RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 CALCBP10092 127 aa13.02□□□□□ -0.33
COL20A1-206ENST00000479501 ANXA7P20073 488 aaKnown RBP13.02□□□□□ -0.33
COL20A1-206ENST00000479501 GABRR1P24046 479 aa13.02□□□□□ -0.33
COL20A1-206ENST00000479501 GPR3P46089 330 aa13.02□□□□□ -0.33
COL20A1-206ENST00000479501 RAB4BP61018 213 aa13.02□□□□□ -0.33
COL20A1-206ENST00000479501 FLI1Q01543 452 aaPredicted RBP13.02□□□□□ -0.33
COL20A1-206ENST00000479501 TSPAN10Q9H1Z9 355 aaPredicted RBP13.02□□□□□ -0.33
COL20A1-206ENST00000479501 DNAJB12Q9NXW2 375 aaKnown RBP13.02□□□□□ -0.33
COL20A1-206ENST00000479501 PCOLCE2Q9UKZ9 415 aa13.02□□□□□ -0.33
COL20A1-206ENST00000479501 AHCTF1Q8WYP5 2266 aa13.02□□□□□ -0.33
COL20A1-206ENST00000479501 OTOFQ9HC10 1997 aa13.02□□□□□ -0.33
COL20A1-206ENST00000479501 A0A0A6YYJ9 748 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 TRIM64A6NGJ6 449 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 TRIM64BA6NI03 449 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 PRSS44E7EML9 344 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 AIPO00170 330 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 SPINT1O43278 529 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 CBX7O95931 251 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 CBR1P16152 277 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 ZNF136P52737 540 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 PCBD1P61457 104 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 AKR1C1Q04828 323 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 MFAP5Q13361 173 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 THSD4Q6ZMP0 1018 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 TRAPPC6BQ86SZ2 158 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 CADM4Q8NFZ8 388 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 OR52I2Q8NH67 350 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 WWTR1Q9GZV5 400 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 FAM86C1Q9NVL1 165 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 CGGBP1Q9UFW8 167 aaPredicted RBP13.01□□□□□ -0.33
COL20A1-206ENST00000479501 PRSS37A4D1T9 235 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 IFITM5A6NNB3 132 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 GIPP09681 153 aaPredicted RBP13.01□□□□□ -0.33
COL20A1-206ENST00000479501 EXT1Q16394 746 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 PRTGQ2VWP7 1150 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 ADAM5Q6NVV9 412 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 TMEM71Q6P5X7 295 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 CCDC71Q8IV32 467 aaPredicted RBP13.01□□□□□ -0.33
COL20A1-206ENST00000479501 NKAIN3Q8N8D7 197 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 KCNG3Q8TAE7 436 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 TXNIPQ9H3M7 391 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 A0A0G2JMZ2 1700 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 WDR90Q96KV7 1748 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 A0A0B4J203 849 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 CNOT4O95628 575 aaKnown RBP13.01□□□□□ -0.33
COL20A1-206ENST00000479501 EIF4EP06730 217 aaKnown RBP13.01□□□□□ -0.33
COL20A1-206ENST00000479501 TCN2P20062 427 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 KIR2DL3P43628 341 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 UBE2KP61086 200 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 PLA2G7Q13093 441 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 PDZK1IP1Q13113 114 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 IL10RAQ13651 578 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 CNN3Q15417 329 aaKnown RBP13.01□□□□□ -0.33
COL20A1-206ENST00000479501 BCL2A1Q16548 175 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 SSX9Q7RTT3 188 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 SLC16A14Q7RTX9 510 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 CPEB2Q7Z5Q1 589 aaKnown RBP13.01□□□□□ -0.33
COL20A1-206ENST00000479501 LIX1LQ8IVB5 337 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 ST8SIA2Q92186 375 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 DVL3Q92997 716 aaPredicted RBP13.01□□□□□ -0.33
COL20A1-206ENST00000479501 SLC25A21Q9BQT8 299 aaPredicted RBP13.01□□□□□ -0.33
COL20A1-206ENST00000479501 NKX6-2Q9C056 277 aaPredicted RBP13.01□□□□□ -0.33
COL20A1-206ENST00000479501 A6NCN8 305 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 D6RAR5 112 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 MRPL33O75394 65 aaKnown RBP13.01□□□□□ -0.33
COL20A1-206ENST00000479501 ADRB1P08588 477 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 SLC2A1P11166 492 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 ZNF93P35789 620 aaPredicted RBP13.01□□□□□ -0.33
COL20A1-206ENST00000479501 CX3CR1P49238 355 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 CLDN20P56880 219 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 ZNF74Q16587 644 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 SOHLH1Q5JUK2 328 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 Q6ZTK2 550 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 ZNF681Q96N22 645 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 ATF6BQ99941 703 aa13.01□□□□□ -0.33
COL20A1-206ENST00000479501 ING1Q9UK53 422 aaPredicted RBP13.01□□□□□ -0.33
COL20A1-206ENST00000479501 MRPS28Q9Y2Q9 187 aaKnown RBP13.01□□□□□ -0.33
COL20A1-206ENST00000479501 TNFSF12-TNFSF13A0A0A6YY99 330 aa13□□□□□ -0.33
COL20A1-206ENST00000479501 IGHV1OR15-9A0A0B4J2B8 117 aa13□□□□□ -0.33
COL20A1-206ENST00000479501 ARPC3O15145 178 aa13□□□□□ -0.33
COL20A1-206ENST00000479501 TNFSF12O43508 249 aa13□□□□□ -0.33
COL20A1-206ENST00000479501 PAN3Q58A45 887 aaKnown RBP13□□□□□ -0.33
COL20A1-206ENST00000479501 OR5D18Q8NGL1 313 aa13□□□□□ -0.33
COL20A1-206ENST00000479501 OR5M1Q8NGP8 315 aa13□□□□□ -0.33
COL20A1-206ENST00000479501 NANOS1Q8WY41 292 aaKnown RBP13□□□□□ -0.33
COL20A1-206ENST00000479501 SLCO5A1Q9H2Y9 848 aa13□□□□□ -0.33
COL20A1-206ENST00000479501 CDCP1Q9H5V8 836 aa13□□□□□ -0.33
COL20A1-206ENST00000479501 KCNG2Q9UJ96 466 aa13□□□□□ -0.33
COL20A1-206ENST00000479501 PCYT1BQ9Y5K3 369 aaPredicted RBP13□□□□□ -0.33
COL20A1-206ENST00000479501 PMS2P2O95744 297 aa13□□□□□ -0.33
COL20A1-206ENST00000479501 HTR5AP47898 357 aa13□□□□□ -0.33
COL20A1-206ENST00000479501 RNF4P78317 190 aa13□□□□□ -0.33
COL20A1-206ENST00000479501 EBPQ15125 230 aaKnown RBP13□□□□□ -0.33
COL20A1-206ENST00000479501 CMTM1Q8IZ96 169 aa13□□□□□ -0.33
COL20A1-206ENST00000479501 TCTE3Q8IZS6 198 aa13□□□□□ -0.33
COL20A1-206ENST00000479501 CRIPAKQ8N1N5 446 aa13□□□□□ -0.33
COL20A1-206ENST00000479501 OR56B1Q8NGI3 324 aa13□□□□□ -0.33
COL20A1-206ENST00000479501 ORAI1Q96D31 301 aa13□□□□□ -0.33
COL20A1-206ENST00000479501 RAB3CQ96E17 227 aa13□□□□□ -0.33
COL20A1-206ENST00000479501 PIGQQ9BRB3 760 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms