RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 RER1O15258 196 aa10.74□□□□□ -0.69
DDX56-209ENST00000473924 TMCC2O75069 709 aa10.74□□□□□ -0.69
DDX56-209ENST00000473924 ATE1O95260 518 aa10.74□□□□□ -0.69
DDX56-209ENST00000473924 CD53P19397 219 aa10.74□□□□□ -0.69
DDX56-209ENST00000473924 APOBEC3AP31941 199 aaPredicted RBP10.74□□□□□ -0.69
DDX56-209ENST00000473924 TTKP33981 857 aa10.74□□□□□ -0.69
DDX56-209ENST00000473924 POLR2IP36954 125 aaKnown RBP10.74□□□□□ -0.69
DDX56-209ENST00000473924 HTR5AP47898 357 aa10.74□□□□□ -0.69
DDX56-209ENST00000473924 ELF3P78545 371 aaPredicted RBP10.74□□□□□ -0.69
DDX56-209ENST00000473924 HGFACQ04756 655 aa10.74□□□□□ -0.69
DDX56-209ENST00000473924 TRIP10Q15642 601 aa10.74□□□□□ -0.69
DDX56-209ENST00000473924 ZIK1Q3SY52 487 aaPredicted RBP10.74□□□□□ -0.69
DDX56-209ENST00000473924 ZNF544Q6NX49 715 aa10.74□□□□□ -0.69
DDX56-209ENST00000473924 TMEM154Q6P9G4 183 aa10.74□□□□□ -0.69
DDX56-209ENST00000473924 CORO6Q6QEF8 472 aa10.74□□□□□ -0.69
DDX56-209ENST00000473924 LINC00346Q8IVM7 164 aa10.74□□□□□ -0.69
DDX56-209ENST00000473924 MUC15Q8N387 334 aa10.74□□□□□ -0.69
DDX56-209ENST00000473924 NUP37Q8NFH4 326 aa10.74□□□□□ -0.69
DDX56-209ENST00000473924 ZNRF4Q8WWF5 429 aa10.74□□□□□ -0.69
DDX56-209ENST00000473924 PTP4A1Q93096 173 aa10.74□□□□□ -0.69
DDX56-209ENST00000473924 HCAR1Q9BXC0 346 aa10.74□□□□□ -0.69
DDX56-209ENST00000473924 GRIP2Q9C0E4 1043 aa10.74□□□□□ -0.69
DDX56-209ENST00000473924 OR51B6Q9H340 312 aa10.74□□□□□ -0.69
DDX56-209ENST00000473924 HINT3Q9NQE9 182 aaKnown RBP10.74□□□□□ -0.69
DDX56-209ENST00000473924 MRPL22Q9NWU5 206 aaKnown RBP10.74□□□□□ -0.69
DDX56-209ENST00000473924 H2AFY2Q9P0M6 372 aaPredicted RBP10.74□□□□□ -0.69
DDX56-209ENST00000473924 EIF3KQ9UBQ5 218 aaKnown RBP10.74□□□□□ -0.69
DDX56-209ENST00000473924 KCNG2Q9UJ96 466 aa10.74□□□□□ -0.69
DDX56-209ENST00000473924 ITGB1BP2Q9UKP3 347 aa10.74□□□□□ -0.69
DDX56-209ENST00000473924 NDRG4Q9ULP0 352 aaKnown RBP10.74□□□□□ -0.69
DDX56-209ENST00000473924 LHFPL6Q9Y693 200 aa10.74□□□□□ -0.69
DDX56-209ENST00000473924 NOTCH2Q04721 2471 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 PRODHO43272 600 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 TLX2O43763 284 aaPredicted RBP10.73□□□□□ -0.69
DDX56-209ENST00000473924 PRKYO43930 277 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 GLCEO94923 617 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 SNAP29O95721 258 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 SOD3P08294 240 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 SPARCP09486 303 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 DANCRP0C864 163 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 FAM157BP0CG42 384 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 COX5BP10606 129 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 NR4A1P22736 598 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 GSTT1P30711 240 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 RAD52P43351 418 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 ENTPD1P49961 510 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 RPS23P62266 143 aaKnown RBP10.73□□□□□ -0.69
DDX56-209ENST00000473924 RAB35Q15286 201 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 LRRC36Q1X8D7 754 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 C12orf73Q69YU5 71 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 SLC18B1Q6NT16 456 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 ARL9Q6T311 187 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 LYPD4Q6UWN0 246 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 UNQ6126/PRO20091Q6UXV3 157 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 ZNF771Q7L3S4 317 aaPredicted RBP10.73□□□□□ -0.69
DDX56-209ENST00000473924 VASH1Q7L8A9 365 aaPredicted RBP10.73□□□□□ -0.69
DDX56-209ENST00000473924 PAQR4Q8N4S7 273 aaPredicted RBP10.73□□□□□ -0.69
DDX56-209ENST00000473924 TCEANCQ8N8B7 351 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 ZNF511Q8NB15 262 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 POM121L2Q96KW2 1035 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 IL4I1Q96RQ9 567 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 PITX2Q99697 317 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 SLC29A1Q99808 456 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 CXorf56Q9H5V9 222 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 DCLRE1BQ9H816 532 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 WDR76Q9H967 626 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 CYB5R1Q9UHQ9 305 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 COMMD3-BMI1R4GMX3 469 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 RAI1Q7Z5J4 1906 aaPredicted RBP10.73□□□□□ -0.69
DDX56-209ENST00000473924 LRBAP50851 2863 aa10.73□□□□□ -0.69
DDX56-209ENST00000473924 ANKRD17O75179 2603 aaKnown RBP10.72□□□□□ -0.69
DDX56-209ENST00000473924 ROS1P08922 2347 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 LOC100509620A0A075B734 347 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 M0R129 80 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 ZNF593O00488 134 aaPredicted RBP10.72□□□□□ -0.69
DDX56-209ENST00000473924 SMPD2O60906 423 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 LCKP06239 509 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 OR4A8P0C604 315 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 BMP4P12644 408 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 THBS4P35443 961 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 GGT2P36268 569 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 SERPINF1P36955 418 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 RPS27P42677 84 aaKnown RBP10.72□□□□□ -0.69
DDX56-209ENST00000473924 CDC42P60953 191 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 NKX6-1P78426 367 aaPredicted RBP10.72□□□□□ -0.69
DDX56-209ENST00000473924 APOFQ13790 326 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 ADIPOQQ15848 244 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 DEFB113Q30KQ7 82 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 CCDC92Q53HC0 331 aaPredicted RBP10.72□□□□□ -0.69
DDX56-209ENST00000473924 SLC35D3Q5M8T2 416 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 ELFN2Q5R3F8 820 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 ERI1Q8IV48 349 aaKnown RBP10.72□□□□□ -0.69
DDX56-209ENST00000473924 BBS1Q8NFJ9 593 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 OR6N2Q8NGY6 317 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 OR1F12Q8NHA8 337 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 TMEM163Q8TC26 289 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 ZMYND19Q96E35 227 aaPredicted RBP10.72□□□□□ -0.69
DDX56-209ENST00000473924 INTS14Q96SY0 518 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 HDHD2Q9H0R4 259 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 TOR3AQ9H497 397 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms