RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 HTR5AP47898 357 aa9.78□□□□□ -0.84
CCM2-213ENST00000480658 LIMS1P48059 325 aa9.78□□□□□ -0.84
CCM2-213ENST00000480658 GK3PQ14409 553 aa9.78□□□□□ -0.84
CCM2-213ENST00000480658 MESTQ5EB52 335 aa9.78□□□□□ -0.84
CCM2-213ENST00000480658 SLC27A4Q6P1M0 643 aa9.78□□□□□ -0.84
CCM2-213ENST00000480658 IGFN1Q86VF2 1251 aa9.78□□□□□ -0.84
CCM2-213ENST00000480658 LRP11Q86VZ4 500 aa9.78□□□□□ -0.84
CCM2-213ENST00000480658 JAZF1Q86VZ6 243 aa9.78□□□□□ -0.84
CCM2-213ENST00000480658 PAQR4Q8N4S7 273 aaPredicted RBP9.78□□□□□ -0.84
CCM2-213ENST00000480658 GJC3Q8NFK1 279 aa9.78□□□□□ -0.84
CCM2-213ENST00000480658 MARS2Q96GW9 593 aaKnown RBP9.78□□□□□ -0.84
CCM2-213ENST00000480658 RACGAP1Q9H0H5 632 aa9.78□□□□□ -0.84
CCM2-213ENST00000480658 HDHD2Q9H0R4 259 aa9.78□□□□□ -0.84
CCM2-213ENST00000480658 PLEK2Q9NYT0 353 aa9.78□□□□□ -0.84
CCM2-213ENST00000480658 MYEF2Q9P2K5 600 aaKnown RBP9.78□□□□□ -0.84
CCM2-213ENST00000480658 EGFL7Q9UHF1 273 aa9.78□□□□□ -0.84
CCM2-213ENST00000480658 POLR1DQ9Y2S0 133 aa9.78□□□□□ -0.84
CCM2-213ENST00000480658 JMJD1CQ15652 2540 aa9.78□□□□□ -0.84
CCM2-213ENST00000480658 A0A0G2JMP0 313 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 A0A0X1KG70 313 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 UNC119BA6NIH7 251 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 J3QLI3 93 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 ARPC3O15145 178 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 TCF21O43680 179 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 TIMM8AO60220 97 aaPredicted RBP9.77□□□□□ -0.85
CCM2-213ENST00000480658 RP2O75695 350 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 RENP00797 406 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 CD55P08174 381 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 GAAP10253 952 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 NCK1P16333 377 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 TCN1P20061 433 aaPredicted RBP9.77□□□□□ -0.85
CCM2-213ENST00000480658 MMP15P51511 669 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 SEC24CP53992 1094 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 CCL8P80075 99 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 MXRA7P84157 204 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 SPIBQ01892 262 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 ECH1Q13011 328 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 FHL1Q13642 323 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 MSMPQ1L6U9 139 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 SLC36A3Q495N2 470 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 ACSM5Q6NUN0 579 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 USP51Q70EK9 711 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 ZNF101Q8IZC7 436 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 OR4M2Q8NGB6 313 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 OR52L1Q8NGH7 329 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 AKR7LQ8NHP1 331 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 TMEM186Q96B77 213 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 RASD2Q96D21 266 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 C7orf34Q96L11 122 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 MDFIQ99750 246 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 OR2J1Q9GZK6 312 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 WNT5BQ9H1J7 359 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 SYT4Q9H2B2 425 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 OR51B6Q9H340 312 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 IL1RAPQ9NPH3 570 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 KCNG2Q9UJ96 466 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 ADAM18Q9Y3Q7 739 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 ABCA1O95477 2261 aa9.77□□□□□ -0.85
CCM2-213ENST00000480658 LOC100509620A0A075B734 347 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 IGKV1D-43A0A0B4J1Z2 117 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 OR10H3O60404 316 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 SLC16A7O60669 478 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 PTP4A3O75365 173 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 CLPTM1O96005 669 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 PNPP00491 289 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 SELEP16581 610 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 RRM2P31350 389 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 WNT5AP41221 380 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 MAGEB1P43366 347 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 CCNIQ14094 377 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 ENDOGQ14249 297 aaKnown RBP9.76□□□□□ -0.85
CCM2-213ENST00000480658 TRIP10Q15642 601 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 KCNMB1Q16558 191 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 RFX4Q33E94 735 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 ZNF774Q6NX45 483 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 TBPL2Q6SJ96 375 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 VASH1Q7L8A9 365 aaPredicted RBP9.76□□□□□ -0.85
CCM2-213ENST00000480658 SPICQ8N5J4 248 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 OR4C15Q8NGM1 316 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 CLDND2Q8NHS1 167 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 SLC25A40Q8TBP6 338 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 ST7LQ8TDW4 575 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 ZFAND2BQ8WV99 257 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 APOBEC3DQ96AK3 386 aaPredicted RBP9.76□□□□□ -0.85
CCM2-213ENST00000480658 Q96M85 177 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 COQ7Q99807 217 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 ZNF665Q9H7R5 613 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 HIF1ANQ9NWT6 349 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 ASH2LQ9UBL3 628 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 METRNQ9UJH8 293 aa9.76□□□□□ -0.85
CCM2-213ENST00000480658 NOP16Q9Y3C1 178 aaKnown RBP9.76□□□□□ -0.85
CCM2-213ENST00000480658 TRBV4-1A0A0J9YWV2 114 aa9.75□□□□□ -0.85
CCM2-213ENST00000480658 ARPC2O15144 300 aa9.75□□□□□ -0.85
CCM2-213ENST00000480658 NCR1O76036 304 aa9.75□□□□□ -0.85
CCM2-213ENST00000480658 IGHV1-46P01743 117 aa9.75□□□□□ -0.85
CCM2-213ENST00000480658 RAC2P15153 192 aa9.75□□□□□ -0.85
CCM2-213ENST00000480658 CTLA4P16410 223 aa9.75□□□□□ -0.85
CCM2-213ENST00000480658 KITLGP21583 273 aa9.75□□□□□ -0.85
CCM2-213ENST00000480658 COL8A2P25067 703 aa9.75□□□□□ -0.85
CCM2-213ENST00000480658 CENPAP49450 140 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms