RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 ARHGDIAP52565 204 aa12.98□□□□□ -0.33
VTI1A-203ENST00000472892 PSME3P61289 254 aa12.98□□□□□ -0.33
VTI1A-203ENST00000472892 FAHD2BQ6P2I3 314 aaPredicted RBP12.98□□□□□ -0.33
VTI1A-203ENST00000472892 ARL9Q6T311 187 aa12.98□□□□□ -0.33
VTI1A-203ENST00000472892 RAB1CQ92928 201 aa12.98□□□□□ -0.33
VTI1A-203ENST00000472892 FAHD2AQ96GK7 314 aa12.98□□□□□ -0.33
VTI1A-203ENST00000472892 TIMD4Q96H15 378 aa12.98□□□□□ -0.33
VTI1A-203ENST00000472892 DIRC2Q96SL1 478 aa12.98□□□□□ -0.33
VTI1A-203ENST00000472892 EGLN1Q9GZT9 426 aa12.98□□□□□ -0.33
VTI1A-203ENST00000472892 MYLK2Q9H1R3 596 aa12.98□□□□□ -0.33
VTI1A-203ENST00000472892 METTL17Q9H7H0 456 aaPredicted RBP12.98□□□□□ -0.33
VTI1A-203ENST00000472892 EMC7Q9NPA0 242 aa12.98□□□□□ -0.33
VTI1A-203ENST00000472892 G6PC2Q9NQR9 355 aa12.98□□□□□ -0.33
VTI1A-203ENST00000472892 TUBG2Q9NRH3 451 aa12.98□□□□□ -0.33
VTI1A-203ENST00000472892 TBCCD1Q9NVR7 557 aa12.98□□□□□ -0.33
VTI1A-203ENST00000472892 NDUFAF4Q9P032 175 aa12.98□□□□□ -0.33
VTI1A-203ENST00000472892 RPS6KA6Q9UK32 745 aa12.98□□□□□ -0.33
VTI1A-203ENST00000472892 ZDHHC8Q9ULC8 765 aa12.98□□□□□ -0.33
VTI1A-203ENST00000472892 TEX13CA0A0J9YWL9 993 aa12.97□□□□□ -0.33
VTI1A-203ENST00000472892 PLPP2O43688 288 aa12.97□□□□□ -0.33
VTI1A-203ENST00000472892 NDUFB2O95178 105 aa12.97□□□□□ -0.33
VTI1A-203ENST00000472892 H1F0P07305 194 aaKnown RBP12.97□□□□□ -0.33
VTI1A-203ENST00000472892 CD55P08174 381 aa12.97□□□□□ -0.33
VTI1A-203ENST00000472892 CTLA4P16410 223 aa12.97□□□□□ -0.33
VTI1A-203ENST00000472892 ITGA2P17301 1181 aa12.97□□□□□ -0.33
VTI1A-203ENST00000472892 RHCEP18577 417 aa12.97□□□□□ -0.33
VTI1A-203ENST00000472892 LIMS1P48059 325 aa12.97□□□□□ -0.33
VTI1A-203ENST00000472892 SCRN3Q0VDG4 424 aa12.97□□□□□ -0.33
VTI1A-203ENST00000472892 PSG7Q13046 419 aa12.97□□□□□ -0.33
VTI1A-203ENST00000472892 GPR139Q6DWJ6 353 aa12.97□□□□□ -0.33
VTI1A-203ENST00000472892 GLYATQ6IB77 296 aa12.97□□□□□ -0.33
VTI1A-203ENST00000472892 CCL17Q92583 94 aa12.97□□□□□ -0.33
VTI1A-203ENST00000472892 RAB39BQ96DA2 213 aa12.97□□□□□ -0.33
VTI1A-203ENST00000472892 CMTM5Q96DZ9 223 aa12.97□□□□□ -0.33
VTI1A-203ENST00000472892 FAM46AQ96IP4 442 aaKnown RBP12.97□□□□□ -0.33
VTI1A-203ENST00000472892 C7orf34Q96L11 122 aa12.97□□□□□ -0.33
VTI1A-203ENST00000472892 ZNF570Q96NI8 536 aa12.97□□□□□ -0.33
VTI1A-203ENST00000472892 GPX7Q96SL4 187 aaPredicted RBP12.97□□□□□ -0.33
VTI1A-203ENST00000472892 NDEL1Q9GZM8 345 aa12.97□□□□□ -0.33
VTI1A-203ENST00000472892 NRIP3Q9NQ35 241 aa12.97□□□□□ -0.33
VTI1A-203ENST00000472892 DCAF13Q9NV06 445 aaKnown RBP12.97□□□□□ -0.33
VTI1A-203ENST00000472892 SIGLEC7Q9Y286 467 aa12.97□□□□□ -0.33
VTI1A-203ENST00000472892 FAM32AQ9Y421 112 aaKnown RBP12.97□□□□□ -0.33
VTI1A-203ENST00000472892 A0A0A6YYJ9 748 aa12.96□□□□□ -0.33
VTI1A-203ENST00000472892 MPZL1O95297 269 aa12.96□□□□□ -0.33
VTI1A-203ENST00000472892 PNPP00491 289 aa12.96□□□□□ -0.33
VTI1A-203ENST00000472892 IGHV2-5P01817 119 aa12.96□□□□□ -0.33
VTI1A-203ENST00000472892 OMPP47874 163 aa12.96□□□□□ -0.33
VTI1A-203ENST00000472892 SLC3A1Q07837 685 aa12.96□□□□□ -0.33
VTI1A-203ENST00000472892 CDK5R2Q13319 367 aa12.96□□□□□ -0.33
VTI1A-203ENST00000472892 ZMAT1Q5H9K5 638 aa12.96□□□□□ -0.33
VTI1A-203ENST00000472892 MTX3Q5HYI7 312 aa12.96□□□□□ -0.33
VTI1A-203ENST00000472892 C1orf229Q6ZS94 237 aaPredicted RBP12.96□□□□□ -0.33
VTI1A-203ENST00000472892 ZER1Q7Z7L7 766 aa12.96□□□□□ -0.33
VTI1A-203ENST00000472892 MSL2Q9HCI7 577 aa12.96□□□□□ -0.33
VTI1A-203ENST00000472892 VSX1Q9NZR4 365 aaPredicted RBP12.96□□□□□ -0.33
VTI1A-203ENST00000472892 EGFL7Q9UHF1 273 aa12.96□□□□□ -0.33
VTI1A-203ENST00000472892 ANK2Q01484 3957 aa12.95□□□□□ -0.34
VTI1A-203ENST00000472892 SGCEO43556 437 aa12.95□□□□□ -0.34
VTI1A-203ENST00000472892 SLC16A7O60669 478 aa12.95□□□□□ -0.34
VTI1A-203ENST00000472892 KHDRBS3O75525 346 aaKnown RBP12.95□□□□□ -0.34
VTI1A-203ENST00000472892 ABHD16AO95870 558 aa12.95□□□□□ -0.34
VTI1A-203ENST00000472892 AVPP01185 164 aa12.95□□□□□ -0.34
VTI1A-203ENST00000472892 PRDX6P30041 224 aa12.95□□□□□ -0.34
VTI1A-203ENST00000472892 SDHAP31040 664 aa12.95□□□□□ -0.34
VTI1A-203ENST00000472892 FXYD6P3P58550 94 aa12.95□□□□□ -0.34
VTI1A-203ENST00000472892 LSM6P62312 80 aaKnown RBP12.95□□□□□ -0.34
VTI1A-203ENST00000472892 SCGB2A2Q13296 93 aa12.95□□□□□ -0.34
VTI1A-203ENST00000472892 AQP6Q13520 282 aa12.95□□□□□ -0.34
VTI1A-203ENST00000472892 KRR1Q13601 381 aaKnown RBP12.95□□□□□ -0.34
VTI1A-203ENST00000472892 SEC23BQ15437 767 aa12.95□□□□□ -0.34
VTI1A-203ENST00000472892 SPRNQ5BIV9 151 aa12.95□□□□□ -0.34
VTI1A-203ENST00000472892 THSD4Q6ZMP0 1018 aa12.95□□□□□ -0.34
VTI1A-203ENST00000472892 DPY19L2P2Q6ZN68 376 aa12.95□□□□□ -0.34
VTI1A-203ENST00000472892 VASH1Q7L8A9 365 aaPredicted RBP12.95□□□□□ -0.34
VTI1A-203ENST00000472892 GLB1L2Q8IW92 636 aa12.95□□□□□ -0.34
VTI1A-203ENST00000472892 TEX29Q8N6K0 151 aa12.95□□□□□ -0.34
VTI1A-203ENST00000472892 NPEPL1Q8NDH3 523 aa12.95□□□□□ -0.34
VTI1A-203ENST00000472892 RASD2Q96D21 266 aa12.95□□□□□ -0.34
VTI1A-203ENST00000472892 DHRS1Q96LJ7 313 aa12.95□□□□□ -0.34
VTI1A-203ENST00000472892 ELAC2Q9BQ52 826 aaKnown RBP12.95□□□□□ -0.34
VTI1A-203ENST00000472892 FUZQ9BT04 418 aa12.95□□□□□ -0.34
VTI1A-203ENST00000472892 SYT4Q9H2B2 425 aa12.95□□□□□ -0.34
VTI1A-203ENST00000472892 POFUT1Q9H488 388 aa12.95□□□□□ -0.34
VTI1A-203ENST00000472892 GORASP2Q9H8Y8 452 aa12.95□□□□□ -0.34
VTI1A-203ENST00000472892 SPAG4Q9NPE6 437 aa12.95□□□□□ -0.34
VTI1A-203ENST00000472892 SAMD4AQ9UPU9 718 aaKnown RBP12.95□□□□□ -0.34
VTI1A-203ENST00000472892 COA3Q9Y2R0 106 aaPredicted RBP12.95□□□□□ -0.34
VTI1A-203ENST00000472892 TRBV4-1A0A0J9YWV2 114 aa12.94□□□□□ -0.34
VTI1A-203ENST00000472892 DOK2O60496 412 aa12.94□□□□□ -0.34
VTI1A-203ENST00000472892 VENTXO95231 258 aa12.94□□□□□ -0.34
VTI1A-203ENST00000472892 TXNDC12O95881 172 aa12.94□□□□□ -0.34
VTI1A-203ENST00000472892 GSTM3P21266 225 aa12.94□□□□□ -0.34
VTI1A-203ENST00000472892 KITLGP21583 273 aa12.94□□□□□ -0.34
VTI1A-203ENST00000472892 HTR5AP47898 357 aa12.94□□□□□ -0.34
VTI1A-203ENST00000472892 KCNMB1Q16558 191 aa12.94□□□□□ -0.34
VTI1A-203ENST00000472892 SHQ1Q6PI26 577 aaKnown RBP12.94□□□□□ -0.34
VTI1A-203ENST00000472892 ADCK1Q86TW2 530 aa12.94□□□□□ -0.34
VTI1A-203ENST00000472892 FAM86B1Q8N7N1 296 aa12.94□□□□□ -0.34
VTI1A-203ENST00000472892 ZFAND2BQ8WV99 257 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms