RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 BHLHE23Q8NDY6 225 aa16.77■□□□□ 0.27
ECHDC1-214ENST00000474289 TCTEX1D2Q8WW35 142 aa16.77■□□□□ 0.27
ECHDC1-214ENST00000474289 ROBO4Q8WZ75 1007 aa16.77■□□□□ 0.27
ECHDC1-214ENST00000474289 SUSD6Q92537 303 aa16.77■□□□□ 0.27
ECHDC1-214ENST00000474289 ZNF775Q96BV0 537 aaPredicted RBP16.77■□□□□ 0.27
ECHDC1-214ENST00000474289 AKR1E2Q96JD6 320 aa16.77■□□□□ 0.27
ECHDC1-214ENST00000474289 LRRC3BQ96PB8 259 aa16.77■□□□□ 0.27
ECHDC1-214ENST00000474289 NMES1Q9C002 83 aa16.77■□□□□ 0.27
ECHDC1-214ENST00000474289 CGGBP1Q9UFW8 167 aaPredicted RBP16.77■□□□□ 0.27
ECHDC1-214ENST00000474289 TIMM10BQ9Y5J6 103 aa16.77■□□□□ 0.27
ECHDC1-214ENST00000474289 MRPS18BQ9Y676 258 aaKnown RBP16.77■□□□□ 0.27
ECHDC1-214ENST00000474289 GPANK1O95872 356 aa16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 ACKR3P25106 362 aa16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 SLC6A9P48067 706 aa16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 ARRB1P49407 418 aaPredicted RBP16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 PRICKLE4Q2TBC4 344 aa16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 CACUL1Q86Y37 369 aa16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 OR4N2Q8NGD1 307 aa16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 SERINC2Q96SA4 455 aa16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 POLE3Q9NRF9 147 aa16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 SLC27A6Q9Y2P4 619 aa16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 NOTCH4Q99466 2003 aa16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 IGLON5A6NGN9 336 aa16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 MED6O75586 246 aa16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 IGKV1D-16P01601 117 aa16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 NME2P22392 152 aa16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 CD1CP29017 333 aa16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 CSNK1EP49674 416 aaKnown RBP16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 SLC22A6Q4U2R8 563 aa16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 TMEM225Q6GV28 225 aa16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 FAHD2BQ6P2I3 314 aaPredicted RBP16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 GVQW1Q8N7I0 195 aa16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 TMEM52Q8NDY8 209 aa16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 PPP1R14AQ96A00 147 aa16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 RSPRY1Q96DX4 576 aa16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 FAHD2AQ96GK7 314 aa16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 WDR77Q9BQA1 342 aaPredicted RBP16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 SLC22A13Q9Y226 551 aa16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 DMRT1Q9Y5R6 373 aa16.76■□□□□ 0.27
ECHDC1-214ENST00000474289 B3GALT2O43825 422 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 LRP3O75074 770 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 RHOP08100 348 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 SLC35G6P0C7Q6 338 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 P2RY2P41231 377 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 MGAT2Q10469 447 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 KRBOX4Q5JUW0 171 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 OTPQ5XKR4 325 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 ADGRE4PQ86SQ3 457 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 RCBTB1Q8NDN9 531 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 KIRREL1Q96J84 757 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 FN3KRPQ9HA64 309 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 FANCMQ8IYD8 2048 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 hCG_1809904A0A1W2PP81 198 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 A0A1W2PPH5 198 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 A0A1W2PR64 198 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 A0A1W2PRV1 198 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 PRAMEF26H0Y7S4 382 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 PHYHO14832 338 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 PPIHO43447 177 aaKnown RBP16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 FBXO24O75426 580 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 NKX2-2O95096 273 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 SERPINA5P05154 406 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 CEBPBP17676 345 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 PMELP40967 661 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 CX3CR1P49238 355 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 CTXN1P60606 82 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 ELAVL3Q14576 367 aaKnown RBP16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 SGCAQ16586 387 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 HNRNPA1L2Q32P51 320 aaKnown RBP16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 AWAT2Q6E213 333 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 DBX2Q6ZNG2 339 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 RNF44Q7L0R7 432 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 ZNF550Q7Z398 422 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 RNF128Q8TEB7 428 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 THRSPQ92748 146 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 CMKLR1Q99788 373 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 MBNL1Q9NR56 388 aaKnown RBP16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 KCNG2Q9UJ96 466 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 GTF2A1LQ9UNN4 478 aa16.75■□□□□ 0.27
ECHDC1-214ENST00000474289 POM121BA6NF01 834 aa16.74■□□□□ 0.27
ECHDC1-214ENST00000474289 NPIPB9F8W1W9 429 aa16.74■□□□□ 0.27
ECHDC1-214ENST00000474289 F13BP05160 661 aa16.74■□□□□ 0.27
ECHDC1-214ENST00000474289 KLK3P07288 261 aaPredicted RBP16.74■□□□□ 0.27
ECHDC1-214ENST00000474289 SSTP61278 116 aa16.74■□□□□ 0.27
ECHDC1-214ENST00000474289 ITPRIPL2Q3MIP1 535 aa16.74■□□□□ 0.27
ECHDC1-214ENST00000474289 FJX1Q86VR8 437 aa16.74■□□□□ 0.27
ECHDC1-214ENST00000474289 ACBD4Q8NC06 268 aa16.74■□□□□ 0.27
ECHDC1-214ENST00000474289 ZNF563Q8TA94 476 aa16.74■□□□□ 0.27
ECHDC1-214ENST00000474289 C3orf49Q96BT1 292 aa16.74■□□□□ 0.27
ECHDC1-214ENST00000474289 TAAR9Q96RI9 348 aa16.74■□□□□ 0.27
ECHDC1-214ENST00000474289 PFDN5Q99471 154 aa16.74■□□□□ 0.27
ECHDC1-214ENST00000474289 GGACTQ9BVM4 153 aa16.74■□□□□ 0.27
ECHDC1-214ENST00000474289 TMPRSS5Q9H3S3 457 aa16.74■□□□□ 0.27
ECHDC1-214ENST00000474289 OR5AC2Q9NZP5 309 aa16.74■□□□□ 0.27
ECHDC1-214ENST00000474289 ARID1BQ8NFD5 2236 aaPredicted RBP16.74■□□□□ 0.27
ECHDC1-214ENST00000474289 IGKV1D-42A0A075B6H8 117 aa16.74■□□□□ 0.27
ECHDC1-214ENST00000474289 TBC1D3IA0A087WXS9 549 aa16.74■□□□□ 0.27
ECHDC1-214ENST00000474289 RAB5AP20339 215 aa16.74■□□□□ 0.27
ECHDC1-214ENST00000474289 MPZP25189 248 aa16.74■□□□□ 0.27
ECHDC1-214ENST00000474289 RPS15AP62244 130 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms