RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 CRLF2Q9HC73 371 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 CD209Q9NNX6 404 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 ADAP2Q9NPF8 381 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 INPP5EQ9NRR6 644 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 C20orf96Q9NUD7 363 aaPredicted RBP3.15□□□□□ -1.91
BRCA1-212ENST00000473961 ARMC1Q9NVT9 282 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 AIG1Q9NVV5 245 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 NKIRAS1Q9NYS0 192 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 UXTQ9UBK9 157 aaPredicted RBP3.15□□□□□ -1.91
BRCA1-212ENST00000473961 MTRF1LQ9UGC7 380 aaKnown RBP3.15□□□□□ -1.91
BRCA1-212ENST00000473961 GNPTGQ9UJJ9 305 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 TFR2Q9UP52 801 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 DIP2AQ14689 1571 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 LAMA4Q16363 1823 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 TET3O43151 1660 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 CRB1P82279 1406 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 TMEM120BA0PK00 339 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 FAM168BA1KXE4 195 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 OR2AG2A6NM03 316 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 E7EWF7 191 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 M0QX08 132 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 KPNA4O00629 521 aaPredicted RBP3.14□□□□□ -1.91
BRCA1-212ENST00000473961 PPP1R2P9O14990 202 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 AQP9O43315 295 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 SPAG7O75391 227 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 CRLF1O75462 422 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 TNFAIP8O95379 198 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 C1orf105O95561 183 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 ERCC1P07992 297 aaPredicted RBP3.14□□□□□ -1.91
BRCA1-212ENST00000473961 P0C879 139 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 ZNF43P17038 809 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 TAC1P20366 129 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 GATA2P23769 480 aaPredicted RBP3.14□□□□□ -1.91
BRCA1-212ENST00000473961 IL32P24001 234 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 SLC1A1P43005 524 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 RGRP47804 291 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 CX3CR1P49238 355 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 TUFMP49411 452 aaKnown RBP3.14□□□□□ -1.91
BRCA1-212ENST00000473961 SSR4P51571 173 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 YWHAGP61981 247 aaKnown RBP eCLIP3.14□□□□□ -1.91
BRCA1-212ENST00000473961 ORC2Q13416 577 aaPredicted RBP3.14□□□□□ -1.91
BRCA1-212ENST00000473961 C16orf72Q14CZ0 275 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 NSDHLQ15738 373 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 KCNJ8Q15842 424 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 DUPD1Q68J44 220 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 UGT2A3Q6UWM9 527 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 C4orf22Q6V702 233 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 TRMT10CQ7L0Y3 403 aaKnown RBP3.14□□□□□ -1.91
BRCA1-212ENST00000473961 FAM220AQ7Z4H9 259 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 SLC51BQ86UW2 128 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 LRRC6Q86X45 466 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 EID2Q8N6I1 236 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 NKAPP1Q8N9T2 125 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 OR6C4Q8NGE1 309 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 LILRB4Q8NHJ6 448 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 ESR2Q92731 530 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 CDKL2Q92772 493 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 MARC2Q969Z3 335 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 CCDC127Q96BQ5 260 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 MS4A4EQ96PG1 132 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 PYGO2Q9BRQ0 406 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 FAIM2Q9BWQ8 316 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 SPZ1Q9BXG8 430 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 HES7Q9BYE0 225 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 NEUROG2Q9H2A3 272 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 SIAEQ9HAT2 523 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 LY9Q9HBG7 655 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 CHRAC1Q9NRG0 131 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 RSL24D1Q9UHA3 163 aaKnown RBP3.14□□□□□ -1.91
BRCA1-212ENST00000473961 ATPIF1Q9UII2 106 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 DNAJC12Q9UKB3 198 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 MOKQ9UQ07 419 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 WNK3Q9BYP7 1800 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 NEXMIFQ5QGS0 1516 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 TULP4Q9NRJ4 1543 aa3.14□□□□□ -1.91
BRCA1-212ENST00000473961 MYH10P35580 1976 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 IGKV1D-8A0A087WSZ0 117 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 A0A0B4J2A0 478 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 GOLGA8QA0A0J9YX86 632 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 KLF18A0A0U1RQI7 1052 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 EPOPA6NHQ4 379 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 RSPH10B2B2RC85 870 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 GOLGA8RI6L899 631 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 RAB29O14966 203 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 RNF113AO15541 343 aaKnown RBP3.13□□□□□ -1.91
BRCA1-212ENST00000473961 EDF1O60869 148 aaKnown RBP3.13□□□□□ -1.91
BRCA1-212ENST00000473961 EEDO75530 441 aaKnown RBP3.13□□□□□ -1.91
BRCA1-212ENST00000473961 CTAG2O75638 210 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 SULT1C4O75897 302 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 MMP23AO75900 390 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 OR2F2O95006 317 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 KLHL2O95198 593 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 CRYZL1O95825 349 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 IGHV2-5P01817 119 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 ALDOBP05062 364 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 ANXA5P08758 320 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 RSPH10BP0C881 870 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 OR8G3PP0DMU2 310 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 MYL2P10916 166 aa3.13□□□□□ -1.91
BRCA1-212ENST00000473961 CTRB1P17538 263 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms