RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 OR1J2Q8NGS2 313 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 C10orf105Q8TEF2 133 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 WFDC12Q8WWY7 111 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 RASD2Q96D21 266 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 CLPTM1LQ96KA5 538 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 POM121L2Q96KW2 1035 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 ZNF570Q96NI8 536 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 SNX18Q96RF0 628 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 MRPL37Q9BZE1 423 aaKnown RBP9.58□□□□□ -0.88
COL4A6-205ENST00000468338 KCNN2Q9H2S1 579 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 OR52D1Q9H346 318 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 RNF121Q9H920 327 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 POLE4Q9NR33 117 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 TMCC3Q9ULS5 477 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 IER3IP1Q9Y5U9 82 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 NF1P21359 2839 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 IGLV3-9A0A075B6K5 115 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 LOC100509620A0A075B734 347 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 IQCMA0A1B0GVH7 501 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 VWC2LB2RUY7 222 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 XKRYO14609 159 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 SYNGR3O43761 229 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 LY6HO94772 140 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 CCL2P13500 99 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 ZNF250P15622 560 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 MSR1P21757 451 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 APEX1P27695 318 aaKnown RBP9.57□□□□□ -0.88
COL4A6-205ENST00000468338 CDKN2AP42771 156 aaKnown RBP9.57□□□□□ -0.88
COL4A6-205ENST00000468338 RPS6KA3P51812 740 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 UCP2P55851 309 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 RPS23P62266 143 aaKnown RBP9.57□□□□□ -0.88
COL4A6-205ENST00000468338 GALK2Q01415 458 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 PLP2Q04941 152 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 TBC1D28Q2M2D7 210 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 CLEC2AQ6UVW9 174 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 ZNF620Q6ZNG0 422 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 GNPDA2Q8TDQ7 276 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 UTP4Q969X6 686 aaKnown RBP9.57□□□□□ -0.88
COL4A6-205ENST00000468338 DDOQ99489 341 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 RHNO1Q9BSD3 238 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 BTBD10Q9BSF8 475 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 THTPAQ9BU02 230 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 ZNF416Q9BWM5 594 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 BCL2L14Q9BZR8 327 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 OR2H1Q9GZK4 316 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 WNT5BQ9H1J7 359 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 SYT4Q9H2B2 425 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 MYOZ1Q9NP98 299 aaPredicted RBP9.57□□□□□ -0.88
COL4A6-205ENST00000468338 IL20Q9NYY1 176 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 IL20RAQ9UHF4 553 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 TIMM10BQ9Y5J6 103 aa9.57□□□□□ -0.88
COL4A6-205ENST00000468338 ANK3Q12955 4377 aaKnown RBP9.56□□□□□ -0.88
COL4A6-205ENST00000468338 AQP12BA6NM10 295 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 NDUFS8O00217 210 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 TNFRSF11BO00300 401 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 DCTN6O00399 190 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 SOCS2O14508 198 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 IDH3BO43837 385 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 KHDRBS3O75525 346 aaKnown RBP9.56□□□□□ -0.88
COL4A6-205ENST00000468338 COX5BP10606 129 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 SLC25A16P16260 332 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 STOMP27105 288 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 SLC6A6P31641 620 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 WNT5AP41221 380 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 GUCA1AP43080 201 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-205ENST00000468338 RAD52P43351 418 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 PCBD1P61457 104 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 LSM6P62312 80 aaKnown RBP9.56□□□□□ -0.88
COL4A6-205ENST00000468338 HSF2Q03933 536 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 LOXL1Q08397 574 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-205ENST00000468338 KCNMB1Q16558 191 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 FAM98BQ52LJ0 330 aaKnown RBP9.56□□□□□ -0.88
COL4A6-205ENST00000468338 OR2T5Q6IEZ7 315 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 UGT2A3Q6UWM9 527 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 LRP11Q86VZ4 500 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 AQP12AQ8IXF9 295 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 ADGRG5Q8IZF4 528 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 ZCCHC24Q8N2G6 241 aaKnown RBP9.56□□□□□ -0.88
COL4A6-205ENST00000468338 OR2T29Q8NH02 315 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 AKR7LQ8NHP1 331 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 FANK1Q8TC84 345 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 NEU4Q8WWR8 484 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-205ENST00000468338 FAM168AQ92567 244 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 CCDC124Q96CT7 223 aaKnown RBP9.56□□□□□ -0.88
COL4A6-205ENST00000468338 ERMAPQ96PL5 475 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-205ENST00000468338 VRK1Q99986 396 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-205ENST00000468338 NUAK2Q9H093 628 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 RAB1BQ9H0U4 201 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 LRMDAQ9H2I8 198 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 CDH20Q9HBT6 801 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 CCNB1IP1Q9NPC3 277 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 VNN3Q9NY84 501 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 MYEF2Q9P2K5 600 aaKnown RBP9.56□□□□□ -0.88
COL4A6-205ENST00000468338 FKBP7Q9Y680 259 aa9.56□□□□□ -0.88
COL4A6-205ENST00000468338 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.56□□□□□ -0.88
COL4A6-205ENST00000468338 IGLV1-36A0A0B4J1U3 117 aa9.55□□□□□ -0.88
COL4A6-205ENST00000468338 A0A1W2PPL8 197 aa9.55□□□□□ -0.88
COL4A6-205ENST00000468338 LOC390937A0A1W2PQ73 354 aa9.55□□□□□ -0.88
COL4A6-205ENST00000468338 C12orf71A8MTZ7 269 aa9.55□□□□□ -0.88
COL4A6-205ENST00000468338 M0R233 179 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms