RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 RGS5O15539 181 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 GPRIN2O60269 458 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 ZIC3O60481 467 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 SELENOFO60613 162 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 LALBAP00709 142 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 TFP02787 698 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 CD1AP06126 327 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 NR2C1P13056 603 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 ZNF823P16415 610 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 ZNF12P17014 697 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 ZNF17P17021 662 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 IL11P20809 199 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 BMP5P22003 454 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 SHC1P29353 583 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 CD40LGP29965 261 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 SDC2P34741 201 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 RPS19P39019 145 aaKnown RBP6.15□□□□□ -1.43
BRCA1-216ENST00000484087 LHX2P50458 406 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 SUCLG1P53597 346 aaKnown RBP6.15□□□□□ -1.43
BRCA1-216ENST00000484087 GFRA1P56159 465 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 CLDN15P56746 228 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 CLDN20P56880 219 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 OR12D2P58182 307 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 CSNK2A1P68400 391 aaPredicted RBP6.15□□□□□ -1.43
BRCA1-216ENST00000484087 SIRPAP78324 504 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 SLC35A1P78382 337 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 FABP5Q01469 135 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 POU3F1Q03052 451 aaPredicted RBP6.15□□□□□ -1.43
BRCA1-216ENST00000484087 GLO1Q04760 184 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 MXD1Q05195 221 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 EGR3Q06889 387 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 TFF3Q07654 80 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 SLC3A1Q07837 685 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 MYBPHQ13203 477 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 DOC2BQ14184 412 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 GLYR1Q49A26 553 aaPredicted RBP6.15□□□□□ -1.43
BRCA1-216ENST00000484087 TP53I3Q53FA7 332 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 LINC01590Q5TEZ4 76 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 VASNQ6EMK4 673 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 TMEM225Q6GV28 225 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 MZT2AQ6P582 158 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 SLC35D2Q76EJ3 337 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 BTLAQ7Z6A9 289 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 UEVLDQ8IX04 471 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 OR6V1Q8N148 313 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 GTPBP8Q8N3Z3 284 aaPredicted RBP6.15□□□□□ -1.43
BRCA1-216ENST00000484087 ADPRHL1Q8NDY3 354 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 OR6N2Q8NGY6 317 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 ZNF519Q8TB69 540 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 FNDC8Q8TC99 324 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 ZPLD1Q8TCW7 415 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 ASB17Q8WXJ9 295 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 RND1Q92730 232 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 ABTB1Q969K4 478 aaPredicted RBP6.15□□□□□ -1.43
BRCA1-216ENST00000484087 SLC25A46Q96AG3 418 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 SMIM19Q96E16 107 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 ZNF845Q96IR2 970 aaPredicted RBP6.15□□□□□ -1.43
BRCA1-216ENST00000484087 ARL5BQ96KC2 179 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 RBP7Q96R05 134 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 OR5B2Q96R09 309 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 KCNS3Q9BQ31 491 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 PIGQQ9BRB3 760 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 NAA11Q9BSU3 229 aaPredicted RBP6.15□□□□□ -1.43
BRCA1-216ENST00000484087 CDADC1Q9BWV3 514 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 HDHD5Q9BXW7 423 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 OR2B2Q9GZK3 357 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 PRDM14Q9GZV8 571 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 TPK1Q9H3S4 243 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 WDR76Q9H967 626 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 FANCFQ9NPI8 374 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 VSX1Q9NZR4 365 aaPredicted RBP6.15□□□□□ -1.43
BRCA1-216ENST00000484087 ADAM30Q9UKF2 790 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 B9D1Q9UPM9 204 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 TRAPPC4Q9Y296 219 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 PMF1-BGLAPU3KQ54 211 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 NOTCH2Q04721 2471 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 VPS13CQ709C8 3753 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 CELSR1Q9NYQ6 3014 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 TRBV2A0A0J9YWF9 115 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 IQCMA0A1B0GVH7 501 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 OR2M5A3KFT3 312 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 CD8B2A6NJW9 211 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-216ENST00000484087 LOC110117498-PIK3R3F6TDL0 507 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 MS4A18H0YCH9 400 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 H7C1C5 153 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 J3QRK9 145 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 SULT2B1O00204 365 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 OGG1O15527 345 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 SLC16A7O60669 478 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 EIF1BO60739 113 aaKnown RBP6.14□□□□□ -1.43
BRCA1-216ENST00000484087 TMCC2O75069 709 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 WDR1O75083 606 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 KHDRBS3O75525 346 aaKnown RBP6.14□□□□□ -1.43
BRCA1-216ENST00000484087 SULT1C4O75897 302 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 ARL6IP5O75915 188 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 AKR7A3O95154 331 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 TGM6O95932 706 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 CD8BP10966 210 aa6.14□□□□□ -1.43
BRCA1-216ENST00000484087 IMPDH2P12268 514 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms