RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 CLOCKO15516 846 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 ZNF207O43670 478 aaKnown RBP1.42□□□□□ -2.18
CACUL1-202ENST00000477583 FOXH1O75593 365 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 SNX4O95219 450 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 ACSM4P0C7M7 580 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 LINC00869P0C866 280 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 UBTFL6P0CB48 400 aaPredicted RBP1.42□□□□□ -2.18
CACUL1-202ENST00000477583 ZNF24P17028 368 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 FOXN2P32314 431 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 CEACAM3P40198 252 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 CDH6P55285 790 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 KRTAP10-10P60014 251 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 ADARB1P78563 741 aaKnown RBP1.42□□□□□ -2.18
CACUL1-202ENST00000477583 HMGN5P82970 282 aaKnown RBP1.42□□□□□ -2.18
CACUL1-202ENST00000477583 SHHQ15465 462 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 MRPL23Q16540 153 aaKnown RBP1.42□□□□□ -2.18
CACUL1-202ENST00000477583 XKR7Q5GH72 579 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 SOHLH1Q5JUK2 328 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 FAM78AQ5JUQ0 283 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 PPM1LQ5SGD2 360 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 THEM4Q5T1C6 240 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 METTL21CQ5VZV1 264 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 ZNF880Q6PDB4 577 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 CDH26Q8IXH8 852 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 RNF182Q8N6D2 247 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 PRELID2Q8N945 189 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 OR7G2Q8NG99 324 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 OR56B2PQ8NGI1 322 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 ZNF461Q8TAF7 563 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 ACMSDQ8TDX5 336 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 ELMO1Q92556 727 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 ESR2Q92731 530 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 RASD2Q96D21 266 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 SEH1LQ96EE3 360 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 NUP58Q9BVL2 599 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 ANKRA2Q9H9E1 313 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 SAMSN1Q9NSI8 373 aaKnown RBP1.42□□□□□ -2.18
CACUL1-202ENST00000477583 FAM49BQ9NUQ9 324 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 GPATCH2LQ9NWQ4 482 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 CTSFQ9UBX1 484 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 RFNGQ9Y644 331 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 MYO10Q9HD67 2058 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 ERCC6Q03468 1493 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 GRIN2BQ13224 1484 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 GAPVD1Q14C86 1478 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 SNAPC4Q5SXM2 1469 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 ARAP1Q96P48 1450 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 ADAMTS12P58397 1594 aa1.42□□□□□ -2.18
CACUL1-202ENST00000477583 NUP160Q12769 1436 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 ADAMTS13Q76LX8 1427 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 URB2Q14146 1524 aaKnown RBP1.41□□□□□ -2.18
CACUL1-202ENST00000477583 EHBP1L1Q8N3D4 1523 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 KIAA0586Q9BVV6 1533 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 TARBP1Q13395 1621 aaKnown RBP1.41□□□□□ -2.18
CACUL1-202ENST00000477583 IGLV1-36A0A0B4J1U3 117 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 C7orf66A4D0T2 115 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 GOLGA8OA6NCC3 632 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 SERPINE3A8MV23 424 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 GOLGA8NF8WBI6 632 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 UBXN8O00124 270 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 AIM2O14862 343 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 RNF13O43567 381 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 KLHL41O60662 606 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 GCM2O75603 506 aaPredicted RBP1.41□□□□□ -2.18
CACUL1-202ENST00000477583 CIB2O75838 187 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 OR2J3O76001 311 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 TROVE2P10155 538 aaKnown RBP eCLIP1.41□□□□□ -2.18
CACUL1-202ENST00000477583 TCN2P20062 427 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 F2RP25116 425 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 DCKP27707 260 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 GDI1P31150 447 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 TNNT2P45379 298 aaPredicted RBP1.41□□□□□ -2.18
CACUL1-202ENST00000477583 CX3CR1P49238 355 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 CSNK1EP49674 416 aaKnown RBP1.41□□□□□ -2.18
CACUL1-202ENST00000477583 CDH17Q12864 832 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 RCAN2Q14206 197 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 CHRNA6Q15825 494 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 ZNF726P1Q15940 193 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 SNRNP35Q16560 246 aaKnown RBP1.41□□□□□ -2.18
CACUL1-202ENST00000477583 SMUG1Q53HV7 270 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 PRAMEF20Q5VT98 475 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 IGFL1Q6UW32 110 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 TMEM205Q6UW68 189 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 ZYG11AQ6WRX3 759 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 CERS6Q6ZMG9 384 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 SHISA6Q6ZSJ9 500 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 HMGN2P46Q86SG4 172 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 LGI3Q8N145 548 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 GTPBP8Q8N3Z3 284 aaPredicted RBP1.41□□□□□ -2.18
CACUL1-202ENST00000477583 OR2A1Q8NGT9 310 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 COQ8AQ8NI60 647 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 RAB3IL1Q8TBN0 382 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 C15orf40Q8WUR7 153 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 NTAN1Q96AB6 310 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 MRGPRFQ96AM1 343 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 NARS2Q96I59 477 aaKnown RBP1.41□□□□□ -2.18
CACUL1-202ENST00000477583 LINC00477Q96M19 166 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 ZNF578Q96N58 590 aaPredicted RBP1.41□□□□□ -2.18
CACUL1-202ENST00000477583 ZNF382Q96SR6 550 aa1.41□□□□□ -2.18
CACUL1-202ENST00000477583 SPNS1Q9H2V7 528 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms