RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 PPP1CBP62140 327 aa0.46□□□□□ -2.34
PTPN22-203ENST00000460620 BIKQ13323 160 aa0.46□□□□□ -2.34
PTPN22-203ENST00000460620 PTPN20Q4JDL3 420 aa0.46□□□□□ -2.34
PTPN22-203ENST00000460620 CNSTQ6PJW8 725 aa0.46□□□□□ -2.34
PTPN22-203ENST00000460620 FAM43BQ6ZT52 329 aaPredicted RBP0.46□□□□□ -2.34
PTPN22-203ENST00000460620 TMEM123Q8N131 208 aa0.46□□□□□ -2.34
PTPN22-203ENST00000460620 MFSD9Q8NBP5 474 aa0.46□□□□□ -2.34
PTPN22-203ENST00000460620 RSPH1Q8WYR4 309 aa0.46□□□□□ -2.34
PTPN22-203ENST00000460620 TBRG4Q969Z0 631 aaKnown RBP eCLIP0.46□□□□□ -2.34
PTPN22-203ENST00000460620 TBC1D31Q96DN5 1066 aa0.46□□□□□ -2.34
PTPN22-203ENST00000460620 SLC38A2Q96QD8 506 aa0.46□□□□□ -2.34
PTPN22-203ENST00000460620 SEC22CQ9BRL7 303 aa0.46□□□□□ -2.34
PTPN22-203ENST00000460620 CHCHD7Q9BUK0 85 aa0.46□□□□□ -2.34
PTPN22-203ENST00000460620 PARD6BQ9BYG5 372 aa0.46□□□□□ -2.34
PTPN22-203ENST00000460620 KRT23Q9C075 422 aa0.46□□□□□ -2.34
PTPN22-203ENST00000460620 RAB18Q9NP72 206 aa0.46□□□□□ -2.34
PTPN22-203ENST00000460620 NLE1Q9NVX2 485 aaPredicted RBP0.46□□□□□ -2.34
PTPN22-203ENST00000460620 EPS15L1Q9UBC2 864 aa0.46□□□□□ -2.34
PTPN22-203ENST00000460620 ODF2LQ9ULJ1 636 aa0.46□□□□□ -2.34
PTPN22-203ENST00000460620 YARS2Q9Y2Z4 477 aaKnown RBP0.46□□□□□ -2.34
PTPN22-203ENST00000460620 THADAQ6YHU6 1953 aa0.46□□□□□ -2.34
PTPN22-203ENST00000460620 ATP8B3O60423 1300 aa0.46□□□□□ -2.34
PTPN22-203ENST00000460620 CACNA1DQ01668 2161 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 TSPOAP1O95153 1857 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 MBLAC1A4D2B0 266 aaPredicted RBP0.45□□□□□ -2.34
PTPN22-203ENST00000460620 ARHGEF35A5YM69 484 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 FAM47DPA6NHR8 397 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 CEACAM18A8MTB9 384 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 PRPSAP2O60256 369 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 SLC22A5O76082 557 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 AK1P00568 194 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 IGHV3-11P01762 117 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 IGLV7-43P04211 117 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 MAPK3P27361 379 aaPredicted RBP0.45□□□□□ -2.34
PTPN22-203ENST00000460620 RGS4P49798 205 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 ATP1B3P54709 279 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 CDK5Q00535 292 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 CDC37Q16543 378 aaPredicted RBP0.45□□□□□ -2.34
PTPN22-203ENST00000460620 CCDC92Q53HC0 331 aaPredicted RBP0.45□□□□□ -2.34
PTPN22-203ENST00000460620 YIF1BQ5BJH7 314 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 TTC23Q5W5X9 447 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 PRSS54Q6PEW0 395 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 TRPV1Q8NER1 839 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 DUS3LQ96G46 650 aaKnown RBP0.45□□□□□ -2.34
PTPN22-203ENST00000460620 CNDP1Q96KN2 507 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 FARSBQ9NSD9 589 aaKnown RBP0.45□□□□□ -2.34
PTPN22-203ENST00000460620 SMOXQ9NWM0 555 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 ACTR3BQ9P1U1 418 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 R4GN34 69 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 MAPK8IP3Q9UPT6 1336 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 VWDEQ8N2E2 1590 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 CACNA1GO43497 2377 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 ATP10AO60312 1499 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 IGHV3-49A0A0A0MS15 119 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 TRAV19A0A0A6YYK7 116 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 DYNC1I1O14576 645 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 SOX15O60248 233 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 EIF1BO60739 113 aaKnown RBP0.45□□□□□ -2.34
PTPN22-203ENST00000460620 CNMDO75829 334 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 GUCA1CO95843 209 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 CD3GP09693 182 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 ZNF250P15622 560 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 NCK1P16333 377 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 NTF3P20783 257 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 F2RP25116 425 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 LOXP28300 417 aaPredicted RBP0.45□□□□□ -2.34
PTPN22-203ENST00000460620 CD1CP29017 333 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 EIF1P41567 113 aaKnown RBP0.45□□□□□ -2.34
PTPN22-203ENST00000460620 CBX1P83916 185 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 PYDC2Q56P42 97 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 PCOTHQ58A44 107 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 MED27Q6P2C8 311 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 UQCC3Q6UW78 93 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 LRRC75AQ8NAA5 344 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 LY6G5BQ8NDX9 201 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 OR2T34Q8NGX1 318 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 STMN2Q93045 179 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 CCDC47Q96A33 483 aaKnown RBP0.45□□□□□ -2.34
PTPN22-203ENST00000460620 DTNBP1Q96EV8 351 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 ZFP3Q96NJ6 502 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 RBM14Q96PK6 669 aaKnown RBP0.45□□□□□ -2.34
PTPN22-203ENST00000460620 RBBP8Q99708 897 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 GON7Q9BXV9 100 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 PPA2Q9H2U2 334 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 RWDD1Q9H446 243 aaPredicted RBP0.45□□□□□ -2.34
PTPN22-203ENST00000460620 COQ10BQ9H8M1 238 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 AURKCQ9UQB9 309 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 ZNF337Q9Y3M9 751 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 KIF3AQ9Y496 699 aa0.45□□□□□ -2.34
PTPN22-203ENST00000460620 KIF16BQ96L93 1317 aa0.44□□□□□ -2.34
PTPN22-203ENST00000460620 FLG2Q5D862 2391 aaPredicted RBP0.44□□□□□ -2.34
PTPN22-203ENST00000460620 IGHV3-72A0A0B4J1Y9 119 aa0.44□□□□□ -2.34
PTPN22-203ENST00000460620 F6UB75 175 aa0.44□□□□□ -2.34
PTPN22-203ENST00000460620 CLDN9O95484 217 aa0.44□□□□□ -2.34
PTPN22-203ENST00000460620 PAHP00439 452 aa0.44□□□□□ -2.34
PTPN22-203ENST00000460620 EPB41P11171 864 aaKnown RBP0.44□□□□□ -2.34
PTPN22-203ENST00000460620 KRT13P13646 458 aa0.44□□□□□ -2.34
PTPN22-203ENST00000460620 RAB3AP20336 220 aa0.44□□□□□ -2.34
PTPN22-203ENST00000460620 ATP6V1C1P21283 382 aa0.44□□□□□ -2.34
PTPN22-203ENST00000460620 UBE2HP62256 183 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms