP8.36□□□□□ -1.07
USP16-206ENST00000485067 MUTYHQ9UIF7 546 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 FBXL2Q9UKC9 423 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 MED31Q9Y3C7 131 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 MTCH2Q9Y6C9 303 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 ZNF860A6NHJ4 632 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 C1orf196B1AJZ1 125 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 TP53I11O14683 189 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 CASKO14936 926 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 HCRTR1O43613 425 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 NKX2-2O95096 273 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 LYPD3O95274 346 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 IL2RAP01589 272 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 FOLR2P14207 255 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 ARSBP15848 533 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 HLA-DMAP28067 261 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 GABRA3P34903 492 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 RBM34P42696 430 aaKnown RBP8.36□□□□□ -1.07
USP16-206ENST00000485067 SHC2P98077 582 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 EXOSC2Q13868 293 aaKnown RBP8.36□□□□□ -1.07
USP16-206ENST00000485067 AMZ1Q400G9 498 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 RGS7BPQ6MZT1 257 aaPredicted RBP8.36□□□□□ -1.07
USP16-206ENST00000485067 NIPAL3Q6P499 406 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 SMARCD3Q6STE5 483 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 BTNL3Q6UXE8 466 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 PRSS41Q7RTY9 318 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 DEFB119Q8N690 84 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 ACBD7Q8N6N7 88 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 DUSP19Q8WTR2 217 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 RAB1CQ92928 201 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 BPIFA2Q96DR5 249 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 DPH1Q9BZG8 443 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 CLEC4MQ9H2X3 399 aaPredicted RBP8.36□□□□□ -1.07
USP16-206ENST00000485067 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.36□□□□□ -1.07
USP16-206ENST00000485067 CMC2Q9NRP2 79 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 FBXL3Q9UKT7 428 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 MMP17Q9ULZ9 603 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 RHBDD3Q9Y3P4 386 aa8.36□□□□□ -1.07
USP16-206ENST00000485067 TBL2Q9Y4P3 447 aaKnown RBP8.36□□□□□ -1.07
USP16-206ENST00000485067 CENPVL1A0A0U1RR11 272 aa8.35□□□□□ -1.07
USP16-206ENST00000485067 METTL12A8MUP2 240 aa8.35□□□□□ -1.07
USP16-206ENST00000485067 HCN1O60741 890 aa8.35□□□□□ -1.07
USP16-206ENST00000485067 OR2J2O76002 312 aa8.35□□□□□ -1.07
USP16-206ENST00000485067 IGHV4-34P06331 123 aa8.35□□□□□ -1.07
USP16-206ENST00000485067 FGF2P09038 288 aa8.35□□□□□ -1.07
USP16-206ENST00000485067 ZGLP1P0C6A0 271 aa8.35□□□□□ -1.07
USP16-206ENST00000485067 PSMB10P40306 273 aa8.35□□□□□ -1.07
USP16-206ENST00000485067 CD200P41217 278 aa8.35□□□□□ -1.07
USP16-206ENST00000485067 ID2Q02363 134 aa8.35□□□□□ -1.07
USP16-206ENST00000485067 C1orf61Q13536 156 aa8.35□□□□□ -1.07
USP16-206ENST00000485067 PLEKHN1Q494U1 663 aaPredicted RBP8.35□□□□□ -1.07
USP16-206ENST00000485067 NCMAPQ5T1S8 102 aa8.35□□□□□ -1.07
USP16-206ENST00000485067 UNQ6494/PRO21346Q6UXR6 183 aa8.35□□□□□ -1.07
USP16-206ENST00000485067 NRARPQ7Z6K4 114 aa8.35□□□□□ -1.07
USP16-206ENST00000485067 ATP6V1C2Q8NEY4 427 aa8.35□□□□□ -1.07
USP16-206ENST00000485067 SPRYD4Q8WW59 207 aaPredicted RBP8.35□□□□□ -1.07
USP16-206ENST00000485067 ACOT12Q8WYK0 555 aa8.35□□□□□ -1.07
USP16-206ENST00000485067 ERGIC1Q969X5 290 aa8.35□□□□□ -1.07
USP16-206ENST00000485067 ANKRD9Q96BM1 317 aaPredicted RBP8.35□□□□□ -1.07
USP16-206ENST00000485067 C3orf49Q96BT1 292 aa8.35□□□□□ -1.07
USP16-206ENST00000485067 LRRC46Q96FV0 321 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms