RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 ZNF837Q96EG3 531 aaPredicted RBP9.63□□□□□ -0.87
SMNDC1-203ENST00000460483 RNFT2Q96EX2 444 aa9.63□□□□□ -0.87
SMNDC1-203ENST00000460483 DCLRE1CQ96SD1 692 aaKnown RBP9.63□□□□□ -0.87
SMNDC1-203ENST00000460483 SH3GL3Q99963 347 aa9.63□□□□□ -0.87
SMNDC1-203ENST00000460483 ZNF416Q9BWM5 594 aa9.63□□□□□ -0.87
SMNDC1-203ENST00000460483 YTHDF1Q9BYJ9 559 aaKnown RBP9.63□□□□□ -0.87
SMNDC1-203ENST00000460483 MED20Q9H944 212 aa9.63□□□□□ -0.87
SMNDC1-203ENST00000460483 TUBG2Q9NRH3 451 aa9.63□□□□□ -0.87
SMNDC1-203ENST00000460483 CNOT2Q9NZN8 540 aaKnown RBP9.63□□□□□ -0.87
SMNDC1-203ENST00000460483 DNAJC27Q9NZQ0 273 aa9.63□□□□□ -0.87
SMNDC1-203ENST00000460483 SLC25A15Q9Y619 301 aa9.63□□□□□ -0.87
SMNDC1-203ENST00000460483 COMMD3-BMI1R4GMX3 469 aa9.63□□□□□ -0.87
SMNDC1-203ENST00000460483 SMG1Q96Q15 3661 aaKnown RBP9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 IGKV1D-43A0A0B4J1Z2 117 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 FAM171A2A8MVW0 826 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 J3QW42 95 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 SEC14L2O76054 403 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 IGKV3-15P01624 115 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 HLA-HP01893 362 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 TFP02787 698 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 SBK2P0C263 348 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 CCDC159P0C7I6 412 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 CLUP10909 449 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 SLC2A5P22732 501 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 CRYGSP22914 178 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 HSD11B1P28845 292 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 RGS6P49758 472 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 ACTA2P62736 377 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 ACTG2P63267 376 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 EGR3Q06889 387 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 PIGFQ07326 219 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 CDK5R2Q13319 367 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 RAB35Q15286 201 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 PCK2Q16822 640 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 ELFN2Q5R3F8 820 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 RBM48Q5RL73 367 aaKnown RBP9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 LINC01590Q5TEZ4 76 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 ALKBH2Q6NS38 261 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 SEZ6L2Q6UXD5 910 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 PLEKHG7Q6ZR37 379 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 FAM220AQ7Z4H9 259 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 WFDC8Q8IUA0 241 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 TIGD4Q8IY51 512 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 ACBD7Q8N6N7 88 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 OR51G2Q8NGK0 314 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 OTOSQ8NHW6 89 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 THEM6Q8WUY1 208 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 CNBD2Q96M20 576 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 WFIKKN1Q96NZ8 548 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 COQ7Q99807 217 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 OR2H1Q9GZK4 316 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 ELOVL3Q9HB03 270 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 CDH20Q9HBT6 801 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 PLCXD1Q9NUJ7 323 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 MRPS18AQ9NVS2 196 aaKnown RBP9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 CRNNQ9UBG3 495 aaPredicted RBP9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 FBXO9Q9UK97 447 aaPredicted RBP9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 ESPL1Q14674 2120 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 SVILO95425 2214 aa9.62□□□□□ -0.87
SMNDC1-203ENST00000460483 DAPL1A0PJW8 107 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 TVP23AA6NH52 213 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 ZNF878C9JN71 531 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 DOK2O60496 412 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 FAM20BO75063 409 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 KRT8P05787 483 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 CD3EP07766 207 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 H2BFMP0C1H6 154 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 DBTP11182 482 aaKnown RBP9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 PIPP12273 146 aaPredicted RBP9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 ZNF32P17041 273 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 GABRB1P18505 474 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 STOMP27105 288 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 DCTDP32321 178 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 RAD52P43351 418 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 HTR5AP47898 357 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 TPTEP56180 551 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 SELENOVP59797 346 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 RPS23P62266 143 aaKnown RBP9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 ZNF91Q05481 1191 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 EIF2B1Q14232 305 aaKnown RBP9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 ENDOGQ14249 297 aaKnown RBP9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 DAZAP2Q15038 168 aaPredicted RBP9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 TSC22D1Q15714 1073 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 PABPC1L2AQ5JQF8 200 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 C6orf141Q5SZD1 244 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 SP5Q6BEB4 398 aaPredicted RBP9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 TMPRSS11AQ6ZMR5 421 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 DPY19L4Q7Z388 723 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 DCXRQ7Z4W1 244 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 KRT77Q7Z794 578 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 MDP1Q86V88 176 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 WDFY1Q8IWB7 410 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 SLC35F2Q8IXU6 374 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 STX19Q8N4C7 294 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 WDR31Q8NA23 367 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 ZNF540Q8NDQ6 660 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 SLC30A7Q8NEW0 376 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 BBS1Q8NFJ9 593 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 OR10H4Q8NGA5 316 aa9.61□□□□□ -0.87
SMNDC1-203ENST00000460483 OR4F15Q8NGB8 312 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms