RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 MGARPQ8TDB4 240 aa0.64□□□□□ -2.31
SSB-208ENST00000468600 C1orf21Q9H246 121 aa0.64□□□□□ -2.31
SSB-208ENST00000468600 TMEM106BQ9NUM4 274 aa0.64□□□□□ -2.31
SSB-208ENST00000468600 RNF14Q9UBS8 474 aa0.64□□□□□ -2.31
SSB-208ENST00000468600 YARS2Q9Y2Z4 477 aaKnown RBP0.64□□□□□ -2.31
SSB-208ENST00000468600 MAPK8IP3Q9UPT6 1336 aa0.64□□□□□ -2.31
SSB-208ENST00000468600 PRR14LQ5THK1 2151 aa0.63□□□□□ -2.31
SSB-208ENST00000468600 THADAQ6YHU6 1953 aa0.63□□□□□ -2.31
SSB-208ENST00000468600 IGHV3-49A0A0A0MS15 119 aa0.63□□□□□ -2.31
SSB-208ENST00000468600 OR6C74A6NCV1 312 aa0.63□□□□□ -2.31
SSB-208ENST00000468600 SCGNO76038 276 aa0.63□□□□□ -2.31
SSB-208ENST00000468600 CD3GP09693 182 aa0.63□□□□□ -2.31
SSB-208ENST00000468600 CBX1P83916 185 aa0.63□□□□□ -2.31
SSB-208ENST00000468600 PYDC2Q56P42 97 aa0.63□□□□□ -2.31
SSB-208ENST00000468600 YIF1BQ5BJH7 314 aa0.63□□□□□ -2.31
SSB-208ENST00000468600 OR4F3Q6IEY1 312 aa0.63□□□□□ -2.31
SSB-208ENST00000468600 MED27Q6P2C8 311 aa0.63□□□□□ -2.31
SSB-208ENST00000468600 MTMR9Q96QG7 549 aa0.63□□□□□ -2.31
SSB-208ENST00000468600 KRT23Q9C075 422 aa0.63□□□□□ -2.31
SSB-208ENST00000468600 PPA2Q9H2U2 334 aa0.63□□□□□ -2.31
SSB-208ENST00000468600 TRIM45Q9H8W5 580 aaPredicted RBP0.63□□□□□ -2.31
SSB-208ENST00000468600 ATP6V0A2Q9Y487 856 aa0.63□□□□□ -2.31
SSB-208ENST00000468600 NOTCH1P46531 2555 aa0.63□□□□□ -2.31
SSB-208ENST00000468600 CAMTA1Q9Y6Y1 1673 aa0.62□□□□□ -2.31
SSB-208ENST00000468600 ARHGEF35A5YM69 484 aa0.62□□□□□ -2.31
SSB-208ENST00000468600 KRT87PA6NCN2 255 aa0.62□□□□□ -2.31
SSB-208ENST00000468600 SDHAF1A6NFY7 115 aa0.62□□□□□ -2.31
SSB-208ENST00000468600 PRPSAP2O60256 369 aa0.62□□□□□ -2.31
SSB-208ENST00000468600 SLC22A5O76082 557 aa0.62□□□□□ -2.31
SSB-208ENST00000468600 STMN1P16949 149 aa0.62□□□□□ -2.31
SSB-208ENST00000468600 GAP43P17677 238 aa0.62□□□□□ -2.31
SSB-208ENST00000468600 PAX7P23759 505 aa0.62□□□□□ -2.31
SSB-208ENST00000468600 CD1CP29017 333 aa0.62□□□□□ -2.31
SSB-208ENST00000468600 BIKQ13323 160 aa0.62□□□□□ -2.31
SSB-208ENST00000468600 TPD52L1Q16890 204 aaPredicted RBP0.62□□□□□ -2.31
SSB-208ENST00000468600 CCDC184Q52MB2 194 aa0.62□□□□□ -2.31
SSB-208ENST00000468600 TCEAL5Q5H9L2 206 aa0.62□□□□□ -2.31
SSB-208ENST00000468600 TBPL2Q6SJ96 375 aa0.62□□□□□ -2.31
SSB-208ENST00000468600 OR5T1Q8NG75 326 aa0.62□□□□□ -2.31
SSB-208ENST00000468600 TCEAL3Q969E4 200 aa0.62□□□□□ -2.31
SSB-208ENST00000468600 GGTLC1Q9BX51 225 aa0.62□□□□□ -2.31
SSB-208ENST00000468600 LINC00574Q9H8X3 128 aa0.62□□□□□ -2.31
SSB-208ENST00000468600 ZNF492Q9P255 531 aa0.62□□□□□ -2.31
SSB-208ENST00000468600 LTBP2Q14767 1821 aa0.61□□□□□ -2.31
SSB-208ENST00000468600 TRAV19A0A0A6YYK7 116 aa0.61□□□□□ -2.31
SSB-208ENST00000468600 METTL21EPA6NDL7 271 aa0.61□□□□□ -2.31
SSB-208ENST00000468600 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.61□□□□□ -2.31
SSB-208ENST00000468600 ARPC3O15145 178 aa0.61□□□□□ -2.31
SSB-208ENST00000468600 EIF1BO60739 113 aaKnown RBP0.61□□□□□ -2.31
SSB-208ENST00000468600 CLDN9O95484 217 aa0.61□□□□□ -2.31
SSB-208ENST00000468600 C1orf105O95561 183 aa0.61□□□□□ -2.31
SSB-208ENST00000468600 FSTL3O95633 263 aa0.61□□□□□ -2.31
SSB-208ENST00000468600 OR5H8P0DN80 308 aa0.61□□□□□ -2.31
SSB-208ENST00000468600 RAB3AP20336 220 aa0.61□□□□□ -2.31
SSB-208ENST00000468600 F2RP25116 425 aa0.61□□□□□ -2.31
SSB-208ENST00000468600 EIF1P41567 113 aaKnown RBP0.61□□□□□ -2.31
SSB-208ENST00000468600 ATP1B3P54709 279 aa0.61□□□□□ -2.31
SSB-208ENST00000468600 MXD1Q05195 221 aa0.61□□□□□ -2.31
SSB-208ENST00000468600 MRPL28Q13084 256 aaKnown RBP0.61□□□□□ -2.31
SSB-208ENST00000468600 SLC25A48Q6ZT89 311 aaKnown RBP0.61□□□□□ -2.31
SSB-208ENST00000468600 OR11H7Q8NGC8 314 aa0.61□□□□□ -2.31
SSB-208ENST00000468600 CNDP1Q96KN2 507 aa0.61□□□□□ -2.31
SSB-208ENST00000468600 SENP8Q96LD8 212 aa0.61□□□□□ -2.31
SSB-208ENST00000468600 RBM14Q96PK6 669 aaKnown RBP0.61□□□□□ -2.31
SSB-208ENST00000468600 CNN2Q99439 309 aaKnown RBP0.61□□□□□ -2.31
SSB-208ENST00000468600 IL37Q9NZH6 218 aa0.61□□□□□ -2.31
SSB-208ENST00000468600 CHRNA9Q9UGM1 479 aa0.61□□□□□ -2.31
SSB-208ENST00000468600 VANGL2Q9ULK5 521 aa0.61□□□□□ -2.31
SSB-208ENST00000468600 KCNE3Q9Y6H6 103 aa0.61□□□□□ -2.31
SSB-208ENST00000468600 OR5H1A6NKK0 313 aa0.6□□□□□ -2.31
SSB-208ENST00000468600 F6UB75 175 aa0.6□□□□□ -2.31
SSB-208ENST00000468600 SOX15O60248 233 aa0.6□□□□□ -2.31
SSB-208ENST00000468600 SURF6O75683 361 aaKnown RBP0.6□□□□□ -2.31
SSB-208ENST00000468600 PAHP00439 452 aa0.6□□□□□ -2.31
SSB-208ENST00000468600 CEACAM3P40198 252 aa0.6□□□□□ -2.31
SSB-208ENST00000468600 GRIA1P42261 906 aa0.6□□□□□ -2.31
SSB-208ENST00000468600 GFERP55789 205 aa0.6□□□□□ -2.31
SSB-208ENST00000468600 SOHLH1Q5JUK2 328 aa0.6□□□□□ -2.31
SSB-208ENST00000468600 APOBEC3HQ6NTF7 200 aaKnown RBP0.6□□□□□ -2.31
SSB-208ENST00000468600 UBE2Q2Q8WVN8 375 aa0.6□□□□□ -2.31
SSB-208ENST00000468600 FARSBQ9NSD9 589 aaKnown RBP0.6□□□□□ -2.31
SSB-208ENST00000468600 RGSL1A5PLK6 1076 aa0.59□□□□□ -2.31
SSB-208ENST00000468600 GOLGA6L4A6NEF3 574 aa0.59□□□□□ -2.31
SSB-208ENST00000468600 KRBOX1C9JBD0 128 aa0.59□□□□□ -2.31
SSB-208ENST00000468600 PLIN3O60664 434 aa0.59□□□□□ -2.31
SSB-208ENST00000468600 GLSO94925 669 aaPredicted RBP0.59□□□□□ -2.31
SSB-208ENST00000468600 SCELO95171 688 aa0.59□□□□□ -2.31
SSB-208ENST00000468600 DIRAS3O95661 229 aa0.59□□□□□ -2.31
SSB-208ENST00000468600 MDH1P40925 334 aaKnown RBP0.59□□□□□ -2.31
SSB-208ENST00000468600 HCAR3P49019 387 aa0.59□□□□□ -2.31
SSB-208ENST00000468600 CCNG1P51959 295 aa0.59□□□□□ -2.31
SSB-208ENST00000468600 SYNJ2BPP57105 145 aa0.59□□□□□ -2.31
SSB-208ENST00000468600 TWF1Q12792 350 aa0.59□□□□□ -2.31
SSB-208ENST00000468600 ZNF77Q15935 545 aa0.59□□□□□ -2.31
SSB-208ENST00000468600 SLC36A3Q495N2 470 aa0.59□□□□□ -2.31
SSB-208ENST00000468600 AMMECR1LQ6DCA0 310 aa0.59□□□□□ -2.31
SSB-208ENST00000468600 GTPBP8Q8N3Z3 284 aaPredicted RBP0.59□□□□□ -2.31
SSB-208ENST00000468600 EMG1Q92979 244 aaKnown RBP0.59□□□□□ -2.31
SSB-208ENST00000468600 CCDC47Q96A33 483 aaKnown RBP0.59□□□□□ -2.31
SSB-208ENST00000468600 SERPINB12Q96P63 405 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms