RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 LPAR2Q9HBW0 351 aa13.4□□□□□ -0.26
CLDN11-204ENST00000477531 EMC7Q9NPA0 242 aa13.4□□□□□ -0.26
CLDN11-204ENST00000477531 HIF1ANQ9NWT6 349 aa13.4□□□□□ -0.26
CLDN11-204ENST00000477531 MAGEL2Q9UJ55 1249 aa13.4□□□□□ -0.26
CLDN11-204ENST00000477531 TEX13CA0A0J9YWL9 993 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 UNC119BA6NIH7 251 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 SGCEO43556 437 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 TIMM8AO60220 97 aaPredicted RBP13.39□□□□□ -0.27
CLDN11-204ENST00000477531 DOK2O60496 412 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 PTP4A3O75365 173 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 MSMBP08118 114 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 TUBG1P23258 451 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 MPV17P39210 176 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 MVKQ03426 396 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 SCGB2A2Q13296 93 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 DPY19L2P2Q6ZN68 376 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 RFPL4BQ6ZWI9 263 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 FAM122BQ7Z309 247 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 ADCK1Q86TW2 530 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 GLB1L2Q8IW92 636 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 RFLNBQ8N5W9 214 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 NPEPL1Q8NDH3 523 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 OR52J3Q8NH60 311 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 TMEM186Q96B77 213 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 RASD2Q96D21 266 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 RAB39BQ96DA2 213 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 PYURFQ96I23 114 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 C7orf34Q96L11 122 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 TUBG2Q9NRH3 451 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 PLEK2Q9NYT0 353 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 ZDHHC8Q9ULC8 765 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 SIGLEC7Q9Y286 467 aa13.39□□□□□ -0.27
CLDN11-204ENST00000477531 TRAV20A0A0B4J274 112 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 TRBV4-1A0A0J9YWV2 114 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 SOCS2O14508 198 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 SLC16A7O60669 478 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 ICMTO60725 284 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 DIRAS1O95057 198 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 NGFP01138 241 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 IGHV1-46P01743 117 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 CTLA4P16410 223 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 IFNGR2P38484 337 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 OMPP47874 163 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 LIMS1P48059 325 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 CENPAP49450 140 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 MMP15P51511 669 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 SPIBQ01892 262 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 AQP6Q13520 282 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 SAMD4BQ5PRF9 694 aaKnown RBP13.38□□□□□ -0.27
CLDN11-204ENST00000477531 AVPI1Q5T686 147 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 ACSM5Q6NUN0 579 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 SHQ1Q6PI26 577 aaKnown RBP13.38□□□□□ -0.27
CLDN11-204ENST00000477531 DNM1P34Q6PK57 102 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 TSEN54Q7Z6J9 526 aaKnown RBP13.38□□□□□ -0.27
CLDN11-204ENST00000477531 PEG10Q86TG7 708 aaKnown RBP13.38□□□□□ -0.27
CLDN11-204ENST00000477531 TEX29Q8N6K0 151 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 CCL17Q92583 94 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 GTF3AQ92664 365 aaKnown RBP13.38□□□□□ -0.27
CLDN11-204ENST00000477531 NSMCE2Q96MF7 247 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 COG8Q96MW5 612 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 LRRC37BQ96QE4 947 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 GPX7Q96SL4 187 aaPredicted RBP13.38□□□□□ -0.27
CLDN11-204ENST00000477531 SYT4Q9H2B2 425 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 ZNF665Q9H7R5 613 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 NRIP3Q9NQ35 241 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 TBCCD1Q9NVR7 557 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 METRNQ9UJH8 293 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 POLR1DQ9Y2S0 133 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 IER3IP1Q9Y5U9 82 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 V9GYQ6 96 aa13.38□□□□□ -0.27
CLDN11-204ENST00000477531 FAM157AC9JC47 383 aa13.37□□□□□ -0.27
CLDN11-204ENST00000477531 WNT9BO14905 357 aa13.37□□□□□ -0.27
CLDN11-204ENST00000477531 TCF21O43680 179 aa13.37□□□□□ -0.27
CLDN11-204ENST00000477531 GADD45GO95257 159 aa13.37□□□□□ -0.27
CLDN11-204ENST00000477531 SCG5P05408 212 aa13.37□□□□□ -0.27
CLDN11-204ENST00000477531 HSD17B1P14061 328 aa13.37□□□□□ -0.27
CLDN11-204ENST00000477531 ZNF26P17031 533 aaPredicted RBP13.37□□□□□ -0.27
CLDN11-204ENST00000477531 TNFSF4P23510 183 aa13.37□□□□□ -0.27
CLDN11-204ENST00000477531 CRABP1P29762 137 aa13.37□□□□□ -0.27
CLDN11-204ENST00000477531 LMO4P61968 165 aa13.37□□□□□ -0.27
CLDN11-204ENST00000477531 LSM6P62312 80 aaKnown RBP13.37□□□□□ -0.27
CLDN11-204ENST00000477531 KRTAP24-1Q3LI83 254 aa13.37□□□□□ -0.27
CLDN11-204ENST00000477531 MTX3Q5HYI7 312 aa13.37□□□□□ -0.27
CLDN11-204ENST00000477531 PGM2L1Q6PCE3 622 aa13.37□□□□□ -0.27
CLDN11-204ENST00000477531 SMARCD3Q6STE5 483 aa13.37□□□□□ -0.27
CLDN11-204ENST00000477531 PGAM4Q8N0Y7 254 aa13.37□□□□□ -0.27
CLDN11-204ENST00000477531 DHRS1Q96LJ7 313 aa13.37□□□□□ -0.27
CLDN11-204ENST00000477531 NDE1Q9NXR1 346 aa13.37□□□□□ -0.27
CLDN11-204ENST00000477531 VSX1Q9NZR4 365 aaPredicted RBP13.37□□□□□ -0.27
CLDN11-204ENST00000477531 IL20RAQ9UHF4 553 aa13.37□□□□□ -0.27
CLDN11-204ENST00000477531 TMCC3Q9ULS5 477 aa13.37□□□□□ -0.27
CLDN11-204ENST00000477531 COA3Q9Y2R0 106 aaPredicted RBP13.37□□□□□ -0.27
CLDN11-204ENST00000477531 ZSCAN5BA6NJL1 495 aa13.36□□□□□ -0.27
CLDN11-204ENST00000477531 ADH4P08319 380 aa13.36□□□□□ -0.27
CLDN11-204ENST00000477531 SLC6A6P31641 620 aa13.36□□□□□ -0.27
CLDN11-204ENST00000477531 MXRA7P84157 204 aa13.36□□□□□ -0.27
CLDN11-204ENST00000477531 PSG7Q13046 419 aa13.36□□□□□ -0.27
CLDN11-204ENST00000477531 SEC23BQ15437 767 aa13.36□□□□□ -0.27
CLDN11-204ENST00000477531 FAHD2BQ6P2I3 314 aaPredicted RBP13.36□□□□□ -0.27
CLDN11-204ENST00000477531 THSD4Q6ZMP0 1018 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms