RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 PPOXP50336 477 aa6.87□□□□□ -1.31
SPTBN1-204ENST00000467371 TIAL1Q01085 375 aaKnown RBP eCLIP6.87□□□□□ -1.314e-7■■■□□ 15.4
SPTBN1-204ENST00000467371 SF3A2Q15428 464 aaKnown RBP6.87□□□□□ -1.31
SPTBN1-204ENST00000467371 LY6G6FQ5SQ64 297 aa6.87□□□□□ -1.31
SPTBN1-204ENST00000467371 FIGNL1Q6PIW4 674 aa6.87□□□□□ -1.31
SPTBN1-204ENST00000467371 CXCL17Q6UXB2 119 aa6.87□□□□□ -1.31
SPTBN1-204ENST00000467371 DPY19L2P2Q6ZN68 376 aa6.87□□□□□ -1.31
SPTBN1-204ENST00000467371 ZNF605Q86T29 641 aa6.87□□□□□ -1.31
SPTBN1-204ENST00000467371 GLCCI1Q86VQ1 547 aa6.87□□□□□ -1.31
SPTBN1-204ENST00000467371 TDHQ8IZJ6 230 aa6.87□□□□□ -1.31
SPTBN1-204ENST00000467371 POC1AQ8NBT0 407 aa6.87□□□□□ -1.31
SPTBN1-204ENST00000467371 OR2M7Q8NG81 312 aa6.87□□□□□ -1.31
SPTBN1-204ENST00000467371 OR11H7Q8NGC8 314 aa6.87□□□□□ -1.31
SPTBN1-204ENST00000467371 TMEM171Q8WVE6 324 aa6.87□□□□□ -1.31
SPTBN1-204ENST00000467371 HSPA12BQ96MM6 686 aa6.87□□□□□ -1.31
SPTBN1-204ENST00000467371 OR14A2Q96R54 314 aa6.87□□□□□ -1.31
SPTBN1-204ENST00000467371 PFDN5Q99471 154 aa6.87□□□□□ -1.31
SPTBN1-204ENST00000467371 BPIFA1Q9NP55 256 aa6.87□□□□□ -1.31
SPTBN1-204ENST00000467371 STUB1Q9UNE7 303 aa6.87□□□□□ -1.31
SPTBN1-204ENST00000467371 MEMO1Q9Y316 297 aa6.87□□□□□ -1.31
SPTBN1-204ENST00000467371 STYXL1Q9Y6J8 313 aa6.87□□□□□ -1.31
SPTBN1-204ENST00000467371 COL11A1P12107 1806 aaPredicted RBP6.87□□□□□ -1.31
SPTBN1-204ENST00000467371 A0A096LPI6 279 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 A0A0G2JLL6 359 aaPredicted RBP6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 UBFD1O14562 309 aaKnown RBP6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 SCGNO76038 276 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 NMBP08949 121 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 IRF1P10914 325 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 CSNK2A2P19784 350 aaPredicted RBP6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 FCARP24071 287 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 CD96P40200 585 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 ARL4AP40617 200 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 PRLHRP49683 370 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 RORCP51449 518 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 FCN2Q15485 313 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 ACSM3Q53FZ2 586 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 WDR25Q64LD2 544 aaPredicted RBP6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 GDPGP1Q6ZNW5 385 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 SHFQ7M4L6 423 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 ZNF367Q7RTV3 350 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 PRSS45Q7RTY3 260 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 NANOGP1Q8N7R0 232 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 C16orf78Q8WTQ4 265 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 C11orf40Q8WZ69 217 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 COL21A1Q96P44 957 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 SLC25A27O95847 323 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 IFNA10P01566 189 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 ITGB7P26010 798 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 RFC3P40938 356 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 LHX1P48742 406 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 DAPP51397 102 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 CDC42P60953 191 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 MRPS34P82930 218 aaKnown RBP6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 EIF4HQ15056 248 aaKnown RBP6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 RPE65Q16518 533 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 ENPP6Q6UWR7 440 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 FAM131AQ6UXB0 335 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 ACOT7LQ6ZUV0 252 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 CHMP1BQ7LBR1 199 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 TMED4Q7Z7H5 227 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 WDR20Q8TBZ3 569 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 TMPRSS13Q9BYE2 586 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 SLC29A3Q9BZD2 475 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 TLNRD1Q9H1K6 362 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 SYT4Q9H2B2 425 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 RHOJQ9H4E5 214 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 GSTO2Q9H4Y5 243 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 COA3Q9Y2R0 106 aaPredicted RBP6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 SLC6A5Q9Y345 797 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 NME7Q9Y5B8 376 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 HS3ST3A1Q9Y663 406 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 TRIP11Q15643 1979 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 SIP14410 1827 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 SSC5DA1L4H1 1573 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 TRAV19A0A0A6YYK7 116 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 GLYATL1P3A0A0U1RQE8 302 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 A0A1B0GUS0 222 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 CCL22O00626 93 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 LYRM1O43325 122 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 GLUD1P00367 558 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 C1RP00736 705 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 OR4Q2P0C623 313 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 ERVPABLB-1P60509 514 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 ACKR1Q16570 336 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 CD276Q5ZPR3 534 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 TMEM42Q69YG0 159 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 ZNF621Q6ZSS3 439 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 RASSF6Q6ZTQ3 369 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 DNAJC22Q8N4W6 341 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 TFGQ92734 400 aaPredicted RBP6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 MRPS24Q96EL2 167 aaKnown RBP6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 SCMH1Q96GD3 660 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 GGACTQ9BVM4 153 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 NLE1Q9NVX2 485 aaPredicted RBP6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 DDIT4Q9NX09 232 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 GSKIPQ9P0R6 139 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 ING1Q9UK53 422 aaPredicted RBP6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 NEUROG3Q9Y4Z2 214 aa6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 GOLGA4Q13439 2230 aaKnown RBP6.86□□□□□ -1.31
SPTBN1-204ENST00000467371 IGKV6D-21A0A0A0MT36 114 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms