RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 NKX2-2O95096 273 aa12.52□□□□□ -0.4
GPC1-208ENST00000469694 PMS2P2O95744 297 aa12.52□□□□□ -0.4
GPC1-208ENST00000469694 OR2T7P0C7T2 308 aa12.52□□□□□ -0.4
GPC1-208ENST00000469694 NID1P14543 1247 aa12.52□□□□□ -0.4
GPC1-208ENST00000469694 PTAFRP25105 342 aa12.52□□□□□ -0.4
GPC1-208ENST00000469694 GPR3P46089 330 aa12.52□□□□□ -0.4
GPC1-208ENST00000469694 SMCO1Q147U7 214 aa12.52□□□□□ -0.4
GPC1-208ENST00000469694 HLA-BQ31612 363 aa12.52□□□□□ -0.4
GPC1-208ENST00000469694 ZNF574Q6ZN55 896 aaPredicted RBP12.52□□□□□ -0.4
GPC1-208ENST00000469694 DND1Q8IYX4 353 aaKnown RBP12.52□□□□□ -0.4
GPC1-208ENST00000469694 OR2T27Q8NH04 317 aa12.52□□□□□ -0.4
GPC1-208ENST00000469694 OR51A7Q8NH64 312 aa12.52□□□□□ -0.4
GPC1-208ENST00000469694 SNX33Q8WV41 574 aa12.52□□□□□ -0.4
GPC1-208ENST00000469694 STACQ99469 402 aa12.52□□□□□ -0.4
GPC1-208ENST00000469694 FKRPQ9H9S5 495 aa12.52□□□□□ -0.4
GPC1-208ENST00000469694 GNG8Q9UK08 70 aa12.52□□□□□ -0.4
GPC1-208ENST00000469694 SIGLEC7Q9Y286 467 aa12.52□□□□□ -0.4
GPC1-208ENST00000469694 ETV7Q9Y603 341 aa12.52□□□□□ -0.4
GPC1-208ENST00000469694 TRAV27A0A087WT01 109 aa12.52□□□□□ -0.41
GPC1-208ENST00000469694 OR4E1P0C645 316 aa12.52□□□□□ -0.41
GPC1-208ENST00000469694 ZNF3P17036 446 aa12.52□□□□□ -0.41
GPC1-208ENST00000469694 PSMB10P40306 273 aa12.52□□□□□ -0.41
GPC1-208ENST00000469694 SKP1P63208 163 aa12.52□□□□□ -0.41
GPC1-208ENST00000469694 SRSF4Q08170 494 aaKnown RBP12.52□□□□□ -0.41
GPC1-208ENST00000469694 MAML2Q8IZL2 1156 aaPredicted RBP12.52□□□□□ -0.41
GPC1-208ENST00000469694 RNF113BQ8IZP6 322 aaKnown RBP12.52□□□□□ -0.41
GPC1-208ENST00000469694 OR13C2Q8NGS9 318 aa12.52□□□□□ -0.41
GPC1-208ENST00000469694 GRHL3Q8TE85 626 aa12.52□□□□□ -0.41
GPC1-208ENST00000469694 RAB33BQ9H082 229 aa12.52□□□□□ -0.41
GPC1-208ENST00000469694 POFUT1Q9H488 388 aa12.52□□□□□ -0.41
GPC1-208ENST00000469694 LANCL2Q9NS86 450 aa12.52□□□□□ -0.41
GPC1-208ENST00000469694 FGF21Q9NSA1 209 aa12.52□□□□□ -0.41
GPC1-208ENST00000469694 FITM1A5D6W6 292 aa12.52□□□□□ -0.41
GPC1-208ENST00000469694 C17orf105B2RV13 164 aa12.52□□□□□ -0.41
GPC1-208ENST00000469694 XRCC3O43542 346 aa12.52□□□□□ -0.41
GPC1-208ENST00000469694 PPP1R3DO95685 299 aa12.52□□□□□ -0.41
GPC1-208ENST00000469694 CT45A8P0DMV1 189 aa12.52□□□□□ -0.41
GPC1-208ENST00000469694 CT45A9P0DMV2 189 aa12.52□□□□□ -0.41
GPC1-208ENST00000469694 CD79AP11912 226 aa12.52□□□□□ -0.41
GPC1-208ENST00000469694 EPHA8P29322 1005 aaPredicted RBP12.52□□□□□ -0.41
GPC1-208ENST00000469694 PEA15Q15121 130 aa12.52□□□□□ -0.41
GPC1-208ENST00000469694 EIF2S3LQ2VIR3 472 aaKnown RBP12.52□□□□□ -0.41
GPC1-208ENST00000469694 PLEKHN1Q494U1 663 aaPredicted RBP12.52□□□□□ -0.41
GPC1-208ENST00000469694 CT45A2Q5DJT8 189 aa12.52□□□□□ -0.41
GPC1-208ENST00000469694 SDR9C7Q8NEX9 313 aa12.52□□□□□ -0.41
GPC1-208ENST00000469694 STEAP2Q8NFT2 490 aa12.52□□□□□ -0.41
GPC1-208ENST00000469694 TMEM239Q8WW34 195 aa12.52□□□□□ -0.41
GPC1-208ENST00000469694 ZMYND19Q96E35 227 aaPredicted RBP12.52□□□□□ -0.41
GPC1-208ENST00000469694 OR10A5Q9H207 317 aa12.52□□□□□ -0.41
GPC1-208ENST00000469694 PILRBQ9UKJ0 227 aa12.52□□□□□ -0.41
GPC1-208ENST00000469694 A0A1B0GTI1 187 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 FADS1O60427 444 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 ITGB2P05107 769 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 DBIP07108 87 aaKnown RBP12.51□□□□□ -0.41
GPC1-208ENST00000469694 AKAIN1P0CW23 69 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 RPS4Y1P22090 263 aaKnown RBP12.51□□□□□ -0.41
GPC1-208ENST00000469694 ZXDAP98168 799 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 TAF13Q15543 124 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 MAMSTRQ6ZN01 415 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 NAA40Q86UY6 237 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 GTPBP8Q8N3Z3 284 aaPredicted RBP12.51□□□□□ -0.41
GPC1-208ENST00000469694 OR51L1Q8NGJ5 315 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 OR5M8Q8NGP6 311 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 OR4C3Q8NH37 302 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 CCDC107Q8WV48 283 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 EDAQ92838 391 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 ARL11Q969Q4 196 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 TCEAL7Q9BRU2 100 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 PAPOLGQ9BWT3 736 aaKnown RBP12.51□□□□□ -0.41
GPC1-208ENST00000469694 OR8D2Q9GZM6 311 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 EGLN1Q9GZT9 426 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 UQCC1Q9NVA1 299 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 ZNF281Q9Y2X9 895 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 CELSR3Q9NYQ7 3312 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 CACNA1CQ13936 2221 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 NUDT19A8MXV4 375 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 F5H0A9 414 aaPredicted RBP12.51□□□□□ -0.41
GPC1-208ENST00000469694 OR2T1O43869 369 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 GTF2F2P13984 249 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 DLSTP36957 453 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 SSTP61278 116 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 CXADRP78310 365 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 IGLV3-21P80748 117 aaPredicted RBP12.51□□□□□ -0.41
GPC1-208ENST00000469694 PLA2G7Q13093 441 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 ZNHIT3Q15649 155 aaPredicted RBP12.51□□□□□ -0.41
GPC1-208ENST00000469694 LIN54Q6MZP7 749 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 STAC2Q6ZMT1 411 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 TMPRSS11FQ6ZWK6 438 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 OR4A4PQ8NGN8 299 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 PTPMT1Q8WUK0 201 aaPredicted RBP12.51□□□□□ -0.41
GPC1-208ENST00000469694 SMOC1Q9H4F8 434 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 TREM1Q9NP99 234 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 ACKR4Q9NPB9 350 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 FLRT3Q9NZU0 649 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 GHRLQ9UBU3 117 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 ICAM5Q9UMF0 924 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 TTC28Q96AY4 2481 aa12.51□□□□□ -0.41
GPC1-208ENST00000469694 LY6G6EA0A0G2JKS1 128 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 A0A1W2PQM1 296 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 CDC14CA4D256 554 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms