RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-208	ENST00000465627	SARAF	Q96BY9	339 aa		7.76	□□□□□ -1.17
UBA3-208	ENST00000465627	ISOC1	Q96CN7	298 aa		7.76	□□□□□ -1.17
UBA3-208	ENST00000465627	PELI1	Q96FA3	418 aa		7.76	□□□□□ -1.17
UBA3-208	ENST00000465627	FOXN4	Q96NZ1	517 aa		7.76	□□□□□ -1.17
UBA3-208	ENST00000465627	TBX5	Q99593	518 aa		7.76	□□□□□ -1.17
UBA3-208	ENST00000465627	SLX1A	Q9BQ83	275 aa		7.76	□□□□□ -1.17
UBA3-208	ENST00000465627	BCL7B	Q9BQE9	202 aa		7.76	□□□□□ -1.17
UBA3-208	ENST00000465627	NDUFB11	Q9NX14	153 aa		7.76	□□□□□ -1.17
UBA3-208	ENST00000465627	BABAM2	Q9NXR7	383 aa		7.76	□□□□□ -1.17
UBA3-208	ENST00000465627	CYB5R1	Q9UHQ9	305 aa		7.76	□□□□□ -1.17
UBA3-208	ENST00000465627	MRM2	Q9UI43	246 aa	Known RBP	7.76	□□□□□ -1.17
UBA3-208	ENST00000465627	ST6GALNAC2	Q9UJ37	374 aa		7.76	□□□□□ -1.17
UBA3-208	ENST00000465627	KCNG2	Q9UJ96	466 aa		7.76	□□□□□ -1.17
UBA3-208	ENST00000465627	MCTS1	Q9ULC4	181 aa	Known RBP	7.76	□□□□□ -1.17
UBA3-208	ENST00000465627	LHFPL6	Q9Y693	200 aa		7.76	□□□□□ -1.17
UBA3-208	ENST00000465627		H3BMQ9	156 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	CCRL2	O00421	344 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	ZNF593	O00488	134 aa	Predicted RBP	7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	MAGEB4	O15481	346 aa	Predicted RBP	7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	DHH	O43323	396 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	PLPP2	O43688	288 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	AKAP8	O43823	692 aa	Known RBP	7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	SS18L1	O75177	396 aa	Predicted RBP	7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	SRSF10	O75494	262 aa	Known RBP	7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	CD36	P16671	472 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	AGTR1	P30556	359 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	ATP6V1E1	P36543	226 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	CRYBB2	P43320	205 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	EGR3	Q06889	387 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	GPR50	Q13585	617 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	ENDOG	Q14249	297 aa	Known RBP	7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	TST	Q16762	297 aa	Known RBP	7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	CNPY1	Q3B7I2	92 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	ACSF3	Q4G176	576 aa	Predicted RBP	7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	KRTCAP3	Q53RY4	240 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	TSPO2	Q5TGU0	170 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	CARD17	Q5XLA6	110 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	DMKN	Q6E0U4	476 aa	Predicted RBP	7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	RTL6	Q6ICC9	239 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	SLC18B1	Q6NT16	456 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	SEM1	Q6ZVN7	128 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	AAED1	Q7RTV5	226 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	TUSC5	Q8IXB3	177 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	OR10S1	Q8NGN2	331 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	RPL3L	Q92901	407 aa	Known RBP	7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	C12orf43	Q96C57	262 aa	Known RBP	7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	TRMT61A	Q96FX7	289 aa	Known RBP	7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	MAP6	Q96JE9	813 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	C4orf36	Q96KX1	117 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	PGLYRP3	Q96LB9	341 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	ABHD6	Q9BV23	337 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	PNRC2	Q9NPJ4	139 aa	Known RBP	7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	ZNF71	Q9NQZ8	489 aa	Predicted RBP	7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	POLE4	Q9NR33	117 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	LUZP4	Q9P127	313 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	RSL24D1	Q9UHA3	163 aa	Known RBP	7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	CAMK2A	Q9UQM7	478 aa		7.75	□□□□□ -1.17
UBA3-208	ENST00000465627	MBD3L4	A6NDZ8	208 aa	Predicted RBP	7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	MBD3L3	A6NE82	208 aa	Predicted RBP	7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	MBD3L5	A6NJ08	208 aa	Predicted RBP	7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	CD8B2	A6NJW9	211 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	SLC22A20	A6NK97	555 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	AHRR	A9YTQ3	701 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	ZNF670-ZNF695	F2Z2N8	137 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	LRRTM2	O43300	516 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	SLC43A1	O75387	559 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	GPX5	O75715	221 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	SC5D	O75845	299 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	SULT1C4	O75897	302 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	ATE1	O95260	518 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	MT-ND5	P03915	603 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	CD1A	P06126	327 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	YES1	P07947	543 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	NR2C1	P13056	603 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	CD53	P19397	219 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	GADD45A	P24522	165 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	PCSK6	P29122	969 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	CDA	P32320	146 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	CAPZA2	P47755	286 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	TGM4	P49221	684 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	GTF2A1	P52655	376 aa	Predicted RBP	7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	NANOS3	P60323	173 aa	Known RBP	7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	LSM6	P62312	80 aa	Known RBP	7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	ACTA2	P62736	377 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	ACTG2	P63267	376 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	MRPS34	P82930	218 aa	Known RBP	7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	FAM27B	Q5VT28	67 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	NSUN5P2	Q63ZY6	315 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	FDX2	Q6P4F2	183 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	SPNS3	Q6ZMD2	512 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	TMPRSS11A	Q6ZMR5	421 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	NUFIP2	Q7Z417	695 aa	Known RBP	7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	KCTD20	Q7Z5Y7	419 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	P2RY8	Q86VZ1	359 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	KLB	Q86Z14	1044 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	ALDH16A1	Q8IZ83	802 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	OR6N2	Q8NGY6	317 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	CPT1C	Q8TCG5	803 aa		7.74	□□□□□ -1.17
UBA3-208	ENST00000465627	RAB2B	Q8WUD1	216 aa		7.74	□□□□□ -1.17

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