RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 OR9Q2Q8NGE9 314 aa13.91□□□□□ -0.18
COL1A1-202ENST00000463440 OR52L1Q8NGH7 329 aa13.91□□□□□ -0.18
COL1A1-202ENST00000463440 OR4C15Q8NGM1 316 aa13.91□□□□□ -0.18
COL1A1-202ENST00000463440 OR2T29Q8NH02 315 aa13.91□□□□□ -0.18
COL1A1-202ENST00000463440 CLPTM1LQ96KA5 538 aa13.91□□□□□ -0.18
COL1A1-202ENST00000463440 BPESC1Q9GZL8 116 aa13.91□□□□□ -0.18
COL1A1-202ENST00000463440 REEP1Q9H902 201 aa13.91□□□□□ -0.18
COL1A1-202ENST00000463440 HINT3Q9NQE9 182 aaKnown RBP13.91□□□□□ -0.18
COL1A1-202ENST00000463440 POLR1DQ9Y2S0 133 aa13.91□□□□□ -0.18
COL1A1-202ENST00000463440 CHD3Q12873 2000 aaKnown RBP13.9□□□□□ -0.18
COL1A1-202ENST00000463440 GYG2O15488 501 aa13.9□□□□□ -0.18
COL1A1-202ENST00000463440 ICMTO60725 284 aa13.9□□□□□ -0.18
COL1A1-202ENST00000463440 UBOX5O94941 541 aa13.9□□□□□ -0.18
COL1A1-202ENST00000463440 IGHV3-13P01766 116 aa13.9□□□□□ -0.18
COL1A1-202ENST00000463440 RAP2AP10114 183 aa13.9□□□□□ -0.18
COL1A1-202ENST00000463440 HIST1H1CP16403 213 aaKnown RBP13.9□□□□□ -0.18
COL1A1-202ENST00000463440 HTR5AP47898 357 aa13.9□□□□□ -0.18
COL1A1-202ENST00000463440 GZMKP49863 264 aa13.9□□□□□ -0.18
COL1A1-202ENST00000463440 KCNMB1Q16558 191 aa13.9□□□□□ -0.18
COL1A1-202ENST00000463440 CYB5R2Q6BCY4 276 aa13.9□□□□□ -0.18
COL1A1-202ENST00000463440 OR4K13Q8NH42 304 aa13.9□□□□□ -0.18
COL1A1-202ENST00000463440 ABHD4Q8TB40 342 aa13.9□□□□□ -0.18
COL1A1-202ENST00000463440 C4orf45Q96LM5 186 aa13.9□□□□□ -0.18
COL1A1-202ENST00000463440 NMNAT3Q96T66 252 aa13.9□□□□□ -0.18
COL1A1-202ENST00000463440 BTBD10Q9BSF8 475 aa13.9□□□□□ -0.18
COL1A1-202ENST00000463440 SRA1Q9HD15 236 aaKnown RBP13.9□□□□□ -0.18
COL1A1-202ENST00000463440 PLEK2Q9NYT0 353 aa13.9□□□□□ -0.18
COL1A1-202ENST00000463440 ASH2LQ9UBL3 628 aa13.9□□□□□ -0.18
COL1A1-202ENST00000463440 SAMHD1Q9Y3Z3 626 aaKnown RBP13.9□□□□□ -0.18
COL1A1-202ENST00000463440 CDH10Q9Y6N8 788 aa13.9□□□□□ -0.18
COL1A1-202ENST00000463440 IGHV4-61A0A0C4DH41 118 aa13.89□□□□□ -0.19
COL1A1-202ENST00000463440 C17orf100A8MU93 164 aa13.89□□□□□ -0.19
COL1A1-202ENST00000463440 A8MV72 311 aaPredicted RBP13.89□□□□□ -0.19
COL1A1-202ENST00000463440 H3BSA7 217 aa13.89□□□□□ -0.19
COL1A1-202ENST00000463440 ACOT8O14734 319 aa13.89□□□□□ -0.19
COL1A1-202ENST00000463440 MPZL1O95297 269 aa13.89□□□□□ -0.19
COL1A1-202ENST00000463440 ABHD16AO95870 558 aa13.89□□□□□ -0.19
COL1A1-202ENST00000463440 GASTP01350 101 aa13.89□□□□□ -0.19
COL1A1-202ENST00000463440 ZNF23P17027 643 aa13.89□□□□□ -0.19
COL1A1-202ENST00000463440 PPP1CBP62140 327 aa13.89□□□□□ -0.19
COL1A1-202ENST00000463440 PCGF3Q3KNV8 242 aa13.89□□□□□ -0.19
COL1A1-202ENST00000463440 SPATA46Q5T0L3 261 aa13.89□□□□□ -0.19
COL1A1-202ENST00000463440 C6orf52Q5T4I8 152 aa13.89□□□□□ -0.19
COL1A1-202ENST00000463440 MBNL2Q5VZF2 373 aaKnown RBP13.89□□□□□ -0.19
COL1A1-202ENST00000463440 ZNF770Q6IQ21 691 aaPredicted RBP13.89□□□□□ -0.19
COL1A1-202ENST00000463440 RASSF6Q6ZTQ3 369 aa13.89□□□□□ -0.19
COL1A1-202ENST00000463440 RFPL4BQ6ZWI9 263 aa13.89□□□□□ -0.19
COL1A1-202ENST00000463440 VASH1Q7L8A9 365 aaPredicted RBP13.89□□□□□ -0.19
COL1A1-202ENST00000463440 SLC25A40Q8TBP6 338 aa13.89□□□□□ -0.19
COL1A1-202ENST00000463440 RDH5Q92781 318 aa13.89□□□□□ -0.19
COL1A1-202ENST00000463440 MARS2Q96GW9 593 aaKnown RBP13.89□□□□□ -0.19
COL1A1-202ENST00000463440 TSSK2Q96PF2 358 aa13.89□□□□□ -0.19
COL1A1-202ENST00000463440 OR2J1Q9GZK6 312 aa13.89□□□□□ -0.19
COL1A1-202ENST00000463440 RACGAP1Q9H0H5 632 aa13.89□□□□□ -0.19
COL1A1-202ENST00000463440 EGLN3Q9H6Z9 239 aa13.89□□□□□ -0.19
COL1A1-202ENST00000463440 RPRD1BQ9NQG5 326 aaKnown RBP13.89□□□□□ -0.19
COL1A1-202ENST00000463440 B9D1Q9UPM9 204 aa13.89□□□□□ -0.19
COL1A1-202ENST00000463440 U3KQV3 271 aa13.89□□□□□ -0.19
COL1A1-202ENST00000463440 IGLV1-36A0A0B4J1U3 117 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 AQP12BA6NM10 295 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 LYNX1G3V0Z9 82 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 DCTN6O00399 190 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 CRLF1O75462 422 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 HPXP02790 462 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 IGHV4-31P0DP07 118 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 LYNX1P0DP58 116 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 HOXB6P17509 224 aaKnown RBP13.88□□□□□ -0.19
COL1A1-202ENST00000463440 GSTM3P21266 225 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 CHN2P52757 468 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 MRPS11P82912 194 aaKnown RBP13.88□□□□□ -0.19
COL1A1-202ENST00000463440 GLO1Q04760 184 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.88□□□□□ -0.19
COL1A1-202ENST00000463440 PPP1R8Q12972 351 aaKnown RBP13.88□□□□□ -0.19
COL1A1-202ENST00000463440 RIN1Q13671 783 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 GK3PQ14409 553 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 MICAQ29983 383 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 CLEC12AQ5QGZ9 265 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 ELFN2Q5R3F8 820 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 SLC35F1Q5T1Q4 408 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.88□□□□□ -0.19
COL1A1-202ENST00000463440 AQP12AQ8IXF9 295 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 OR6V1Q8N148 313 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 AQP11Q8NBQ7 271 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 NPEPL1Q8NDH3 523 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 SDR9C7Q8NEX9 313 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 OR52E2Q8NGJ4 325 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 KLF14Q8TD94 323 aaPredicted RBP13.88□□□□□ -0.19
COL1A1-202ENST00000463440 CHID1Q9BWS9 393 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 CHODLQ9H9P2 273 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 TBCCD1Q9NVR7 557 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 NKIRAS2Q9NYR9 191 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 IL20Q9NYY1 176 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 ATPIF1Q9UII2 106 aa13.88□□□□□ -0.19
COL1A1-202ENST00000463440 YLPM1P49750 1951 aaKnown RBP13.88□□□□□ -0.19
COL1A1-202ENST00000463440 PLSCR5A0PG75 271 aa13.87□□□□□ -0.19
COL1A1-202ENST00000463440 CST1P01037 141 aa13.87□□□□□ -0.19
COL1A1-202ENST00000463440 NGFP01138 241 aa13.87□□□□□ -0.19
COL1A1-202ENST00000463440 GAAP10253 952 aa13.87□□□□□ -0.19
COL1A1-202ENST00000463440 ACHEP22303 614 aa13.87□□□□□ -0.19
COL1A1-202ENST00000463440 TUBG1P23258 451 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms