RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 BIDP55957 195 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 HIST1H3AP68431 136 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 ADAM8P78325 824 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 SLC25A3Q00325 362 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 SRSF2Q01130 221 aaKnown RBP4.23□□□□□ -1.73
PTCD3-213ENST00000480102 CAMK2DQ13557 499 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 ODF1Q14990 250 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 PCK2Q16822 640 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 HIST2H3PS2Q5TEC6 136 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 PODNL1Q6PEZ8 512 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 DNM1P34Q6PK57 102 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 SMARCD3Q6STE5 483 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 UGT2A3Q6UWM9 527 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 RASSF6Q6ZTQ3 369 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 HIST2H3AQ71DI3 136 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 ZER1Q7Z7L7 766 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 EGFL6Q8IUX8 553 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 LURAP1LQ8IV03 231 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 C10orf67Q8IYJ2 551 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 FBXL14Q8N1E6 418 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 C10orf53Q8N6V4 93 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 ZNF540Q8NDQ6 660 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 OR10H5Q8NGA6 315 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 OR4C15Q8NGM1 316 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 OR6N1Q8NGY5 312 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 MCHR2Q969V1 340 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 NABP1Q96AH0 204 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 SLC7A6OSQ96CW6 309 aaPredicted RBP4.23□□□□□ -1.73
PTCD3-213ENST00000480102 LRGUKQ96M69 825 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 DCLRE1CQ96SD1 692 aaKnown RBP4.23□□□□□ -1.73
PTCD3-213ENST00000480102 BCL2L14Q9BZR8 327 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 FAM107BQ9H098 131 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 LRMDAQ9H2I8 198 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 MED29Q9NX70 200 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 GRHPRQ9UBQ7 328 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 SLC7A8Q9UHI5 535 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 ENOPH1Q9UHY7 261 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 NDRG4Q9ULP0 352 aaKnown RBP4.23□□□□□ -1.73
PTCD3-213ENST00000480102 TMCC3Q9ULS5 477 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 POFUT2Q9Y2G5 429 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 UGT2A1Q9Y4X1 527 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 TIMM10BQ9Y5J6 103 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 LYVE1Q9Y5Y7 322 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 FKBP7Q9Y680 259 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 NINQ8N4C6 2090 aa4.23□□□□□ -1.73
PTCD3-213ENST00000480102 EML6Q6ZMW3 1958 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 A0A1B0GWJ7 208 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 MCIDASD6RGH6 385 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 E7EQL1 145 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 LRRN3E7EW58 273 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 M0R3G1 203 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 BHLHE40O14503 412 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 CDC42EP2O14613 210 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 RAB36O95755 333 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 CD8AP01732 235 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 IGHV3-9P01782 118 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 SOD3P08294 240 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 QDPRP09417 244 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 CECR9P0C854 216 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 ANXA8P13928 327 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 ZNF250P15622 560 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 SLC25A16P16260 332 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 TNFRSF1BP20333 461 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 GIFP27352 417 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 RRM2P31350 389 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 SERPINF1P36955 418 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 AQP2P41181 271 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 RAD52P43351 418 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 PTH2RP49190 550 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 RGS6P49758 472 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 EFNA4P52798 201 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 RIPPLY3P57055 190 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 CLRN1P58418 232 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 FXYD6P3P58550 94 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 CTXN1P60606 82 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 RAB1AP62820 205 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 GLO1Q04760 184 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 SCRN3Q0VDG4 424 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 ECH1Q13011 328 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 SNTB1Q13884 538 aaKnown RBP4.22□□□□□ -1.73
PTCD3-213ENST00000480102 MICAQ29983 383 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 MST1LQ2TV78 715 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 PCGF3Q3KNV8 242 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 KRTAP27-1Q3LI81 207 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 HIKESHIQ53FT3 197 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 CT83Q5H943 113 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 TOR2AQ5JU69 321 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 TEX30Q5JUR7 227 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 MBNL2Q5VZF2 373 aaKnown RBP4.22□□□□□ -1.73
PTCD3-213ENST00000480102 OR2T5Q6IEZ7 315 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 TMEM53Q6P2H8 277 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 ARL9Q6T311 187 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 SLC22A25Q6T423 547 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 ZNF813Q6ZN06 617 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 ZNF620Q6ZNG0 422 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 Q6ZSN1 163 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 ZDHHC21Q8IVQ6 265 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 GLB1L2Q8IW92 636 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 KDM8Q8N371 416 aa4.22□□□□□ -1.73
PTCD3-213ENST00000480102 PARP8Q8N3A8 854 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms