RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 CALHM2Q9HA72 323 aa16.75■□□□□ 0.27
SMC4-209ENST00000468653 PLGRKTQ9HBL7 147 aa16.75■□□□□ 0.27
SMC4-209ENST00000468653 FBXL3Q9UKT7 428 aa16.75■□□□□ 0.27
SMC4-209ENST00000468653 CLEC4AQ9UMR7 237 aa16.75■□□□□ 0.27
SMC4-209ENST00000468653 R4GMQ9 66 aa16.75■□□□□ 0.27
SMC4-209ENST00000468653 A0A087WV48 116 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 A0A1W2PPK0 400 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 ZNF879B4DU55 563 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 PNPP00491 289 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 PDGFAP04085 211 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 CAV3P56539 151 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 MFGE8Q08431 387 aaPredicted RBP16.74■□□□□ 0.27
SMC4-209ENST00000468653 DCTN2Q13561 401 aaKnown RBP16.74■□□□□ 0.27
SMC4-209ENST00000468653 TAF13Q15543 124 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 INAQ16352 499 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 ODF4Q2M2E3 257 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 ZNF829Q3KNS6 432 aaPredicted RBP16.74■□□□□ 0.27
SMC4-209ENST00000468653 KLHL24Q6TFL4 600 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 UNQ9370/PRO34162Q6UXP9 181 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 Q6ZS92 163 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.74■□□□□ 0.27
SMC4-209ENST00000468653 CPT1CQ8TCG5 803 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 RGP1Q92546 391 aaPredicted RBP16.74■□□□□ 0.27
SMC4-209ENST00000468653 PHYHIPQ92561 330 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 AP3S1Q92572 193 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 ZNF837Q96EG3 531 aaPredicted RBP16.74■□□□□ 0.27
SMC4-209ENST00000468653 ALKBH3Q96Q83 286 aaPredicted RBP16.74■□□□□ 0.27
SMC4-209ENST00000468653 RNF122Q9H9V4 155 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 SMURF1Q9HCE7 757 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 DKK4Q9UBT3 224 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 PLEKHB1Q9UF11 243 aaPredicted RBP16.74■□□□□ 0.27
SMC4-209ENST00000468653 EMC9Q9Y3B6 208 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 PHF3Q92576 2039 aaKnown RBP16.74■□□□□ 0.27
SMC4-209ENST00000468653 URB1O60287 2271 aaKnown RBP16.74■□□□□ 0.27
SMC4-209ENST00000468653 IQCMA0A1B0GVH7 501 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 ZNF724A8MTY0 619 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 ZNF878C9JN71 531 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 LOC110117498-PIK3R3F6TDL0 507 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 RER1O15258 196 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 NCR1O76036 304 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 UCHL1P09936 223 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 NPR2P20594 1047 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 MRPS34P82930 218 aaKnown RBP16.74■□□□□ 0.27
SMC4-209ENST00000468653 ZNF846Q147U1 533 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 RIPPLY2Q5TAB7 128 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 TPRA1Q86W33 373 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 CATSPERDQ86XM0 798 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 LRRC18Q8N456 261 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 OR10S1Q8NGN2 331 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 NABP1Q96AH0 204 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 WDR12Q9GZL7 423 aaKnown RBP16.74■□□□□ 0.27
SMC4-209ENST00000468653 SLCO5A1Q9H2Y9 848 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 BCO1Q9HAY6 547 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 AKIP1Q9NQ31 210 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 SLC22A13Q9Y226 551 aa16.74■□□□□ 0.27
SMC4-209ENST00000468653 A0A1B0GVC2 190 aa16.73■□□□□ 0.27
SMC4-209ENST00000468653 TMEM269A0A1B0GVZ9 245 aa16.73■□□□□ 0.27
SMC4-209ENST00000468653 SLC22A20A6NK97 555 aa16.73■□□□□ 0.27
SMC4-209ENST00000468653 K7ENP7 123 aa16.73■□□□□ 0.27
SMC4-209ENST00000468653 AQP7O14520 342 aa16.73■□□□□ 0.27
SMC4-209ENST00000468653 YES1P07947 543 aa16.73■□□□□ 0.27
SMC4-209ENST00000468653 BMP4P12644 408 aa16.73■□□□□ 0.27
SMC4-209ENST00000468653 ENDOGQ14249 297 aaKnown RBP16.73■□□□□ 0.27
SMC4-209ENST00000468653 Q499Y3 187 aa16.73■□□□□ 0.27
SMC4-209ENST00000468653 HSD17B12Q53GQ0 312 aa16.73■□□□□ 0.27
SMC4-209ENST00000468653 INO80CQ6PI98 192 aaPredicted RBP16.73■□□□□ 0.27
SMC4-209ENST00000468653 RDH10Q8IZV5 341 aa16.73■□□□□ 0.27
SMC4-209ENST00000468653 GPR148Q8TDV2 347 aa16.73■□□□□ 0.27
SMC4-209ENST00000468653 BORCS5Q969J3 196 aa16.73■□□□□ 0.27
SMC4-209ENST00000468653 TAAR6Q96RI8 345 aa16.73■□□□□ 0.27
SMC4-209ENST00000468653 NOX4Q9NPH5 578 aa16.73■□□□□ 0.27
SMC4-209ENST00000468653 ACACAQ13085 2346 aa16.73■□□□□ 0.27
SMC4-209ENST00000468653 TRAV1-2A0A0B4J238 106 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 ACOD1A6NK06 481 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 CTDSP2O14595 271 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 RGS5O15539 181 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 SRSF10O75494 262 aaKnown RBP16.72■□□□□ 0.27
SMC4-209ENST00000468653 OCM2P0CE71 109 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 MAPK3P27361 379 aaPredicted RBP16.72■□□□□ 0.27
SMC4-209ENST00000468653 HSD11B1P28845 292 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 CEACAM16Q2WEN9 425 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 RHOUQ7L0Q8 258 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 RBMXL3Q8N7X1 1067 aaKnown RBP16.72■□□□□ 0.27
SMC4-209ENST00000468653 IL17RDQ8NFM7 739 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 CEP19Q96LK0 163 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 PRDM14Q9GZV8 571 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 GPR35Q9HC97 309 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 TMEM38BQ9NVV0 291 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 OR52A1Q9UKL2 312 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 ZNF175Q9Y473 711 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 OR6C65A6NJZ3 312 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 K7EM74 188 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 IGHV3-9P01782 118 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 FCGR2AP12318 317 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 DCTDP32321 178 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 MAGEB1P43366 347 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 SOX2P48431 317 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 TSPO2Q5TGU0 170 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 FAM27BQ5VT28 67 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 LINGO2Q7L985 606 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms