RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 SYNPO2LQ9H987 977 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 HINT3Q9NQE9 182 aaKnown RBP7.08□□□□□ -1.28
COL4A5-205ENST00000483338 GULP1Q9UBP9 304 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 SERGEFQ9UGK8 458 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 STEAP1Q9UHE8 339 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 SRPK3Q9UPE1 567 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 SLC38A8A6NNN8 435 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 H0YIZ8 118 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 GLSO94925 669 aaPredicted RBP7.08□□□□□ -1.28
COL4A5-205ENST00000483338 HLA-AP01891 365 aaKnown RBP7.08□□□□□ -1.28
COL4A5-205ENST00000483338 CSF1P09603 554 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 AKAIN1P0CW23 69 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 FGF5P12034 268 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 HOXB2P14652 356 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 DTYMKP23919 212 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 OR12D2P58182 307 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 COL5A1-AS1Q5SY13 56 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 LYPLAL1Q5VWZ2 237 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 ZNF836Q6ZNA1 936 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 ADCK2Q7Z695 626 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 CMTM1Q8IZ96 169 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 OR10H4Q8NGA5 316 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 SMIM14Q96QK8 99 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 NELFAQ9H3P2 528 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 KCNJ16Q9NPI9 418 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 OR52A1Q9UKL2 312 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 RNF150Q9ULK6 438 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 J3QLW9 94 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 GRM6O15303 877 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 STK16O75716 305 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 NDUFB8O95169 186 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 NTN1O95631 604 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 TSPAN15O95858 294 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 LGALS2P05162 132 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 DCNP07585 359 aaKnown RBP7.08□□□□□ -1.28
COL4A5-205ENST00000483338 MELTFP08582 738 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 ZNF19P17023 458 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 IQCJQ1A5X6 159 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 MIDNQ504T8 468 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 RAB41Q5JT25 222 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 MORN1Q5T089 497 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 MARC1Q5VT66 337 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 RPL7L1Q6DKI1 246 aaKnown RBP7.08□□□□□ -1.28
COL4A5-205ENST00000483338 FBXO42Q6P3S6 717 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 MTSS1LQ765P7 747 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 GRASPQ7Z6J2 395 aaPredicted RBP7.08□□□□□ -1.28
COL4A5-205ENST00000483338 UBTD2Q8WUN7 234 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 CDS1Q92903 461 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 NEIL2Q969S2 332 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 SGCZQ96LD1 299 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 SLC25A18Q9H1K4 315 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 SLC35B3Q9H1N7 401 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 AURKAIP1Q9NWT8 199 aaPredicted RBP7.08□□□□□ -1.28
COL4A5-205ENST00000483338 CNIH4Q9P003 139 aa7.08□□□□□ -1.28
COL4A5-205ENST00000483338 TVP23AA6NH52 213 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 ELOA3DA6NLF2 546 aaPredicted RBP7.07□□□□□ -1.28
COL4A5-205ENST00000483338 GPR182O15218 404 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 PRAMEF4O60810 478 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 GPR37L1O60883 481 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 ARL6IP5O75915 188 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 HPRT1P00492 218 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 UMODP07911 640 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 RAB40ALP0C0E4 278 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 TDGF1P13385 188 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 GZMHP20718 246 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 CTGFP29279 349 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 UBE2KP61086 200 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 RPS11P62280 158 aaKnown RBP eCLIP7.07□□□□□ -1.28
COL4A5-205ENST00000483338 NKAIN1Q4KMZ8 207 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 PRAMEF9Q5VWM5 478 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 TMEM268Q5VZI3 342 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 REEP3Q6NUK4 255 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 ZNF433Q8N7K0 673 aaPredicted RBP7.07□□□□□ -1.28
COL4A5-205ENST00000483338 MFSD9Q8NBP5 474 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 BHLHE23Q8NDY6 225 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 RAB40AQ8WXH6 277 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 AUTS2Q8WXX7 1259 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 TSLPQ969D9 159 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 MRGPRX1Q96LB2 322 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 PCBD2Q9H0N5 130 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 MED20Q9H944 212 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 TAF9BQ9HBM6 251 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 NRIP3Q9NQ35 241 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 DYRK1BQ9Y463 629 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 SCN8AQ9UQD0 1980 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 ARID1AO14497 2285 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 RNASET2O00584 256 aaKnown RBP7.07□□□□□ -1.28
COL4A5-205ENST00000483338 FGF1P05230 155 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 CTXN2P0C2S0 81 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 LMO1P25800 156 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 PYCR1P32322 319 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 NAA10P41227 235 aaPredicted RBP7.07□□□□□ -1.28
COL4A5-205ENST00000483338 POLR2HP52434 150 aaKnown RBP7.07□□□□□ -1.28
COL4A5-205ENST00000483338 SMIM11AP58511 58 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 SNRPNP63162 240 aaKnown RBP7.07□□□□□ -1.28
COL4A5-205ENST00000483338 DUSP28Q4G0W2 176 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 CXCL17Q6UXB2 119 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 UNQ9370/PRO34162Q6UXP9 181 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 PAQR9Q6ZVX9 377 aa7.07□□□□□ -1.28
COL4A5-205ENST00000483338 RAB39BQ96DA2 213 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms