RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 MS4A7Q9GZW8 240 aaPredicted RBP11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 POLR2J3Q9H1A7 115 aaKnown RBP11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 UNKLQ9H9P5 680 aaKnown RBP11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 PATZ1Q9HBE1 687 aaKnown RBP11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 MSL2Q9HCI7 577 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 TMEM106BQ9NUM4 274 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 CMTM6Q9NX76 183 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 ZNF69Q9UC07 566 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 BAG5Q9UL15 447 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 UGT2A1Q9Y4X1 527 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 TIMM10BQ9Y5J6 103 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 TRRAPQ9Y4A5 3859 aa11.72□□□□□ -0.53
SEMA3F-208ENST00000470737 NPIPB13A6NJU9 1138 aa11.71□□□□□ -0.53
SEMA3F-208ENST00000470737 NPIPB4C9JG80 1138 aa11.71□□□□□ -0.53
SEMA3F-208ENST00000470737 IGF2P01344 180 aa11.71□□□□□ -0.53
SEMA3F-208ENST00000470737 IGHV2-70P01814 119 aa11.71□□□□□ -0.53
SEMA3F-208ENST00000470737 CST2P09228 141 aa11.71□□□□□ -0.53
SEMA3F-208ENST00000470737 LAP3P28838 519 aa11.71□□□□□ -0.53
SEMA3F-208ENST00000470737 KDELR2P33947 212 aa11.71□□□□□ -0.53
SEMA3F-208ENST00000470737 SPATS1Q496A3 300 aa11.71□□□□□ -0.53
SEMA3F-208ENST00000470737 TMEM155Q4W5P6 130 aa11.71□□□□□ -0.53
SEMA3F-208ENST00000470737 ESCO2Q56NI9 601 aa11.71□□□□□ -0.53
SEMA3F-208ENST00000470737 ARMC4Q5T2S8 1044 aa11.71□□□□□ -0.53
SEMA3F-208ENST00000470737 TREML4Q6UXN2 200 aa11.71□□□□□ -0.53
SEMA3F-208ENST00000470737 TSPYL5Q86VY4 417 aaPredicted RBP11.71□□□□□ -0.53
SEMA3F-208ENST00000470737 NKAIN4Q8IVV8 208 aa11.71□□□□□ -0.53
SEMA3F-208ENST00000470737 MOSPD2Q8NHP6 518 aa11.71□□□□□ -0.53
SEMA3F-208ENST00000470737 TMEM255BQ8WV15 326 aa11.71□□□□□ -0.53
SEMA3F-208ENST00000470737 TMEM239Q8WW34 195 aa11.71□□□□□ -0.53
SEMA3F-208ENST00000470737 HDAC2Q92769 488 aaKnown RBP11.71□□□□□ -0.53
SEMA3F-208ENST00000470737 C4orf45Q96LM5 186 aa11.71□□□□□ -0.53
SEMA3F-208ENST00000470737 TXNIPQ9H3M7 391 aa11.71□□□□□ -0.53
SEMA3F-208ENST00000470737 MMP26Q9NRE1 261 aa11.71□□□□□ -0.53
SEMA3F-208ENST00000470737 OR5V1Q9UGF6 321 aa11.71□□□□□ -0.53
SEMA3F-208ENST00000470737 EGFL7Q9UHF1 273 aa11.71□□□□□ -0.53
SEMA3F-208ENST00000470737 NDRG4Q9ULP0 352 aaKnown RBP11.71□□□□□ -0.53
SEMA3F-208ENST00000470737 SH3GLB1Q9Y371 365 aa11.71□□□□□ -0.53
SEMA3F-208ENST00000470737 MED31Q9Y3C7 131 aa11.71□□□□□ -0.53
SEMA3F-208ENST00000470737 IGKV1D-43A0A0B4J1Z2 117 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 A0A1W2PPL8 197 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 POM121CA8CG34 1229 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 NME4O00746 187 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 SURF4O15260 269 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 OR5F1O95221 314 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 ABHD16AO95870 558 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 NGFP01138 241 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 RNASE1P07998 156 aaKnown RBP11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 ZNF12P17014 697 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 MTNR1AP48039 350 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 NUDT2P50583 147 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 MNAT1P51948 309 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 PSME3P61289 254 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 BTG1P62324 171 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 KRT72Q14CN4 511 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 ALG10Q5BKT4 473 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 TMEM255AQ5JRV8 349 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 SLC25A47Q6Q0C1 308 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 NPEPL1Q8NDH3 523 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 SAMD8Q96LT4 415 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 C1QTNF5Q9BXJ0 243 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 WNT5BQ9H1J7 359 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 SPAG4Q9NPE6 437 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 MAN2C1Q9NTJ4 1040 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 NDE1Q9NXR1 346 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 TAGLN3Q9UI15 199 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 KLHL21Q9UJP4 597 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 POLR3KQ9Y2Y1 108 aaPredicted RBP11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 INSIG2Q9Y5U4 225 aa11.7□□□□□ -0.54
SEMA3F-208ENST00000470737 PKD1L1Q8TDX9 2849 aa11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 C12orf71A8MTZ7 269 aa11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 A8MXK9 166 aa11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 TRAPPC2LH3BP13 241 aa11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 ICMTO60725 284 aa11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 MSR1P21757 451 aa11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 TUBG1P23258 451 aa11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 IFNA8P32881 189 aa11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 SLC7A2P52569 658 aa11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 RPL27P61353 136 aaKnown RBP11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 SELENOWP63302 87 aa11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 DEFA6Q01524 100 aa11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 LIPEQ05469 1076 aa11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 CDK5R2Q13319 367 aa11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 LAPTM4AQ15012 233 aa11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 PDLIM3Q53GG5 364 aaPredicted RBP11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 SPRNQ5BIV9 151 aa11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 FAM205BPQ63HN1 556 aa11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 ZNF774Q6NX45 483 aa11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 LRRC28Q86X40 367 aaPredicted RBP11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 MUC20Q8N307 709 aaPredicted RBP11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 OR2Z1Q8NG97 314 aa11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 OR52E2Q8NGJ4 325 aa11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 LIPHQ8WWY8 451 aa11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 NMD3Q96D46 503 aaKnown RBP11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 TUBG2Q9NRH3 451 aa11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 C20orf141Q9NUB4 165 aa11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 DCAF16Q9NXF7 216 aa11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 RIMS3Q9UJD0 308 aa11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 PPP1R3CQ9UQK1 317 aa11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 DOCK11Q5JSL3 2073 aa11.69□□□□□ -0.54
SEMA3F-208ENST00000470737 A6NIZ1 184 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms