RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 ULBP3Q9BZM4 244 aa19.18■□□□□ 0.66
SDF4-206ENST00000478938 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.18■□□□□ 0.66
SDF4-206ENST00000478938 THBS1P07996 1170 aa19.18■□□□□ 0.66
SDF4-206ENST00000478938 CD52P31358 61 aa19.18■□□□□ 0.66
SDF4-206ENST00000478938 LSSP48449 732 aa19.18■□□□□ 0.66
SDF4-206ENST00000478938 DHPSP49366 369 aaPredicted RBP19.18■□□□□ 0.66
SDF4-206ENST00000478938 ADAM8P78325 824 aa19.18■□□□□ 0.66
SDF4-206ENST00000478938 PRAMEF14Q5SWL7 426 aa19.18■□□□□ 0.66
SDF4-206ENST00000478938 HIST2H3PS2Q5TEC6 136 aa19.18■□□□□ 0.66
SDF4-206ENST00000478938 LANCL3Q6ZV70 420 aa19.18■□□□□ 0.66
SDF4-206ENST00000478938 HSD11B1LQ7Z5J1 315 aa19.18■□□□□ 0.66
SDF4-206ENST00000478938 UBE3DQ7Z6J8 389 aa19.18■□□□□ 0.66
SDF4-206ENST00000478938 OR9A1PQ8NGU1 263 aa19.18■□□□□ 0.66
SDF4-206ENST00000478938 Q8WTZ3 238 aa19.18■□□□□ 0.66
SDF4-206ENST00000478938 CCDC74AQ96AQ1 378 aa19.18■□□□□ 0.66
SDF4-206ENST00000478938 FAM3DQ96BQ1 224 aa19.18■□□□□ 0.66
SDF4-206ENST00000478938 PRR13Q9NZ81 148 aa19.18■□□□□ 0.66
SDF4-206ENST00000478938 OR14J1Q9UGF5 321 aa19.18■□□□□ 0.66
SDF4-206ENST00000478938 GOLT1BQ9Y3E0 138 aa19.18■□□□□ 0.66
SDF4-206ENST00000478938 TOX3O15405 576 aaPredicted RBP19.17■□□□□ 0.66
SDF4-206ENST00000478938 RAMP1O60894 148 aa19.17■□□□□ 0.66
SDF4-206ENST00000478938 PTBP3O95758 552 aaKnown RBP19.17■□□□□ 0.66
SDF4-206ENST00000478938 UBE2V2Q15819 145 aa19.17■□□□□ 0.66
SDF4-206ENST00000478938 LDLRAD1Q5T700 205 aa19.17■□□□□ 0.66
SDF4-206ENST00000478938 TMEM106AQ96A25 262 aa19.17■□□□□ 0.66
SDF4-206ENST00000478938 NMES1Q9C002 83 aa19.17■□□□□ 0.66
SDF4-206ENST00000478938 FRRS1LQ9P0K9 344 aa19.17■□□□□ 0.66
SDF4-206ENST00000478938 ZNF346Q9UL40 294 aaKnown RBP19.17■□□□□ 0.66
SDF4-206ENST00000478938 ELOA3CA0A087WX78 387 aaPredicted RBP19.17■□□□□ 0.66
SDF4-206ENST00000478938 EIF1AYO14602 144 aaKnown RBP19.17■□□□□ 0.66
SDF4-206ENST00000478938 TRGC2P03986 189 aa19.17■□□□□ 0.66
SDF4-206ENST00000478938 PRKAR2AP13861 404 aaKnown RBP19.17■□□□□ 0.66
SDF4-206ENST00000478938 TIMP2P16035 220 aa19.17■□□□□ 0.66
SDF4-206ENST00000478938 MAPK8P45983 427 aa19.17■□□□□ 0.66
SDF4-206ENST00000478938 EIF1AXP47813 144 aaKnown RBP19.17■□□□□ 0.66
SDF4-206ENST00000478938 OR1G1P47890 313 aa19.17■□□□□ 0.66
SDF4-206ENST00000478938 RAB1AP62820 205 aa19.17■□□□□ 0.66
SDF4-206ENST00000478938 SLC7A9P82251 487 aa19.17■□□□□ 0.66
SDF4-206ENST00000478938 OR1Q1Q15612 314 aa19.17■□□□□ 0.66
SDF4-206ENST00000478938 TOMM34Q15785 309 aaPredicted RBP19.17■□□□□ 0.66
SDF4-206ENST00000478938 AKR1C8PQ5T2L2 129 aa19.17■□□□□ 0.66
SDF4-206ENST00000478938 OR2T2Q6IF00 324 aa19.17■□□□□ 0.66
SDF4-206ENST00000478938 GPR137CQ8N3F9 429 aa19.17■□□□□ 0.66
SDF4-206ENST00000478938 CNRIP1Q96F85 164 aaPredicted RBP19.17■□□□□ 0.66
SDF4-206ENST00000478938 AQP10Q96PS8 301 aa19.17■□□□□ 0.66
SDF4-206ENST00000478938 OR52A5Q9H2C5 316 aa19.17■□□□□ 0.66
SDF4-206ENST00000478938 SMCO3A2RU48 225 aa19.16■□□□□ 0.66
SDF4-206ENST00000478938 NDUFS4O43181 175 aa19.16■□□□□ 0.66
SDF4-206ENST00000478938 LYPD3O95274 346 aa19.16■□□□□ 0.66
SDF4-206ENST00000478938 HKR1P10072 659 aa19.16■□□□□ 0.66
SDF4-206ENST00000478938 GGTLC2Q14390 218 aa19.16■□□□□ 0.66
SDF4-206ENST00000478938 ARHGAP11AQ6P4F7 1023 aa19.16■□□□□ 0.66
SDF4-206ENST00000478938 RSPO2Q6UXX9 243 aaPredicted RBP19.16■□□□□ 0.66
SDF4-206ENST00000478938 SLC39A5Q6ZMH5 540 aa19.16■□□□□ 0.66
SDF4-206ENST00000478938 NUP43Q8NFH3 380 aa19.16■□□□□ 0.66
SDF4-206ENST00000478938 OR2AP1Q8NGE2 309 aa19.16■□□□□ 0.66
SDF4-206ENST00000478938 ZPLD1Q8TCW7 415 aa19.16■□□□□ 0.66
SDF4-206ENST00000478938 PLD4Q96BZ4 506 aa19.16■□□□□ 0.66
SDF4-206ENST00000478938 ZDHHC6Q9H6R6 413 aa19.16■□□□□ 0.66
SDF4-206ENST00000478938 FBXO7Q9Y3I1 522 aa19.16■□□□□ 0.66
SDF4-206ENST00000478938 LEFTY1O75610 366 aa19.16■□□□□ 0.66
SDF4-206ENST00000478938 INSM1Q01101 510 aaPredicted RBP19.16■□□□□ 0.66
SDF4-206ENST00000478938 ZNF616Q08AN1 781 aa19.16■□□□□ 0.66
SDF4-206ENST00000478938 TMEM220Q6QAJ8 160 aa19.16■□□□□ 0.66
SDF4-206ENST00000478938 TMEM64Q6YI46 380 aa19.16■□□□□ 0.66
SDF4-206ENST00000478938 BEND2Q8NDZ0 799 aa19.16■□□□□ 0.66
SDF4-206ENST00000478938 TMEM104Q8NE00 496 aa19.16■□□□□ 0.66
SDF4-206ENST00000478938 NOL4LQ96MY1 436 aaPredicted RBP19.16■□□□□ 0.66
SDF4-206ENST00000478938 G6PC3Q9BUM1 346 aa19.16■□□□□ 0.66
SDF4-206ENST00000478938 SLCO1B1Q9Y6L6 691 aa19.16■□□□□ 0.66
SDF4-206ENST00000478938 NUP210LQ5VU65 1888 aa19.15■□□□□ 0.66
SDF4-206ENST00000478938 TRBV5-5A0A0J9YX44 114 aa19.15■□□□□ 0.66
SDF4-206ENST00000478938 EFSO43281 561 aa19.15■□□□□ 0.66
SDF4-206ENST00000478938 PRSS54Q6PEW0 395 aa19.15■□□□□ 0.66
SDF4-206ENST00000478938 TRAPPC5Q8IUR0 188 aa19.15■□□□□ 0.66
SDF4-206ENST00000478938 OR56A1Q8NGH5 318 aa19.15■□□□□ 0.66
SDF4-206ENST00000478938 LYPD6BQ8NI32 183 aa19.15■□□□□ 0.66
SDF4-206ENST00000478938 FAM174AQ8TBP5 190 aa19.15■□□□□ 0.66
SDF4-206ENST00000478938 SLC35A4Q96G79 324 aa19.15■□□□□ 0.66
SDF4-206ENST00000478938 HIST1H2BLQ99880 126 aa19.15■□□□□ 0.66
SDF4-206ENST00000478938 TGIF2-C20orf24A0A0A6YYL0 155 aa19.15■□□□□ 0.66
SDF4-206ENST00000478938 DUS4LO95620 317 aaKnown RBP19.15■□□□□ 0.66
SDF4-206ENST00000478938 SPARCP09486 303 aa19.15■□□□□ 0.66
SDF4-206ENST00000478938 DIO1P49895 249 aa19.15■□□□□ 0.66
SDF4-206ENST00000478938 SCAND1P57086 179 aa19.15■□□□□ 0.66
SDF4-206ENST00000478938 ZNHIT3Q15649 155 aaPredicted RBP19.15■□□□□ 0.66
SDF4-206ENST00000478938 RAB11BQ15907 218 aa19.15■□□□□ 0.66
SDF4-206ENST00000478938 COL13A1Q5TAT6 717 aaPredicted RBP19.15■□□□□ 0.66
SDF4-206ENST00000478938 GGNBP1Q5YKI7 109 aa19.15■□□□□ 0.66
SDF4-206ENST00000478938 FOXRED2Q8IWF2 684 aa19.15■□□□□ 0.66
SDF4-206ENST00000478938 PRSS58Q8IYP2 241 aa19.15■□□□□ 0.66
SDF4-206ENST00000478938 OR14K1Q8NGZ2 314 aa19.15■□□□□ 0.66
SDF4-206ENST00000478938 SFXN5Q8TD22 340 aa19.15■□□□□ 0.66
SDF4-206ENST00000478938 GRHL3Q8TE85 626 aa19.15■□□□□ 0.66
SDF4-206ENST00000478938 ZNF587Q96SQ5 575 aaPredicted RBP19.15■□□□□ 0.66
SDF4-206ENST00000478938 TMEM208Q9BTX3 173 aa19.15■□□□□ 0.66
SDF4-206ENST00000478938 KCNJ16Q9NPI9 418 aa19.15■□□□□ 0.66
SDF4-206ENST00000478938 MED31Q9Y3C7 131 aa19.15■□□□□ 0.66
SDF4-206ENST00000478938 MTCL1Q9Y4B5 1905 aaKnown RBP19.14■□□□□ 0.65
SDF4-206ENST00000478938 LOC100289279A0A1B0GTE1 492 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms