RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 Q6ZNX1 250 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 SKA3Q8IX90 412 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 MINDY2Q8NBR6 621 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 PFN4Q8NHR9 129 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 TMEM255BQ8WV15 326 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 S100ZQ8WXG8 99 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 MCHR2Q969V1 340 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 MS4A3Q96HJ5 214 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 PRRC1Q96M27 445 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 FOXN4Q96NZ1 517 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 GABARAPL3Q9BY60 117 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 MS4A5Q9H3V2 200 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 REEP1Q9H902 201 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 SMURF2Q9HAU4 748 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 DYNLRB1Q9NP97 96 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 INIPQ9NRY2 104 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 LPAR3Q9UBY5 353 aa11.64□□□□□ -0.55
HMGN1-211ENST00000471260 SYNGR3O43761 229 aa11.63□□□□□ -0.55
HMGN1-211ENST00000471260 PFDN1O60925 122 aa11.63□□□□□ -0.55
HMGN1-211ENST00000471260 F13BP05160 661 aa11.63□□□□□ -0.55
HMGN1-211ENST00000471260 DAOP14920 347 aa11.63□□□□□ -0.55
HMGN1-211ENST00000471260 TNFRSF1BP20333 461 aa11.63□□□□□ -0.55
HMGN1-211ENST00000471260 PCMT1P22061 227 aa11.63□□□□□ -0.55
HMGN1-211ENST00000471260 SERPINB10P48595 397 aa11.63□□□□□ -0.55
HMGN1-211ENST00000471260 ENTPD1P49961 510 aa11.63□□□□□ -0.55
HMGN1-211ENST00000471260 ANKDD1AQ495B1 522 aa11.63□□□□□ -0.55
HMGN1-211ENST00000471260 TMEM53Q6P2H8 277 aa11.63□□□□□ -0.55
HMGN1-211ENST00000471260 ZNF584Q8IVC4 421 aa11.63□□□□□ -0.55
HMGN1-211ENST00000471260 PARP8Q8N3A8 854 aa11.63□□□□□ -0.55
HMGN1-211ENST00000471260 NOXO1Q8NFA2 376 aa11.63□□□□□ -0.55
HMGN1-211ENST00000471260 ASB10Q8WXI3 467 aa11.63□□□□□ -0.55
HMGN1-211ENST00000471260 TPD52L3Q96J77 140 aa11.63□□□□□ -0.55
HMGN1-211ENST00000471260 ZNF347Q96SE7 839 aa11.63□□□□□ -0.55
HMGN1-211ENST00000471260 KCNK17Q96T54 332 aa11.63□□□□□ -0.55
HMGN1-211ENST00000471260 DCUN1D5Q9BTE7 237 aa11.63□□□□□ -0.55
HMGN1-211ENST00000471260 DUSP21Q9H596 190 aa11.63□□□□□ -0.55
HMGN1-211ENST00000471260 KIF17Q9P2E2 1029 aa11.63□□□□□ -0.55
HMGN1-211ENST00000471260 NDRG4Q9ULP0 352 aaKnown RBP11.63□□□□□ -0.55
HMGN1-211ENST00000471260 A4GNTQ9UNA3 340 aa11.63□□□□□ -0.55
HMGN1-211ENST00000471260 HIF3AQ9Y2N7 669 aa11.63□□□□□ -0.55
HMGN1-211ENST00000471260 ANK3Q12955 4377 aaKnown RBP11.62□□□□□ -0.55
HMGN1-211ENST00000471260 M0R233 179 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 ZNF682O95780 498 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 HTR1AP08908 422 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 FAM157CP0CG43 387 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 APEHP13798 732 aaKnown RBP11.62□□□□□ -0.55
HMGN1-211ENST00000471260 AQP2P41181 271 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 YAP1P46937 504 aaKnown RBP11.62□□□□□ -0.55
HMGN1-211ENST00000471260 SLC35A2P78381 396 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 CDK5R2Q13319 367 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 GGTLC2Q14390 218 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 ZNF846Q147U1 533 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 CARTPTQ16568 116 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 IQCCQ4KMZ1 466 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 FGD3Q5JSP0 725 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 C10orf128Q5T292 105 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 ARMC4Q5T2S8 1044 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 SLC16A14Q7RTX9 510 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 PRSS48Q7RTY5 328 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 CDK20Q8IZL9 346 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 RNF113BQ8IZP6 322 aaKnown RBP11.62□□□□□ -0.55
HMGN1-211ENST00000471260 OR4K5Q8NGD3 323 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 OR1J2Q8NGS2 313 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 UBASH3BQ8TF42 649 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 HSH2DQ96JZ2 352 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 MRPL37Q9BZE1 423 aaKnown RBP11.62□□□□□ -0.55
HMGN1-211ENST00000471260 BPESC1Q9GZL8 116 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 KCNN2Q9H2S1 579 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 TXNIPQ9H3M7 391 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 RNF121Q9H920 327 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 HMG20AQ9NP66 347 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 KRT84Q9NSB2 600 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 C20orf141Q9NUB4 165 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 RTTNQ86VV8 2226 aa11.62□□□□□ -0.55
HMGN1-211ENST00000471260 ARRDC5A6NEK1 342 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 LMX1BO60663 402 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 IFNW1P05000 195 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 ADRA2AP08913 450 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 TACSTD2P09758 323 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 ITGA2P17301 1181 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 POLR2IP36954 125 aaKnown RBP11.61□□□□□ -0.55
HMGN1-211ENST00000471260 SELENOVP59797 346 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 MRPS34P82930 218 aaKnown RBP11.61□□□□□ -0.55
HMGN1-211ENST00000471260 IL5RAQ01344 420 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 PLP2Q04941 152 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 ALG10Q5BKT4 473 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 SYT6Q5T7P8 510 aaPredicted RBP11.61□□□□□ -0.55
HMGN1-211ENST00000471260 LAIR2Q6ISS4 152 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 FAM166AQ6J272 317 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 TMEM179BQ7Z7N9 219 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 ZNF554Q86TJ5 538 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 SLC30A7Q8NEW0 376 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 FGFBP3Q8TAT2 258 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 CHPT1Q8WUD6 406 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 GEMIN6Q8WXD5 167 aaKnown RBP11.61□□□□□ -0.55
HMGN1-211ENST00000471260 RORBQ92753 470 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 HPS1Q92902 700 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 BPIFA2Q96DR5 249 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 PLEKHA8Q96JA3 519 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 MDFIQ99750 246 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms