RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 FBXW4P57775 412 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 RPL23AP62750 156 aaKnown RBP3.01□□□□□ -1.93
PTCD3-211ENST00000476215 FKBP1AP62942 108 aaKnown RBP3.01□□□□□ -1.93
PTCD3-211ENST00000476215 RPS21P63220 83 aaKnown RBP3.01□□□□□ -1.93
PTCD3-211ENST00000476215 DEFB116Q30KQ4 102 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 MAJINQ3KP22 176 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 KDELC1Q6UW63 502 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 LINC00173Q6ZV60 143 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 RUFY3Q7L099 469 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 EGFL6Q8IUX8 553 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 C12orf56Q8IXR9 622 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 SAXO1Q8IYX7 474 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 Q8N976 141 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 OR4F6Q8NGB9 312 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 LRRC58Q96CX6 371 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 FOPNLQ96NB1 174 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 SH3GL1Q99961 368 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 OSBPL10Q9BXB5 764 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 LHX9Q9NQ69 397 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 CYTL1Q9NRR1 136 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 COX16Q9P0S2 106 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 IKZF2Q9UKS7 526 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 DDX60Q8IY21 1712 aaKnown RBP3.01□□□□□ -1.93
PTCD3-211ENST00000476215 ZNF609O15014 1411 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 LAMB2P55268 1798 aa3□□□□□ -1.93
PTCD3-211ENST00000476215 PPIAL4EA0A075B759 164 aa3□□□□□ -1.93
PTCD3-211ENST00000476215 DLGAP1O14490 977 aa3□□□□□ -1.93
PTCD3-211ENST00000476215 GOSR2O14653 212 aa3□□□□□ -1.93
PTCD3-211ENST00000476215 ANGPTL7O43827 346 aa3□□□□□ -1.93
PTCD3-211ENST00000476215 SOX15O60248 233 aa3□□□□□ -1.93
PTCD3-211ENST00000476215 ZNF324O75467 553 aaPredicted RBP3□□□□□ -1.93
PTCD3-211ENST00000476215 TMEM50AO95807 157 aa3□□□□□ -1.93
PTCD3-211ENST00000476215 SMIM10L1P0DMW3 83 aa3□□□□□ -1.93
PTCD3-211ENST00000476215 PPIAL4FP0DN26 164 aa3□□□□□ -1.93
PTCD3-211ENST00000476215 NCF2P19878 526 aaPredicted RBP3□□□□□ -1.93
PTCD3-211ENST00000476215 RORCP51449 518 aa3□□□□□ -1.93
PTCD3-211ENST00000476215 NCBP2P52298 156 aaKnown RBP eCLIP3□□□□□ -1.93
PTCD3-211ENST00000476215 LINC00315P59091 139 aa3□□□□□ -1.93
PTCD3-211ENST00000476215 IRX3P78415 501 aaPredicted RBP3□□□□□ -1.93
PTCD3-211ENST00000476215 TTLL9Q3SXZ7 439 aa3□□□□□ -1.93
PTCD3-211ENST00000476215 RABL6Q3YEC7 729 aaPredicted RBP3□□□□□ -1.93
PTCD3-211ENST00000476215 LCE1CQ5T751 118 aa3□□□□□ -1.93
PTCD3-211ENST00000476215 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
PTCD3-211ENST00000476215 LYPD2Q6UXB3 125 aa3□□□□□ -1.93
PTCD3-211ENST00000476215 C19orf35Q6ZS72 473 aa3□□□□□ -1.93
PTCD3-211ENST00000476215 SLC25A48Q6ZT89 311 aaKnown RBP3□□□□□ -1.93
PTCD3-211ENST00000476215 LHFPL3Q86UP9 236 aa3□□□□□ -1.93
PTCD3-211ENST00000476215 MREGQ8N565 214 aa3□□□□□ -1.93
PTCD3-211ENST00000476215 SLC22A8Q8TCC7 542 aa3□□□□□ -1.93
PTCD3-211ENST00000476215 ZFP90Q8TF47 636 aa3□□□□□ -1.93
PTCD3-211ENST00000476215 EXOSC8Q96B26 276 aaKnown RBP3□□□□□ -1.93
PTCD3-211ENST00000476215 SMIM10Q96HG1 83 aa3□□□□□ -1.93
PTCD3-211ENST00000476215 BMFQ96LC9 184 aa3□□□□□ -1.93
PTCD3-211ENST00000476215 TSSK3Q96PN8 268 aa3□□□□□ -1.93
PTCD3-211ENST00000476215 CENPFP49454 3210 aa3□□□□□ -1.93
PTCD3-211ENST00000476215 SCN9AQ15858 1988 aa3□□□□□ -1.93
PTCD3-211ENST00000476215 CASP8AP2Q9UKL3 1982 aa3□□□□□ -1.93
PTCD3-211ENST00000476215 MROH5Q6ZUA9 1318 aa2.99□□□□□ -1.93
PTCD3-211ENST00000476215 TRPM7Q96QT4 1865 aa2.99□□□□□ -1.93
PTCD3-211ENST00000476215 ZNF726A6NNF4 738 aa2.99□□□□□ -1.93
PTCD3-211ENST00000476215 DYNC1I1O14576 645 aa2.99□□□□□ -1.93
PTCD3-211ENST00000476215 SERPINA3P01011 423 aa2.99□□□□□ -1.93
PTCD3-211ENST00000476215 AK4P27144 223 aaPredicted RBP2.99□□□□□ -1.93
PTCD3-211ENST00000476215 MNAT1P51948 309 aa2.99□□□□□ -1.93
PTCD3-211ENST00000476215 BST1Q10588 318 aa2.99□□□□□ -1.93
PTCD3-211ENST00000476215 SLAQ13239 276 aa2.99□□□□□ -1.93
PTCD3-211ENST00000476215 CAVIN4Q5BKX8 364 aa2.99□□□□□ -1.93
PTCD3-211ENST00000476215 FKBP1CQ5VVH2 108 aa2.99□□□□□ -1.93
PTCD3-211ENST00000476215 APOBEC3HQ6NTF7 200 aaKnown RBP2.99□□□□□ -1.93
PTCD3-211ENST00000476215 UBE2J2Q8N2K1 259 aa2.99□□□□□ -1.93
PTCD3-211ENST00000476215 OR13C2Q8NGS9 318 aa2.99□□□□□ -1.93
PTCD3-211ENST00000476215 NT5C3BQ969T7 300 aa2.99□□□□□ -1.93
PTCD3-211ENST00000476215 TDRD3Q9H7E2 651 aaKnown RBP2.99□□□□□ -1.93
PTCD3-211ENST00000476215 LRRC37AA6NMS7 1700 aa2.99□□□□□ -1.93
PTCD3-211ENST00000476215 TET2Q6N021 2002 aaPredicted RBP2.98□□□□□ -1.93
PTCD3-211ENST00000476215 MKI67P46013 3256 aaKnown RBP2.98□□□□□ -1.93
PTCD3-211ENST00000476215 IGKV2-28A0A075B6P5 120 aa2.98□□□□□ -1.93
PTCD3-211ENST00000476215 KMOO15229 486 aa2.98□□□□□ -1.93
PTCD3-211ENST00000476215 EIF3GO75821 320 aaKnown RBP eCLIP2.98□□□□□ -1.93
PTCD3-211ENST00000476215 CIAO1O76071 339 aa2.98□□□□□ -1.93
PTCD3-211ENST00000476215 IGKV2D-28P01615 120 aa2.98□□□□□ -1.93
PTCD3-211ENST00000476215 KITLGP21583 273 aa2.98□□□□□ -1.93
PTCD3-211ENST00000476215 OMGP23515 440 aa2.98□□□□□ -1.93
PTCD3-211ENST00000476215 IFNA8P32881 189 aa2.98□□□□□ -1.93
PTCD3-211ENST00000476215 KCNJ2P63252 427 aa2.98□□□□□ -1.93
PTCD3-211ENST00000476215 SLC7A9P82251 487 aa2.98□□□□□ -1.93
PTCD3-211ENST00000476215 ZNF92Q03936 586 aa2.98□□□□□ -1.93
PTCD3-211ENST00000476215 ENPEPQ07075 957 aa2.98□□□□□ -1.93
PTCD3-211ENST00000476215 DDX39BQ13838 428 aaKnown RBP2.98□□□□□ -1.93
PTCD3-211ENST00000476215 PRPSAP1Q14558 356 aa2.98□□□□□ -1.93
PTCD3-211ENST00000476215 C16orf72Q14CZ0 275 aa2.98□□□□□ -1.93
PTCD3-211ENST00000476215 CEP55Q53EZ4 464 aa2.98□□□□□ -1.93
PTCD3-211ENST00000476215 STRADAQ7RTN6 431 aa2.98□□□□□ -1.93
PTCD3-211ENST00000476215 PEX26Q7Z412 305 aa2.98□□□□□ -1.93
PTCD3-211ENST00000476215 CEP112Q8N8E3 955 aa2.98□□□□□ -1.93
PTCD3-211ENST00000476215 CYB561D1Q8N8Q1 229 aa2.98□□□□□ -1.93
PTCD3-211ENST00000476215 TMEM54Q969K7 222 aa2.98□□□□□ -1.93
PTCD3-211ENST00000476215 SH3GL3Q99963 347 aa2.98□□□□□ -1.93
PTCD3-211ENST00000476215 CD84Q9UIB8 345 aa2.98□□□□□ -1.93
PTCD3-211ENST00000476215 KIAA1257Q9ULG3 409 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms