RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 COX6B1P14854 86 aa17.33■□□□□ 0.36
ACTB-210ENST00000477812 ZNF823P16415 610 aa17.33■□□□□ 0.36
ACTB-210ENST00000477812 IDH3GP51553 393 aaPredicted RBP17.33■□□□□ 0.36
ACTB-210ENST00000477812 SCRN3Q0VDG4 424 aa17.33■□□□□ 0.36
ACTB-210ENST00000477812 TMED1Q13445 227 aa17.33■□□□□ 0.36
ACTB-210ENST00000477812 TMEM53Q6P2H8 277 aa17.33■□□□□ 0.36
ACTB-210ENST00000477812 CFAP77Q6ZQR2 320 aa17.33■□□□□ 0.36
ACTB-210ENST00000477812 ERI1Q8IV48 349 aaKnown RBP17.33■□□□□ 0.36
ACTB-210ENST00000477812 C8orf59Q8N0T1 100 aaPredicted RBP17.33■□□□□ 0.36
ACTB-210ENST00000477812 CPEB3Q8NE35 698 aaKnown RBP17.33■□□□□ 0.36
ACTB-210ENST00000477812 RFKQ969G6 155 aa17.33■□□□□ 0.36
ACTB-210ENST00000477812 MS4A3Q96HJ5 214 aa17.33■□□□□ 0.36
ACTB-210ENST00000477812 MAP6Q96JE9 813 aa17.33■□□□□ 0.36
ACTB-210ENST00000477812 PNRC2Q9NPJ4 139 aaKnown RBP17.33■□□□□ 0.36
ACTB-210ENST00000477812 H2AFY2Q9P0M6 372 aaPredicted RBP17.33■□□□□ 0.36
ACTB-210ENST00000477812 GDF2Q9UK05 429 aaPredicted RBP17.33■□□□□ 0.36
ACTB-210ENST00000477812 POLR1DQ9Y2S0 133 aa17.33■□□□□ 0.36
ACTB-210ENST00000477812 HECTD1Q9ULT8 2610 aa17.33■□□□□ 0.36
ACTB-210ENST00000477812 FAM221AA4D161 298 aa17.32■□□□□ 0.36
ACTB-210ENST00000477812 RAB36O95755 333 aa17.32■□□□□ 0.36
ACTB-210ENST00000477812 SPARCP09486 303 aa17.32■□□□□ 0.36
ACTB-210ENST00000477812 CD40P25942 277 aa17.32■□□□□ 0.36
ACTB-210ENST00000477812 NAA10P41227 235 aaPredicted RBP17.32■□□□□ 0.36
ACTB-210ENST00000477812 RAB39AQ14964 217 aa17.32■□□□□ 0.36
ACTB-210ENST00000477812 CCDC92Q53HC0 331 aaPredicted RBP17.32■□□□□ 0.36
ACTB-210ENST00000477812 BEX5Q5H9J7 111 aa17.32■□□□□ 0.36
ACTB-210ENST00000477812 NCMAPQ5T1S8 102 aa17.32■□□□□ 0.36
ACTB-210ENST00000477812 ZNF774Q6NX45 483 aa17.32■□□□□ 0.36
ACTB-210ENST00000477812 VASH1Q7L8A9 365 aaPredicted RBP17.32■□□□□ 0.36
ACTB-210ENST00000477812 SLC16A9Q7RTY1 509 aa17.32■□□□□ 0.36
ACTB-210ENST00000477812 OR10S1Q8NGN2 331 aa17.32■□□□□ 0.36
ACTB-210ENST00000477812 OR6N2Q8NGY6 317 aa17.32■□□□□ 0.36
ACTB-210ENST00000477812 AKR7LQ8NHP1 331 aa17.32■□□□□ 0.36
ACTB-210ENST00000477812 CNIH3Q8TBE1 160 aa17.32■□□□□ 0.36
ACTB-210ENST00000477812 ST7LQ8TDW4 575 aa17.32■□□□□ 0.36
ACTB-210ENST00000477812 CNN2Q99439 309 aaKnown RBP17.32■□□□□ 0.36
ACTB-210ENST00000477812 RNF121Q9H920 327 aa17.32■□□□□ 0.36
ACTB-210ENST00000477812 NGBQ9NPG2 151 aa17.32■□□□□ 0.36
ACTB-210ENST00000477812 CLN6Q9NWW5 311 aa17.32■□□□□ 0.36
ACTB-210ENST00000477812 FBXL3Q9UKT7 428 aa17.32■□□□□ 0.36
ACTB-210ENST00000477812 KLHDC2Q9Y2U9 406 aa17.32■□□□□ 0.36
ACTB-210ENST00000477812 ABCA4P78363 2273 aa17.32■□□□□ 0.36
ACTB-210ENST00000477812 OR6C6A6NF89 314 aa17.31■□□□□ 0.36
ACTB-210ENST00000477812 M0R1B8 84 aa17.31■□□□□ 0.36
ACTB-210ENST00000477812 CASKO14936 926 aa17.31■□□□□ 0.36
ACTB-210ENST00000477812 SYNGR3O43761 229 aa17.31■□□□□ 0.36
ACTB-210ENST00000477812 MRPL3P09001 348 aaKnown RBP17.31■□□□□ 0.36
ACTB-210ENST00000477812 MYF6P23409 242 aa17.31■□□□□ 0.36
ACTB-210ENST00000477812 PTAFRP25105 342 aa17.31■□□□□ 0.36
ACTB-210ENST00000477812 ZNF91Q05481 1191 aa17.31■□□□□ 0.36
ACTB-210ENST00000477812 BSPH1Q075Z2 132 aa17.31■□□□□ 0.36
ACTB-210ENST00000477812 SMN1Q16637 294 aaKnown RBP17.31■□□□□ 0.36
ACTB-210ENST00000477812 DPY19L4Q7Z388 723 aa17.31■□□□□ 0.36
ACTB-210ENST00000477812 THAP5Q7Z6K1 395 aa17.31■□□□□ 0.36
ACTB-210ENST00000477812 CDC20BQ86Y33 519 aa17.31■□□□□ 0.36
ACTB-210ENST00000477812 ZNF295-AS1Q8N0V1 137 aa17.31■□□□□ 0.36
ACTB-210ENST00000477812 GJC3Q8NFK1 279 aa17.31■□□□□ 0.36
ACTB-210ENST00000477812 OTOSQ8NHW6 89 aa17.31■□□□□ 0.36
ACTB-210ENST00000477812 SMAP2Q8WU79 429 aaPredicted RBP17.31■□□□□ 0.36
ACTB-210ENST00000477812 PLPPR2Q96GM1 343 aa17.31■□□□□ 0.36
ACTB-210ENST00000477812 Q96MT0 163 aa17.31■□□□□ 0.36
ACTB-210ENST00000477812 HS3ST6Q96QI5 342 aa17.31■□□□□ 0.36
ACTB-210ENST00000477812 TMEM204Q9BSN7 226 aa17.31■□□□□ 0.36
ACTB-210ENST00000477812 RAB26Q9ULW5 256 aa17.31■□□□□ 0.36
ACTB-210ENST00000477812 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.31■□□□□ 0.362e-27■□□□□ 8.5
ACTB-210ENST00000477812 DCHS2Q6V1P9 2916 aa17.31■□□□□ 0.36
ACTB-210ENST00000477812 BAHCC1Q9P281 2608 aa17.3■□□□□ 0.36
ACTB-210ENST00000477812 A6NNC1 897 aa17.3■□□□□ 0.36
ACTB-210ENST00000477812 SGCEO43556 437 aa17.3■□□□□ 0.36
ACTB-210ENST00000477812 GOSR1O95249 250 aa17.3■□□□□ 0.36
ACTB-210ENST00000477812 SBK2P0C263 348 aa17.3■□□□□ 0.36
ACTB-210ENST00000477812 DBTP11182 482 aaKnown RBP17.3■□□□□ 0.36
ACTB-210ENST00000477812 MTNR1AP48039 350 aa17.3■□□□□ 0.36
ACTB-210ENST00000477812 NUDT6P53370 316 aa17.3■□□□□ 0.36
ACTB-210ENST00000477812 SPOCK1Q08629 439 aa17.3■□□□□ 0.36
ACTB-210ENST00000477812 CDK5R2Q13319 367 aa17.3■□□□□ 0.36
ACTB-210ENST00000477812 RAB35Q15286 201 aa17.3■□□□□ 0.36
ACTB-210ENST00000477812 KRTAP27-1Q3LI81 207 aa17.3■□□□□ 0.36
ACTB-210ENST00000477812 HIST2H2BCQ6DN03 193 aa17.3■□□□□ 0.36
ACTB-210ENST00000477812 TMEM108Q6UXF1 575 aa17.3■□□□□ 0.36
ACTB-210ENST00000477812 DCXRQ7Z4W1 244 aa17.3■□□□□ 0.36
ACTB-210ENST00000477812 AMELYQ99218 206 aa17.3■□□□□ 0.36
ACTB-210ENST00000477812 CDADC1Q9BWV3 514 aa17.3■□□□□ 0.36
ACTB-210ENST00000477812 YIPF3Q9GZM5 350 aa17.3■□□□□ 0.36
ACTB-210ENST00000477812 ATPIF1Q9UII2 106 aa17.3■□□□□ 0.36
ACTB-210ENST00000477812 RTTNQ86VV8 2226 aa17.3■□□□□ 0.36
ACTB-210ENST00000477812 HRNRQ86YZ3 2850 aaPredicted RBP17.29■□□□□ 0.36
ACTB-210ENST00000477812 LOC100509620A0A075B734 347 aa17.29■□□□□ 0.36
ACTB-210ENST00000477812 J3QRE1 110 aa17.29■□□□□ 0.36
ACTB-210ENST00000477812 DOK2O60496 412 aa17.29■□□□□ 0.36
ACTB-210ENST00000477812 COX5BP10606 129 aa17.29■□□□□ 0.36
ACTB-210ENST00000477812 ALOX5APP20292 161 aa17.29■□□□□ 0.36
ACTB-210ENST00000477812 APEX1P27695 318 aaKnown RBP17.29■□□□□ 0.36
ACTB-210ENST00000477812 CALCRP30988 508 aa17.29■□□□□ 0.36
ACTB-210ENST00000477812 NR1H2P55055 460 aa17.29■□□□□ 0.36
ACTB-210ENST00000477812 NAAAQ02083 359 aa17.29■□□□□ 0.36
ACTB-210ENST00000477812 POU4F2Q12837 409 aa17.29■□□□□ 0.36
ACTB-210ENST00000477812 ELFN2Q5R3F8 820 aa17.29■□□□□ 0.36
ACTB-210ENST00000477812 SHFQ7M4L6 423 aa17.29■□□□□ 0.36
ACTB-210ENST00000477812 PAQR4Q8N4S7 273 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms