RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 OR4K13Q8NH42 304 aa16.09■□□□□ 0.17
CCDC171-206ENST00000474193 C10orf105Q8TEF2 133 aa16.09■□□□□ 0.17
CCDC171-206ENST00000474193 MS4A3Q96HJ5 214 aa16.09■□□□□ 0.17
CCDC171-206ENST00000474193 PLEKHA8Q96JA3 519 aa16.09■□□□□ 0.17
CCDC171-206ENST00000474193 SH3GL3Q99963 347 aa16.09■□□□□ 0.17
CCDC171-206ENST00000474193 MS4A5Q9H3V2 200 aa16.09■□□□□ 0.17
CCDC171-206ENST00000474193 CDH20Q9HBT6 801 aa16.09■□□□□ 0.17
CCDC171-206ENST00000474193 CCNB1IP1Q9NPC3 277 aa16.09■□□□□ 0.17
CCDC171-206ENST00000474193 C8orf4Q9NR00 106 aa16.09■□□□□ 0.17
CCDC171-206ENST00000474193 USE1Q9NZ43 259 aa16.09■□□□□ 0.17
CCDC171-206ENST00000474193 GPR160Q9UJ42 338 aa16.09■□□□□ 0.17
CCDC171-206ENST00000474193 TLN2Q9Y4G6 2542 aa16.08■□□□□ 0.17
CCDC171-206ENST00000474193 LOC390937A0A1W2PQ73 354 aa16.08■□□□□ 0.16
CCDC171-206ENST00000474193 INAFM1C9JVW0 142 aa16.08■□□□□ 0.16
CCDC171-206ENST00000474193 H7C1C5 153 aa16.08■□□□□ 0.16
CCDC171-206ENST00000474193 MITFO75030 526 aaPredicted RBP16.08■□□□□ 0.16
CCDC171-206ENST00000474193 ALPLP05186 524 aa16.08■□□□□ 0.16
CCDC171-206ENST00000474193 ZNF35P13682 527 aa16.08■□□□□ 0.16
CCDC171-206ENST00000474193 HIST1H1CP16403 213 aaKnown RBP16.08■□□□□ 0.16
CCDC171-206ENST00000474193 GRK5P34947 590 aa16.08■□□□□ 0.16
CCDC171-206ENST00000474193 EVX1P49640 407 aa16.08■□□□□ 0.16
CCDC171-206ENST00000474193 LCN6P62502 163 aa16.08■□□□□ 0.16
CCDC171-206ENST00000474193 HSF2Q03933 536 aa16.08■□□□□ 0.16
CCDC171-206ENST00000474193 SLC34A1Q06495 639 aa16.08■□□□□ 0.16
CCDC171-206ENST00000474193 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.08■□□□□ 0.16
CCDC171-206ENST00000474193 LOXL1Q08397 574 aaPredicted RBP16.08■□□□□ 0.16
CCDC171-206ENST00000474193 DNM1P34Q6PK57 102 aa16.08■□□□□ 0.16
CCDC171-206ENST00000474193 NSMAFQ92636 917 aa16.08■□□□□ 0.16
CCDC171-206ENST00000474193 SORCS2Q96PQ0 1159 aa16.08■□□□□ 0.16
CCDC171-206ENST00000474193 DOK1Q99704 481 aa16.08■□□□□ 0.16
CCDC171-206ENST00000474193 VCXQ9H320 206 aa16.08■□□□□ 0.16
CCDC171-206ENST00000474193 RIBC2Q9H4K1 309 aa16.08■□□□□ 0.16
CCDC171-206ENST00000474193 SIAEQ9HAT2 523 aa16.08■□□□□ 0.16
CCDC171-206ENST00000474193 YAE1D1Q9NRH1 226 aa16.08■□□□□ 0.16
CCDC171-206ENST00000474193 RRP15Q9Y3B9 282 aaKnown RBP16.08■□□□□ 0.16
CCDC171-206ENST00000474193 ARFGEF3Q5TH69 2177 aa16.08■□□□□ 0.16
CCDC171-206ENST00000474193 CD5LO43866 347 aa16.07■□□□□ 0.16
CCDC171-206ENST00000474193 PATE4P0C8F1 98 aa16.07■□□□□ 0.16
CCDC171-206ENST00000474193 ZNF3P17036 446 aa16.07■□□□□ 0.16
CCDC171-206ENST00000474193 PAICSP22234 425 aaKnown RBP16.07■□□□□ 0.16
CCDC171-206ENST00000474193 USF1P22415 310 aaPredicted RBP16.07■□□□□ 0.16
CCDC171-206ENST00000474193 CRABP1P29762 137 aa16.07■□□□□ 0.16
CCDC171-206ENST00000474193 PTGES3Q15185 160 aaKnown RBP16.07■□□□□ 0.16
CCDC171-206ENST00000474193 SGCAQ16586 387 aa16.07■□□□□ 0.16
CCDC171-206ENST00000474193 LRRC36Q1X8D7 754 aa16.07■□□□□ 0.16
CCDC171-206ENST00000474193 TBC1D28Q2M2D7 210 aa16.07■□□□□ 0.16
CCDC171-206ENST00000474193 C10orf128Q5T292 105 aa16.07■□□□□ 0.16
CCDC171-206ENST00000474193 UNQ6126/PRO20091Q6UXV3 157 aa16.07■□□□□ 0.16
CCDC171-206ENST00000474193 LRRC18Q8N456 261 aa16.07■□□□□ 0.16
CCDC171-206ENST00000474193 IQCF1Q8N6M8 205 aa16.07■□□□□ 0.16
CCDC171-206ENST00000474193 SLC30A7Q8NEW0 376 aa16.07■□□□□ 0.16
CCDC171-206ENST00000474193 OR4Q3Q8NH05 313 aa16.07■□□□□ 0.16
CCDC171-206ENST00000474193 SNX18Q96RF0 628 aa16.07■□□□□ 0.16
CCDC171-206ENST00000474193 NMNAT3Q96T66 252 aa16.07■□□□□ 0.16
CCDC171-206ENST00000474193 RERGLQ9H628 205 aa16.07■□□□□ 0.16
CCDC171-206ENST00000474193 RNPEPL1Q9HAU8 725 aa16.07■□□□□ 0.16
CCDC171-206ENST00000474193 ZNF224Q9NZL3 707 aa16.07■□□□□ 0.16
CCDC171-206ENST00000474193 VSX1Q9NZR4 365 aaPredicted RBP16.07■□□□□ 0.16
CCDC171-206ENST00000474193 TMEFF2Q9UIK5 374 aaPredicted RBP16.07■□□□□ 0.16
CCDC171-206ENST00000474193 SYNGR3O43761 229 aa16.06■□□□□ 0.16
CCDC171-206ENST00000474193 SLC16A7O60669 478 aa16.06■□□□□ 0.16
CCDC171-206ENST00000474193 APLNRP35414 380 aa16.06■□□□□ 0.16
CCDC171-206ENST00000474193 CDKN2AP42771 156 aaKnown RBP16.06■□□□□ 0.16
CCDC171-206ENST00000474193 RAD52P43351 418 aa16.06■□□□□ 0.16
CCDC171-206ENST00000474193 MRPS34P82930 218 aaKnown RBP16.06■□□□□ 0.16
CCDC171-206ENST00000474193 CDK5Q00535 292 aa16.06■□□□□ 0.16
CCDC171-206ENST00000474193 ALDH16A1Q8IZ83 802 aa16.06■□□□□ 0.16
CCDC171-206ENST00000474193 SDR9C7Q8NEX9 313 aa16.06■□□□□ 0.16
CCDC171-206ENST00000474193 MRPL24Q96A35 216 aaKnown RBP16.06■□□□□ 0.16
CCDC171-206ENST00000474193 ZNF75AQ96N20 296 aa16.06■□□□□ 0.16
CCDC171-206ENST00000474193 SYT4Q9H2B2 425 aa16.06■□□□□ 0.16
CCDC171-206ENST00000474193 SLC25A19Q9HC21 320 aa16.06■□□□□ 0.16
CCDC171-206ENST00000474193 NSD1Q96L73 2696 aaPredicted RBP16.05■□□□□ 0.16
CCDC171-206ENST00000474193 A8MV72 311 aaPredicted RBP16.05■□□□□ 0.16
CCDC171-206ENST00000474193 M0R233 179 aa16.05■□□□□ 0.16
CCDC171-206ENST00000474193 KHDRBS3O75525 346 aaKnown RBP16.05■□□□□ 0.16
CCDC171-206ENST00000474193 LY6HO94772 140 aa16.05■□□□□ 0.16
CCDC171-206ENST00000474193 SLC2A10O95528 541 aa16.05■□□□□ 0.16
CCDC171-206ENST00000474193 ADRA2AP08913 450 aa16.05■□□□□ 0.16
CCDC171-206ENST00000474193 CENPAP49450 140 aa16.05■□□□□ 0.16
CCDC171-206ENST00000474193 ZNF133P52736 654 aaPredicted RBP16.05■□□□□ 0.16
CCDC171-206ENST00000474193 FMODQ06828 376 aa16.05■□□□□ 0.16
CCDC171-206ENST00000474193 SNAPC1Q16533 368 aa16.05■□□□□ 0.16
CCDC171-206ENST00000474193 MOGQ16653 247 aa16.05■□□□□ 0.16
CCDC171-206ENST00000474193 TMEM236Q5W0B7 351 aa16.05■□□□□ 0.16
CCDC171-206ENST00000474193 LPCAT4Q643R3 524 aa16.05■□□□□ 0.16
CCDC171-206ENST00000474193 CYB5R2Q6BCY4 276 aa16.05■□□□□ 0.16
CCDC171-206ENST00000474193 RGS7BPQ6MZT1 257 aaPredicted RBP16.05■□□□□ 0.16
CCDC171-206ENST00000474193 PTCHD4Q6ZW05 846 aa16.05■□□□□ 0.16
CCDC171-206ENST00000474193 GALNT4Q8N4A0 578 aa16.05■□□□□ 0.16
CCDC171-206ENST00000474193 PACRGLQ8N7B6 248 aa16.05■□□□□ 0.16
CCDC171-206ENST00000474193 C11orf40Q8WZ69 217 aa16.05■□□□□ 0.16
CCDC171-206ENST00000474193 OTULINQ96BN8 352 aa16.05■□□□□ 0.16
CCDC171-206ENST00000474193 GABARAPL3Q9BY60 117 aa16.05■□□□□ 0.16
CCDC171-206ENST00000474193 SRA1Q9HD15 236 aaKnown RBP16.05■□□□□ 0.16
CCDC171-206ENST00000474193 RPRD1BQ9NQG5 326 aaKnown RBP16.05■□□□□ 0.16
CCDC171-206ENST00000474193 CMC2Q9NRP2 79 aa16.05■□□□□ 0.16
CCDC171-206ENST00000474193 TVP23BQ9NYZ1 205 aa16.05■□□□□ 0.16
CCDC171-206ENST00000474193 DUSP13Q9UII6 198 aa16.05■□□□□ 0.16
CCDC171-206ENST00000474193 A0A1W2PPL8 197 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms