RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 KIR3DL3Q8N743 410 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 SIGLECL1Q8N7X8 197 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 OR2L5Q8NG80 312 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 FBXO30Q8TB52 745 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 RIT1Q92963 219 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 HAUS1Q96CS2 278 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 MS4A6EQ96DS6 147 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 BIRC8Q96P09 236 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 QKIQ96PU8 341 aaKnown RBP eCLIP3.59□□□□□ -1.83
VPS50-214ENST00000477935 ERGIC2Q96RQ1 377 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 SLC30A2Q9BRI3 323 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 FOLH1BQ9HBA9 442 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 MS4A12Q9NXJ0 267 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 DKKL1Q9UK85 242 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 CFL2Q9Y281 166 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 ZNF337Q9Y3M9 751 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 BZW2Q9Y6E2 419 aaKnown RBP3.59□□□□□ -1.83
VPS50-214ENST00000477935 NCKAP5O14513 1909 aa3.59□□□□□ -1.83
VPS50-214ENST00000477935 DNAH3Q8TD57 4116 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 OR5H1A6NKK0 313 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 A8MVM7 634 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 E5RI56 91 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 RTCAO00442 366 aaKnown RBP3.58□□□□□ -1.84
VPS50-214ENST00000477935 ACOX3O15254 700 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 ERI3O43414 337 aaKnown RBP3.58□□□□□ -1.84
VPS50-214ENST00000477935 SYNGR4O95473 234 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 PRB2P02812 416 aaPredicted RBP3.58□□□□□ -1.84
VPS50-214ENST00000477935 OPN1MWP04001 364 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 CRYBA1P05813 215 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 OPN1MW2P0DN77 364 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 OPN1MW3P0DN78 364 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 SELEP16581 610 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 HIST1H1TP22492 207 aaPredicted RBP3.58□□□□□ -1.84
VPS50-214ENST00000477935 GP5P40197 560 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 PTGDSP41222 190 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 CDKN2BP42772 138 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 PPOXP50336 477 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 TMEM33P57088 247 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 HERVK_113P63132 956 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 ERVK-8P63133 956 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 HMGCS1Q01581 520 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 UBXN1Q04323 297 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 KLHL30Q0D2K2 578 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 CDH17Q12864 832 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 SLAMF1Q13291 335 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 KCNJ11Q14654 390 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 SLMAPQ14BN4 828 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 STK11Q15831 433 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 HSP90AA4PQ58FG1 418 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 DUPD1Q68J44 220 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 ACSM5Q6NUN0 579 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 NEPROQ6NW34 567 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 BTNL8Q6UX41 500 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 TMEM64Q6YI46 380 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 CYHR1Q6ZMK1 362 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 OR4N5Q8IXE1 308 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 PRSS35Q8N3Z0 413 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 RNF10Q8N5U6 811 aaKnown RBP3.58□□□□□ -1.84
VPS50-214ENST00000477935 PRELID2Q8N945 189 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 OR52B6Q8NGF0 335 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 FAM110BQ8TC76 370 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 SLC26A7Q8TE54 656 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 SLC5A11Q8WWX8 675 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 ERVK-6Q9BXR3 956 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 RACGAP1Q9H0H5 632 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 PTGES2Q9H7Z7 377 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 HEXA-AS1Q9H8Q6 139 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 COPS7BQ9H9Q2 264 aaPredicted RBP3.58□□□□□ -1.84
VPS50-214ENST00000477935 PARVBQ9HBI1 364 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 CLEC4AQ9UMR7 237 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 ERVK-19Q9WJR5 959 aa3.58□□□□□ -1.84
VPS50-214ENST00000477935 LYSTQ99698 3801 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 IGHV3-38A0A0C4DH36 116 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 LCE6AA0A183 80 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 OR6C70A6NIJ9 312 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 SRRM5B3KS81 715 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 H0YC42 278 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 H7C0C1 242 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 ERLIN1O75477 346 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 CLPXO76031 633 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 NDUFA7O95182 113 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 C8GP07360 202 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 ALOX5P09917 674 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 H2AFZP0C0S5 128 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 SPP1P10451 314 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 PAX7P23759 505 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 AGTR1P30556 359 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 SLC1A1P43005 524 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 CDX1P47902 265 aaPredicted RBP3.57□□□□□ -1.84
VPS50-214ENST00000477935 ATP5OP48047 213 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 PLA2G16P53816 162 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 RAG2P55895 527 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 PSPHP78330 225 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 REEP5Q00765 189 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 ZP4Q12836 540 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 KRT31Q15323 416 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 SLC9A3R2Q15599 337 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 TRIP10Q15642 601 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 ADPRMQ3LIE5 342 aa3.57□□□□□ -1.84
VPS50-214ENST00000477935 CTSL3PQ5NE16 218 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms