RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 SLC5A7Q9GZV3 580 aa17.31■□□□□ 0.36
CCM2-214ENST00000481194 SLCO1B1Q9Y6L6 691 aa17.31■□□□□ 0.36
CCM2-214ENST00000481194 BGLAPP02818 100 aa17.3■□□□□ 0.36
CCM2-214ENST00000481194 AMY2AP04746 511 aa17.3■□□□□ 0.36
CCM2-214ENST00000481194 SP1P08047 785 aa17.3■□□□□ 0.36
CCM2-214ENST00000481194 INSM1Q01101 510 aaPredicted RBP17.3■□□□□ 0.36
CCM2-214ENST00000481194 ARPC4-TTLL3A0A0A6YYG9 625 aa17.3■□□□□ 0.36
CCM2-214ENST00000481194 PRAF2O60831 178 aa17.3■□□□□ 0.36
CCM2-214ENST00000481194 SERPINA2P20848 420 aa17.3■□□□□ 0.36
CCM2-214ENST00000481194 PSMA6P60900 246 aaKnown RBP17.3■□□□□ 0.36
CCM2-214ENST00000481194 RBM39Q14498 530 aaKnown RBP17.3■□□□□ 0.36
CCM2-214ENST00000481194 C11orf40Q8WZ69 217 aa17.3■□□□□ 0.36
CCM2-214ENST00000481194 TSSK2Q96PF2 358 aa17.3■□□□□ 0.36
CCM2-214ENST00000481194 SYNPO2LQ9H987 977 aa17.3■□□□□ 0.36
CCM2-214ENST00000481194 ZNF736B4DX44 427 aaPredicted RBP17.3■□□□□ 0.36
CCM2-214ENST00000481194 TAS2R19P59542 299 aa17.3■□□□□ 0.36
CCM2-214ENST00000481194 FUT5Q11128 374 aa17.3■□□□□ 0.36
CCM2-214ENST00000481194 PCOLCEQ15113 449 aa17.3■□□□□ 0.36
CCM2-214ENST00000481194 NKPD1Q17RQ9 610 aa17.3■□□□□ 0.36
CCM2-214ENST00000481194 LIPHQ8WWY8 451 aa17.3■□□□□ 0.36
CCM2-214ENST00000481194 RTL8AQ9BWD3 113 aa17.3■□□□□ 0.36
CCM2-214ENST00000481194 IGKV3D-11A0A0A0MRZ8 115 aa17.3■□□□□ 0.36
CCM2-214ENST00000481194 AQP7P3A6NL99 342 aa17.3■□□□□ 0.36
CCM2-214ENST00000481194 IGHV3-9P01782 118 aa17.3■□□□□ 0.36
CCM2-214ENST00000481194 THAP6Q8TBB0 222 aa17.3■□□□□ 0.36
CCM2-214ENST00000481194 FAM198BQ6UWH4 519 aa17.29■□□□□ 0.36
CCM2-214ENST00000481194 OR51A2Q8NGJ7 313 aa17.29■□□□□ 0.36
CCM2-214ENST00000481194 RAB39BQ96DA2 213 aa17.29■□□□□ 0.36
CCM2-214ENST00000481194 ABHD6Q9BV23 337 aa17.29■□□□□ 0.36
CCM2-214ENST00000481194 CEACAM16Q2WEN9 425 aa17.29■□□□□ 0.36
CCM2-214ENST00000481194 FAM83FQ8NEG4 500 aaPredicted RBP17.29■□□□□ 0.36
CCM2-214ENST00000481194 PBOV1Q9GZY1 135 aa17.29■□□□□ 0.36
CCM2-214ENST00000481194 BHLHE40O14503 412 aa17.29■□□□□ 0.36
CCM2-214ENST00000481194 RAB3DO95716 219 aa17.29■□□□□ 0.36
CCM2-214ENST00000481194 CPT2P23786 658 aa17.29■□□□□ 0.36
CCM2-214ENST00000481194 ZNF133P52736 654 aaPredicted RBP17.29■□□□□ 0.36
CCM2-214ENST00000481194 TAS2R46P59540 309 aa17.29■□□□□ 0.36
CCM2-214ENST00000481194 PARP16Q8N5Y8 322 aa17.29■□□□□ 0.36
CCM2-214ENST00000481194 INO80EQ8NBZ0 244 aaPredicted RBP17.29■□□□□ 0.36
CCM2-214ENST00000481194 TRAV6A0A075B6T7 132 aa17.29■□□□□ 0.36
CCM2-214ENST00000481194 CDC42EP2O14613 210 aa17.29■□□□□ 0.36
CCM2-214ENST00000481194 DVL2O14641 736 aa17.29■□□□□ 0.36
CCM2-214ENST00000481194 FADS1O60427 444 aa17.29■□□□□ 0.36
CCM2-214ENST00000481194 IGKV3-11P04433 115 aa17.29■□□□□ 0.36
CCM2-214ENST00000481194 RAC2P15153 192 aa17.29■□□□□ 0.36
CCM2-214ENST00000481194 OR1M1Q8NGA1 313 aa17.29■□□□□ 0.36
CCM2-214ENST00000481194 COQ8AQ8NI60 647 aa17.29■□□□□ 0.36
CCM2-214ENST00000481194 LGALS14Q8TCE9 139 aa17.29■□□□□ 0.36
CCM2-214ENST00000481194 GABRR1P24046 479 aa17.28■□□□□ 0.36
CCM2-214ENST00000481194 PTGS2P35354 604 aa17.28■□□□□ 0.36
CCM2-214ENST00000481194 RAD52P43351 418 aa17.28■□□□□ 0.36
CCM2-214ENST00000481194 IL17RDQ8NFM7 739 aa17.28■□□□□ 0.36
CCM2-214ENST00000481194 TSPAN10Q9H1Z9 355 aaPredicted RBP17.28■□□□□ 0.36
CCM2-214ENST00000481194 ZCCHC4Q9H5U6 513 aa17.28■□□□□ 0.36
CCM2-214ENST00000481194 KCNS2Q9ULS6 477 aa17.28■□□□□ 0.36
CCM2-214ENST00000481194 LOC100509620A0A075B734 347 aa17.28■□□□□ 0.36
CCM2-214ENST00000481194 FUOMA2VDF0 154 aa17.28■□□□□ 0.36
CCM2-214ENST00000481194 MOGAT1Q96PD6 335 aa17.28■□□□□ 0.36
CCM2-214ENST00000481194 RCE1Q9Y256 329 aa17.28■□□□□ 0.36
CCM2-214ENST00000481194 AQP8O94778 261 aa17.28■□□□□ 0.36
CCM2-214ENST00000481194 LHFPL2Q6ZUX7 228 aa17.28■□□□□ 0.36
CCM2-214ENST00000481194 KISS1RQ969F8 398 aaPredicted RBP17.28■□□□□ 0.36
CCM2-214ENST00000481194 SLC6A7Q99884 636 aa17.28■□□□□ 0.36
CCM2-214ENST00000481194 PDCD1LG2Q9BQ51 273 aa17.28■□□□□ 0.36
CCM2-214ENST00000481194 SLCO1C1Q9NYB5 712 aa17.28■□□□□ 0.36
CCM2-214ENST00000481194 SLC5A6Q9Y289 635 aa17.28■□□□□ 0.36
CCM2-214ENST00000481194 MYO10Q9HD67 2058 aa17.28■□□□□ 0.36
CCM2-214ENST00000481194 IGLV3-12A0A075B6K2 115 aa17.28■□□□□ 0.36
CCM2-214ENST00000481194 H7C1Q1 480 aa17.28■□□□□ 0.36
CCM2-214ENST00000481194 NCR1O76036 304 aa17.28■□□□□ 0.36
CCM2-214ENST00000481194 PTGER4P35408 488 aa17.28■□□□□ 0.36
CCM2-214ENST00000481194 ZP4Q12836 540 aa17.28■□□□□ 0.36
CCM2-214ENST00000481194 CCBE1Q6UXH8 406 aaPredicted RBP17.28■□□□□ 0.36
CCM2-214ENST00000481194 BOD1Q96IK1 185 aa17.28■□□□□ 0.36
CCM2-214ENST00000481194 CREBL2O60519 120 aaPredicted RBP17.28■□□□□ 0.36
CCM2-214ENST00000481194 FAM3DQ96BQ1 224 aa17.28■□□□□ 0.36
CCM2-214ENST00000481194 VRK1Q99986 396 aaPredicted RBP17.28■□□□□ 0.36
CCM2-214ENST00000481194 CHIAQ9BZP6 476 aa17.28■□□□□ 0.36
CCM2-214ENST00000481194 PIKFYVEQ9Y2I7 2098 aa17.27■□□□□ 0.36
CCM2-214ENST00000481194 CTSBP07858 339 aa17.27■□□□□ 0.36
CCM2-214ENST00000481194 CHRM2P08172 466 aa17.27■□□□□ 0.36
CCM2-214ENST00000481194 HCCSP53701 268 aa17.27■□□□□ 0.36
CCM2-214ENST00000481194 ZNF169Q14929 603 aaPredicted RBP17.27■□□□□ 0.36
CCM2-214ENST00000481194 PLPPR5Q32ZL2 321 aa17.27■□□□□ 0.36
CCM2-214ENST00000481194 AADACL4Q5VUY2 407 aa17.27■□□□□ 0.36
CCM2-214ENST00000481194 YES1P07947 543 aa17.27■□□□□ 0.36
CCM2-214ENST00000481194 CARTPTQ16568 116 aa17.27■□□□□ 0.36
CCM2-214ENST00000481194 DTX3Q8N9I9 347 aa17.27■□□□□ 0.36
CCM2-214ENST00000481194 PAQR8Q8TEZ7 354 aa17.27■□□□□ 0.36
CCM2-214ENST00000481194 SIGLEC11Q96RL6 698 aa17.27■□□□□ 0.36
CCM2-214ENST00000481194 TICRRQ7Z2Z1 1910 aa17.27■□□□□ 0.36
CCM2-214ENST00000481194 NTN3O00634 580 aaPredicted RBP17.27■□□□□ 0.35
CCM2-214ENST00000481194 CDC20Q12834 499 aa17.27■□□□□ 0.35
CCM2-214ENST00000481194 ZNF574Q6ZN55 896 aaPredicted RBP17.27■□□□□ 0.35
CCM2-214ENST00000481194 CPEB3Q8NE35 698 aaKnown RBP17.27■□□□□ 0.35
CCM2-214ENST00000481194 OR8D4Q8NGM9 314 aa17.27■□□□□ 0.35
CCM2-214ENST00000481194 OR2G2Q8NGZ5 317 aa17.27■□□□□ 0.35
CCM2-214ENST00000481194 SLC6A15Q9H2J7 730 aa17.27■□□□□ 0.35
CCM2-214ENST00000481194 ZFC3H1O60293 1989 aaKnown RBP17.27■□□□□ 0.35
CCM2-214ENST00000481194 PRR19A6NJB7 356 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms