RNA–Protein interactions for RNA: ENST00000463994.4

CDKL5-203, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 2,632 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-203ENST00000463994 SCDO00767 359 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 YY2O15391 372 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 SPINT1O43278 529 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 CDC40O60508 579 aaKnown RBP eCLIP6.44□□□□□ -1.38
CDKL5-203ENST00000463994 ALOX12BO75342 701 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 NDUFS3O75489 264 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 STK16O75716 305 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 SLCO2B1O94956 709 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 CPSF4O95639 269 aaKnown RBP6.44□□□□□ -1.38
CDKL5-203ENST00000463994 ONECUT2O95948 504 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 IGHA1P01876 353 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 EPHX1P07099 455 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 CXCL8P10145 99 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 CD34P28906 385 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 MC5RP33032 325 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 RPS26P62854 115 aaKnown RBP6.44□□□□□ -1.38
CDKL5-203ENST00000463994 SPOCK1Q08629 439 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 MESP2Q0VG99 397 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 CRMP1Q14194 572 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 RGNQ15493 299 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 SLC25A52Q3SY17 297 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 COA6Q5JTJ3 125 aaKnown RBP6.44□□□□□ -1.38
CDKL5-203ENST00000463994 PRAMEF17Q5VTA0 474 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 PODNL1Q6PEZ8 512 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 GKN2Q86XP6 184 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 OR4C16Q8NGL9 310 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 S100A16Q96FQ6 103 aaKnown RBP6.44□□□□□ -1.38
CDKL5-203ENST00000463994 FAM46AQ96IP4 442 aaKnown RBP6.44□□□□□ -1.38
CDKL5-203ENST00000463994 SEC22AQ96IW7 307 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 MRPL13Q9BYD1 178 aaKnown RBP6.44□□□□□ -1.38
CDKL5-203ENST00000463994 TRIM36Q9NQ86 728 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 IL36AQ9UHA7 158 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 COLQQ9Y215 455 aaPredicted RBP6.44□□□□□ -1.38
CDKL5-203ENST00000463994 MRPS18BQ9Y676 258 aaKnown RBP6.44□□□□□ -1.38
CDKL5-203ENST00000463994 LOC285556D6RIA3 1793 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 TGIF2-C20orf24A0A0A6YYL0 155 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 A0A1W2PR48 441 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 UNC119BA6NIH7 251 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 LRP3O75074 770 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 SCGB1D1O95968 90 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 PGA4P0DJD7 388 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 PGA5P0DJD9 388 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 SNCAP37840 140 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 RPL34P49207 117 aaKnown RBP6.44□□□□□ -1.38
CDKL5-203ENST00000463994 CLDN18P56856 261 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 ERVFRD-1P60508 538 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 CDK5Q00535 292 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 C4orf17Q53FE4 359 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 TMEM69Q5SWH9 247 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 LDLRAD2Q5SZI1 272 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 ZNF343Q6P1L6 599 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 CNKSR3Q6P9H4 555 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 FBXW12Q6X9E4 464 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 Q6ZRG5 221 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 SLC25A26Q70HW3 274 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 TAS1R1Q7RTX1 841 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 TMED4Q7Z7H5 227 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 CMTM1Q8IZ96 169 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 H1FOOQ8IZA3 346 aaPredicted RBP6.44□□□□□ -1.38
CDKL5-203ENST00000463994 NPWQ8N729 165 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 ZNF738Q8NE65 137 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 GRHL3Q8TE85 626 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 TMEM234Q8WY98 164 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 DCUN1D4Q92564 292 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 TSLPQ969D9 159 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 ZNF649Q9BS31 505 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 CHST6Q9GZX3 395 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 CST9LQ9H4G1 147 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 SLC2A9Q9NRM0 540 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 FKBP11Q9NYL4 201 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 NUDT4Q9NZJ9 180 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 SRPK3Q9UPE1 567 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 OSGIN2Q9Y236 505 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 SLC5A6Q9Y289 635 aa6.44□□□□□ -1.38
CDKL5-203ENST00000463994 BPTFQ12830 3046 aa6.43□□□□□ -1.38
CDKL5-203ENST00000463994 DNAJC25-GNG10A0A024R161 153 aa6.43□□□□□ -1.38
CDKL5-203ENST00000463994 A0A1B0GV72 72 aa6.43□□□□□ -1.38
CDKL5-203ENST00000463994 PGPEP1LA6NFU8 196 aa6.43□□□□□ -1.38
CDKL5-203ENST00000463994 MGAT4DA6NG13 374 aa6.43□□□□□ -1.38
CDKL5-203ENST00000463994 ZNF727A8MUV8 499 aa6.43□□□□□ -1.38
CDKL5-203ENST00000463994 C17orf105B2RV13 164 aa6.43□□□□□ -1.38
CDKL5-203ENST00000463994 K7EPK0 472 aa6.43□□□□□ -1.38
CDKL5-203ENST00000463994 GEMIN2O14893 280 aaKnown RBP6.43□□□□□ -1.38
CDKL5-203ENST00000463994 ATXN7O15265 892 aaPredicted RBP6.43□□□□□ -1.38
CDKL5-203ENST00000463994 NDUFB8O95169 186 aa6.43□□□□□ -1.38
CDKL5-203ENST00000463994 LRATO95237 230 aa6.43□□□□□ -1.38
CDKL5-203ENST00000463994 PPP1R3DO95685 299 aa6.43□□□□□ -1.38
CDKL5-203ENST00000463994 CSF1P09603 554 aa6.43□□□□□ -1.38
CDKL5-203ENST00000463994 RAB40ALP0C0E4 278 aa6.43□□□□□ -1.38
CDKL5-203ENST00000463994 ZNF7P17097 686 aaPredicted RBP6.43□□□□□ -1.38
CDKL5-203ENST00000463994 FCARP24071 287 aa6.43□□□□□ -1.38
CDKL5-203ENST00000463994 ARR3P36575 388 aa6.43□□□□□ -1.38
CDKL5-203ENST00000463994 COMPP49747 757 aaPredicted RBP6.43□□□□□ -1.38
CDKL5-203ENST00000463994 MMP16P51512 607 aa6.43□□□□□ -1.38
CDKL5-203ENST00000463994 ZNF157P51786 506 aaPredicted RBP6.43□□□□□ -1.38
CDKL5-203ENST00000463994 DUSP5Q16690 384 aa6.43□□□□□ -1.38
CDKL5-203ENST00000463994 PCGF3Q3KNV8 242 aa6.43□□□□□ -1.38
CDKL5-203ENST00000463994 ALG10BQ5I7T1 473 aa6.43□□□□□ -1.38
CDKL5-203ENST00000463994 SOHLH1Q5JUK2 328 aa6.43□□□□□ -1.38
CDKL5-203ENST00000463994 RTL6Q6ICC9 239 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms