RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 DEAF1O75398 565 aaPredicted RBP15.76■□□□□ 0.11
COL7A1-209ENST00000474432 TXNDC12O95881 172 aa15.76■□□□□ 0.11
COL7A1-209ENST00000474432 MSMBP08118 114 aa15.76■□□□□ 0.11
COL7A1-209ENST00000474432 GCH1P30793 250 aa15.76■□□□□ 0.11
COL7A1-209ENST00000474432 CDKN2AP42771 156 aaKnown RBP15.76■□□□□ 0.11
COL7A1-209ENST00000474432 GYS2P54840 703 aa15.76■□□□□ 0.11
COL7A1-209ENST00000474432 MVKQ03426 396 aa15.76■□□□□ 0.11
COL7A1-209ENST00000474432 DBPQ10586 325 aaPredicted RBP15.76■□□□□ 0.11
COL7A1-209ENST00000474432 PSG7Q13046 419 aa15.76■□□□□ 0.11
COL7A1-209ENST00000474432 FAM209AQ5JX71 171 aa15.76■□□□□ 0.11
COL7A1-209ENST00000474432 GPR139Q6DWJ6 353 aa15.76■□□□□ 0.11
COL7A1-209ENST00000474432 VASH1Q7L8A9 365 aaPredicted RBP15.76■□□□□ 0.11
COL7A1-209ENST00000474432 ZER1Q7Z7L7 766 aa15.76■□□□□ 0.11
COL7A1-209ENST00000474432 C1orf174Q8IYL3 243 aa15.76■□□□□ 0.11
COL7A1-209ENST00000474432 OR52J3Q8NH60 311 aa15.76■□□□□ 0.11
COL7A1-209ENST00000474432 TMEM186Q96B77 213 aa15.76■□□□□ 0.11
COL7A1-209ENST00000474432 PYURFQ96I23 114 aa15.76■□□□□ 0.11
COL7A1-209ENST00000474432 LPAR2Q9HBW0 351 aa15.76■□□□□ 0.11
COL7A1-209ENST00000474432 ARL8BQ9NVJ2 186 aa15.76■□□□□ 0.11
COL7A1-209ENST00000474432 HIF1ANQ9NWT6 349 aa15.76■□□□□ 0.11
COL7A1-209ENST00000474432 COA3Q9Y2R0 106 aaPredicted RBP15.76■□□□□ 0.11
COL7A1-209ENST00000474432 FAM32AQ9Y421 112 aaKnown RBP15.76■□□□□ 0.11
COL7A1-209ENST00000474432 IER3IP1Q9Y5U9 82 aa15.76■□□□□ 0.11
COL7A1-209ENST00000474432 V9GYQ6 96 aa15.76■□□□□ 0.11
COL7A1-209ENST00000474432 ARHGAP32A7KAX9 2087 aa15.75■□□□□ 0.11
COL7A1-209ENST00000474432 UNC119BA6NIH7 251 aa15.75■□□□□ 0.11
COL7A1-209ENST00000474432 DCTN6O00399 190 aa15.75■□□□□ 0.11
COL7A1-209ENST00000474432 SOCS2O14508 198 aa15.75■□□□□ 0.11
COL7A1-209ENST00000474432 XKRYO14609 159 aa15.75■□□□□ 0.11
COL7A1-209ENST00000474432 SLC16A7O60669 478 aa15.75■□□□□ 0.11
COL7A1-209ENST00000474432 UBOX5O94941 541 aa15.75■□□□□ 0.11
COL7A1-209ENST00000474432 RBMXP38159 391 aaKnown RBP15.75■□□□□ 0.11
COL7A1-209ENST00000474432 GUCA1AP43080 201 aaPredicted RBP15.75■□□□□ 0.11
COL7A1-209ENST00000474432 KCNMB1Q16558 191 aa15.75■□□□□ 0.11
COL7A1-209ENST00000474432 CCDC92Q53HC0 331 aaPredicted RBP15.75■□□□□ 0.11
COL7A1-209ENST00000474432 DPY19L2P2Q6ZN68 376 aa15.75■□□□□ 0.11
COL7A1-209ENST00000474432 PIGWQ7Z7B1 504 aa15.75■□□□□ 0.11
COL7A1-209ENST00000474432 SLC7A6Q92536 515 aa15.75■□□□□ 0.11
COL7A1-209ENST00000474432 NUAK2Q9H093 628 aa15.75■□□□□ 0.11
COL7A1-209ENST00000474432 SAP30LQ9HAJ7 183 aa15.75■□□□□ 0.11
COL7A1-209ENST00000474432 DECR2Q9NUI1 292 aa15.75■□□□□ 0.11
COL7A1-209ENST00000474432 TBCCD1Q9NVR7 557 aa15.75■□□□□ 0.11
COL7A1-209ENST00000474432 NDRG4Q9ULP0 352 aaKnown RBP15.75■□□□□ 0.11
COL7A1-209ENST00000474432 WIPI2Q9Y4P8 454 aa15.75■□□□□ 0.11
COL7A1-209ENST00000474432 WNK2Q9Y3S1 2297 aa15.74■□□□□ 0.11
COL7A1-209ENST00000474432 OR6C6A6NF89 314 aa15.74■□□□□ 0.11
COL7A1-209ENST00000474432 SGCEO43556 437 aa15.74■□□□□ 0.11
COL7A1-209ENST00000474432 DOK2O60496 412 aa15.74■□□□□ 0.11
COL7A1-209ENST00000474432 KHDRBS3O75525 346 aaKnown RBP15.74■□□□□ 0.11
COL7A1-209ENST00000474432 GPANK1O95872 356 aa15.74■□□□□ 0.11
COL7A1-209ENST00000474432 CD55P08174 381 aa15.74■□□□□ 0.11
COL7A1-209ENST00000474432 LSM6P62312 80 aaKnown RBP15.74■□□□□ 0.11
COL7A1-209ENST00000474432 SCRN3Q0VDG4 424 aa15.74■□□□□ 0.11
COL7A1-209ENST00000474432 UNQ6126/PRO20091Q6UXV3 157 aa15.74■□□□□ 0.11
COL7A1-209ENST00000474432 Q6ZR03 302 aa15.74■□□□□ 0.11
COL7A1-209ENST00000474432 RINLQ6ZS11 566 aa15.74■□□□□ 0.11
COL7A1-209ENST00000474432 C1orf229Q6ZS94 237 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-209ENST00000474432 GLCCI1Q86VQ1 547 aa15.74■□□□□ 0.11
COL7A1-209ENST00000474432 GLB1L2Q8IW92 636 aa15.74■□□□□ 0.11
COL7A1-209ENST00000474432 PGAM4Q8N0Y7 254 aa15.74■□□□□ 0.11
COL7A1-209ENST00000474432 TSSK2Q96PF2 358 aa15.74■□□□□ 0.11
COL7A1-209ENST00000474432 C19orf24Q9BVV8 132 aa15.74■□□□□ 0.11
COL7A1-209ENST00000474432 REPIN1Q9BWE0 567 aaKnown RBP15.74■□□□□ 0.11
COL7A1-209ENST00000474432 ZNF665Q9H7R5 613 aa15.74■□□□□ 0.11
COL7A1-209ENST00000474432 ELOVL3Q9HB03 270 aa15.74■□□□□ 0.11
COL7A1-209ENST00000474432 MSL2Q9HCI7 577 aa15.74■□□□□ 0.11
COL7A1-209ENST00000474432 G6PC2Q9NQR9 355 aa15.74■□□□□ 0.11
COL7A1-209ENST00000474432 DCAF16Q9NXF7 216 aa15.74■□□□□ 0.11
COL7A1-209ENST00000474432 ASH2LQ9UBL3 628 aa15.74■□□□□ 0.11
COL7A1-209ENST00000474432 STARD10Q9Y365 291 aa15.74■□□□□ 0.11
COL7A1-209ENST00000474432 DYSFO75923 2080 aa15.73■□□□□ 0.11
COL7A1-209ENST00000474432 IGLV1-36A0A0B4J1U3 117 aa15.73■□□□□ 0.11
COL7A1-209ENST00000474432 ARPC2O15144 300 aa15.73■□□□□ 0.11
COL7A1-209ENST00000474432 AVPP01185 164 aa15.73■□□□□ 0.11
COL7A1-209ENST00000474432 MT-ND5P03915 603 aa15.73■□□□□ 0.11
COL7A1-209ENST00000474432 HTR5AP47898 357 aa15.73■□□□□ 0.11
COL7A1-209ENST00000474432 ERFP50548 548 aa15.73■□□□□ 0.11
COL7A1-209ENST00000474432 HIST1H3AP68431 136 aa15.73■□□□□ 0.11
COL7A1-209ENST00000474432 TEKQ02763 1124 aa15.73■□□□□ 0.11
COL7A1-209ENST00000474432 CDK5R2Q13319 367 aa15.73■□□□□ 0.11
COL7A1-209ENST00000474432 AQP6Q13520 282 aa15.73■□□□□ 0.11
COL7A1-209ENST00000474432 HIST2H3PS2Q5TEC6 136 aa15.73■□□□□ 0.11
COL7A1-209ENST00000474432 SMARCD3Q6STE5 483 aa15.73■□□□□ 0.11
COL7A1-209ENST00000474432 HIST2H3AQ71DI3 136 aa15.73■□□□□ 0.11
COL7A1-209ENST00000474432 CPLX4Q7Z7G2 160 aa15.73■□□□□ 0.11
COL7A1-209ENST00000474432 ADCK1Q86TW2 530 aa15.73■□□□□ 0.11
COL7A1-209ENST00000474432 ELMOD3Q96FG2 381 aa15.73■□□□□ 0.11
COL7A1-209ENST00000474432 LRRC37BQ96QE4 947 aa15.73■□□□□ 0.11
COL7A1-209ENST00000474432 CDRT15Q96T59 188 aa15.73■□□□□ 0.11
COL7A1-209ENST00000474432 AURKCQ9UQB9 309 aa15.73■□□□□ 0.11
COL7A1-209ENST00000474432 PLSCR5A0PG75 271 aa15.72■□□□□ 0.11
COL7A1-209ENST00000474432 CLDN25C9JDP6 229 aa15.72■□□□□ 0.11
COL7A1-209ENST00000474432 RER1O15258 196 aa15.72■□□□□ 0.11
COL7A1-209ENST00000474432 TPD52L2O43399 206 aaKnown RBP15.72■□□□□ 0.11
COL7A1-209ENST00000474432 GADD45GO95257 159 aa15.72■□□□□ 0.11
COL7A1-209ENST00000474432 PPP1R3DO95685 299 aa15.72■□□□□ 0.11
COL7A1-209ENST00000474432 ABHD16AO95870 558 aa15.72■□□□□ 0.11
COL7A1-209ENST00000474432 IGHV2-5P01817 119 aa15.72■□□□□ 0.11
COL7A1-209ENST00000474432 KITLGP21583 273 aa15.72■□□□□ 0.11
COL7A1-209ENST00000474432 LIPAP38571 399 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms