RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 SH3BGRP55822 239 aaPredicted RBP13.57□□□□□ -0.24
SDF4-204ENST00000459994 ATP5J2P56134 94 aa13.57□□□□□ -0.24
SDF4-204ENST00000459994 GLO1Q04760 184 aa13.57□□□□□ -0.24
SDF4-204ENST00000459994 MED21Q13503 144 aa13.57□□□□□ -0.24
SDF4-204ENST00000459994 ETFDHQ16134 617 aa13.57□□□□□ -0.24
SDF4-204ENST00000459994 GABRA6Q16445 453 aa13.57□□□□□ -0.24
SDF4-204ENST00000459994 CEACAM16Q2WEN9 425 aa13.57□□□□□ -0.24
SDF4-204ENST00000459994 NRN1LQ496H8 165 aa13.57□□□□□ -0.24
SDF4-204ENST00000459994 LINC01590Q5TEZ4 76 aa13.57□□□□□ -0.24
SDF4-204ENST00000459994 ZNF627Q7L945 461 aa13.57□□□□□ -0.24
SDF4-204ENST00000459994 BCDIN3DQ7Z5W3 292 aaKnown RBP13.57□□□□□ -0.24
SDF4-204ENST00000459994 GLB1L2Q8IW92 636 aa13.57□□□□□ -0.24
SDF4-204ENST00000459994 WDR31Q8NA23 367 aa13.57□□□□□ -0.24
SDF4-204ENST00000459994 PROKR2Q8NFJ6 384 aa13.57□□□□□ -0.24
SDF4-204ENST00000459994 CNIH3Q8TBE1 160 aa13.57□□□□□ -0.24
SDF4-204ENST00000459994 SMAP2Q8WU79 429 aaPredicted RBP13.57□□□□□ -0.24
SDF4-204ENST00000459994 NSMAFQ92636 917 aa13.57□□□□□ -0.24
SDF4-204ENST00000459994 CNBD2Q96M20 576 aa13.57□□□□□ -0.24
SDF4-204ENST00000459994 TEAD3Q99594 435 aa13.57□□□□□ -0.24
SDF4-204ENST00000459994 HAO2Q9NYQ3 351 aa13.57□□□□□ -0.24
SDF4-204ENST00000459994 DNAJC27Q9NZQ0 273 aa13.57□□□□□ -0.24
SDF4-204ENST00000459994 AASSQ9UDR5 926 aa13.57□□□□□ -0.24
SDF4-204ENST00000459994 WARS2Q9UGM6 360 aaKnown RBP13.57□□□□□ -0.24
SDF4-204ENST00000459994 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.57□□□□□ -0.24
SDF4-204ENST00000459994 COA3Q9Y2R0 106 aaPredicted RBP13.57□□□□□ -0.24
SDF4-204ENST00000459994 NAV3Q8IVL0 2385 aa13.57□□□□□ -0.24
SDF4-204ENST00000459994 ANK3Q12955 4377 aaKnown RBP13.56□□□□□ -0.24
SDF4-204ENST00000459994 CIB4A0PJX0 185 aa13.56□□□□□ -0.24
SDF4-204ENST00000459994 CCDC182A6NF36 153 aa13.56□□□□□ -0.24
SDF4-204ENST00000459994 SLC22A31A6NKX4 558 aa13.56□□□□□ -0.24
SDF4-204ENST00000459994 ZNF99A8MXY4 864 aaPredicted RBP13.56□□□□□ -0.24
SDF4-204ENST00000459994 GYPBP06028 91 aa13.56□□□□□ -0.24
SDF4-204ENST00000459994 HEXAP06865 529 aa13.56□□□□□ -0.24
SDF4-204ENST00000459994 LAP3P28838 519 aa13.56□□□□□ -0.24
SDF4-204ENST00000459994 CDH11P55287 796 aa13.56□□□□□ -0.24
SDF4-204ENST00000459994 CXCR4P61073 352 aa13.56□□□□□ -0.24
SDF4-204ENST00000459994 CSNK2BP67870 215 aa13.56□□□□□ -0.24
SDF4-204ENST00000459994 MRPS34P82930 218 aaKnown RBP13.56□□□□□ -0.24
SDF4-204ENST00000459994 APOFQ13790 326 aa13.56□□□□□ -0.24
SDF4-204ENST00000459994 KCNMB1Q16558 191 aa13.56□□□□□ -0.24
SDF4-204ENST00000459994 KLHL12Q53G59 568 aa13.56□□□□□ -0.24
SDF4-204ENST00000459994 C6orf141Q5SZD1 244 aa13.56□□□□□ -0.24
SDF4-204ENST00000459994 LCN1P1Q5VSP4 162 aa13.56□□□□□ -0.24
SDF4-204ENST00000459994 LAIR2Q6ISS4 152 aa13.56□□□□□ -0.24
SDF4-204ENST00000459994 KRT80Q6KB66 452 aa13.56□□□□□ -0.24
SDF4-204ENST00000459994 B3GLCTQ6Y288 498 aa13.56□□□□□ -0.24
SDF4-204ENST00000459994 MAPK1IP1LQ8NDC0 245 aa13.56□□□□□ -0.24
SDF4-204ENST00000459994 ZNRF4Q8WWF5 429 aa13.56□□□□□ -0.24
SDF4-204ENST00000459994 ZNF837Q96EG3 531 aaPredicted RBP13.56□□□□□ -0.24
SDF4-204ENST00000459994 BOD1Q96IK1 185 aa13.56□□□□□ -0.24
SDF4-204ENST00000459994 RERGLQ9H628 205 aa13.56□□□□□ -0.24
SDF4-204ENST00000459994 MARCH7Q9H992 704 aa13.56□□□□□ -0.24
SDF4-204ENST00000459994 PLCXD1Q9NUJ7 323 aa13.56□□□□□ -0.24
SDF4-204ENST00000459994 TAS2R16Q9NYV7 291 aa13.56□□□□□ -0.24
SDF4-204ENST00000459994 GDF2Q9UK05 429 aaPredicted RBP13.56□□□□□ -0.24
SDF4-204ENST00000459994 CHD3Q12873 2000 aaKnown RBP13.56□□□□□ -0.24
SDF4-204ENST00000459994 ARFGEF3Q5TH69 2177 aa13.55□□□□□ -0.24
SDF4-204ENST00000459994 GAAP10253 952 aa13.55□□□□□ -0.24
SDF4-204ENST00000459994 NPR2P20594 1047 aa13.55□□□□□ -0.24
SDF4-204ENST00000459994 FMO3P31513 532 aa13.55□□□□□ -0.24
SDF4-204ENST00000459994 GUCA1AP43080 201 aaPredicted RBP13.55□□□□□ -0.24
SDF4-204ENST00000459994 RPS7P62081 194 aaKnown RBP13.55□□□□□ -0.24
SDF4-204ENST00000459994 ARF1P84077 181 aaKnown RBP13.55□□□□□ -0.24
SDF4-204ENST00000459994 TGFBR3Q03167 851 aa13.55□□□□□ -0.24
SDF4-204ENST00000459994 HSF2Q03933 536 aa13.55□□□□□ -0.24
SDF4-204ENST00000459994 TNK1Q13470 666 aa13.55□□□□□ -0.24
SDF4-204ENST00000459994 GGTLC2Q14390 218 aa13.55□□□□□ -0.24
SDF4-204ENST00000459994 SLC26A10Q8NG04 563 aa13.55□□□□□ -0.24
SDF4-204ENST00000459994 OR51L1Q8NGJ5 315 aa13.55□□□□□ -0.24
SDF4-204ENST00000459994 MUCL1Q96DR8 90 aa13.55□□□□□ -0.24
SDF4-204ENST00000459994 FOXB1Q99853 325 aa13.55□□□□□ -0.24
SDF4-204ENST00000459994 TRAF4Q9BUZ4 470 aaPredicted RBP13.55□□□□□ -0.24
SDF4-204ENST00000459994 CXorf56Q9H5V9 222 aa13.55□□□□□ -0.24
SDF4-204ENST00000459994 SIAEQ9HAT2 523 aa13.55□□□□□ -0.24
SDF4-204ENST00000459994 NGBQ9NPG2 151 aa13.55□□□□□ -0.24
SDF4-204ENST00000459994 POLE4Q9NR33 117 aa13.55□□□□□ -0.24
SDF4-204ENST00000459994 TMEM38BQ9NVV0 291 aa13.55□□□□□ -0.24
SDF4-204ENST00000459994 UBAP1Q9NZ09 502 aa13.55□□□□□ -0.24
SDF4-204ENST00000459994 CISD1Q9NZ45 108 aaKnown RBP13.55□□□□□ -0.24
SDF4-204ENST00000459994 LRCH1Q9Y2L9 728 aa13.55□□□□□ -0.24
SDF4-204ENST00000459994 RPL36Q9Y3U8 105 aaKnown RBP13.55□□□□□ -0.24
SDF4-204ENST00000459994 FAM171A2A8MVW0 826 aa13.54□□□□□ -0.24
SDF4-204ENST00000459994 E7EQL1 145 aa13.54□□□□□ -0.24
SDF4-204ENST00000459994 IGHV4-39P01824 125 aa13.54□□□□□ -0.24
SDF4-204ENST00000459994 GSTT1P30711 240 aa13.54□□□□□ -0.24
SDF4-204ENST00000459994 KRTAP1-1Q07627 177 aa13.54□□□□□ -0.24
SDF4-204ENST00000459994 DBPQ10586 325 aaPredicted RBP13.54□□□□□ -0.24
SDF4-204ENST00000459994 SMN1Q16637 294 aaKnown RBP13.54□□□□□ -0.24
SDF4-204ENST00000459994 KRTAP21-3Q3LHN1 58 aa13.54□□□□□ -0.24
SDF4-204ENST00000459994 FAM27BQ5VT28 67 aa13.54□□□□□ -0.24
SDF4-204ENST00000459994 PIAS4Q8N2W9 510 aaPredicted RBP13.54□□□□□ -0.24
SDF4-204ENST00000459994 ZNF511Q8NB15 262 aa13.54□□□□□ -0.24
SDF4-204ENST00000459994 C1orf162Q8NEQ5 155 aaPredicted RBP13.54□□□□□ -0.24
SDF4-204ENST00000459994 OR6K6Q8NGW6 343 aa13.54□□□□□ -0.24
SDF4-204ENST00000459994 MRPS18AQ9NVS2 196 aaKnown RBP13.54□□□□□ -0.24
SDF4-204ENST00000459994 KCNG2Q9UJ96 466 aa13.54□□□□□ -0.24
SDF4-204ENST00000459994 A0A1W2PPL8 197 aa13.53□□□□□ -0.24
SDF4-204ENST00000459994 M0R1B8 84 aa13.53□□□□□ -0.24
SDF4-204ENST00000459994 TFP02787 698 aa13.53□□□□□ -0.24
SDF4-204ENST00000459994 CCDC159P0C7I6 412 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms