RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 DPY19L4Q7Z388 723 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 KRT77Q7Z794 578 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 LSRQ86X29 649 aaPredicted RBP7.93□□□□□ -1.14
VPS50-207ENST00000458530 GPR137CQ8N3F9 429 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 OR2AJ1Q8NGZ0 328 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 OR52N5Q8NH56 324 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 DYNC2LI1Q8TCX1 351 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 THEM6Q8WUY1 208 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 PHYHIPQ92561 330 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 RPL3LQ92901 407 aaKnown RBP7.93□□□□□ -1.14
VPS50-207ENST00000458530 TMEM54Q969K7 222 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 SMIM19Q96E16 107 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 PELI1Q96FA3 418 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 OR2M2Q96R28 347 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 UCN2Q96RP3 112 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 EMC6Q9BV81 110 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 ULBP2Q9BZM5 246 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 COMMD4Q9H0A8 199 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 ISG20L2Q9H9L3 353 aaKnown RBP7.93□□□□□ -1.14
VPS50-207ENST00000458530 RNF122Q9H9V4 155 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 GP6Q9HCN6 339 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 COPS3Q9UNS2 423 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 ZNF175Q9Y473 711 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 FLVCR1Q9Y5Y0 555 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 ALPK2Q86TB3 2170 aa7.93□□□□□ -1.14
VPS50-207ENST00000458530 TRBV2A0A0J9YWF9 115 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 PNMA8CA0A1B0GUJ8 204 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 TMEM212A6NML5 194 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 ZNF724A8MTY0 619 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 GPX5O75715 221 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 GATBO75879 557 aaKnown RBP7.92□□□□□ -1.14
VPS50-207ENST00000458530 ARL6IP5O75915 188 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 IL1AP01583 271 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 CRYABP02511 175 aaKnown RBP7.92□□□□□ -1.14
VPS50-207ENST00000458530 CELA3AP09093 270 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 QDPRP09417 244 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 CPN1P15169 458 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 MSR1P21757 451 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 MAPK3P27361 379 aaPredicted RBP7.92□□□□□ -1.14
VPS50-207ENST00000458530 COL8A1P27658 744 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 PCSK6P29122 969 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 CD79BP40259 229 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 CRYBB2P43320 205 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 GDI2P50395 445 aaKnown RBP7.92□□□□□ -1.14
VPS50-207ENST00000458530 LSM6P62312 80 aaKnown RBP7.92□□□□□ -1.14
VPS50-207ENST00000458530 RPS25P62851 125 aaKnown RBP7.92□□□□□ -1.14
VPS50-207ENST00000458530 ROM1Q03395 351 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 SRYQ05066 204 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 FMODQ06828 376 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 DYNC1I2Q13409 638 aaKnown RBP7.92□□□□□ -1.14
VPS50-207ENST00000458530 STK11Q15831 433 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 KCNMB1Q16558 191 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 PCK2Q16822 640 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 ZNF829Q3KNS6 432 aaPredicted RBP7.92□□□□□ -1.14
VPS50-207ENST00000458530 RIPPLY2Q5TAB7 128 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 CARD17Q5XLA6 110 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 DMKNQ6E0U4 476 aaPredicted RBP7.92□□□□□ -1.14
VPS50-207ENST00000458530 RHOUQ7L0Q8 258 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 SSX6Q7RTT6 188 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 ABHD12BQ7Z5M8 362 aaPredicted RBP7.92□□□□□ -1.14
VPS50-207ENST00000458530 C20orf196Q8IYI0 205 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 ZNF679Q8IYX0 411 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 TMEM123Q8N131 208 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 ZFP41Q8N8Y5 198 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 TEX19Q8NA77 164 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 NDNFQ8TB73 568 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 CPT1CQ8TCG5 803 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 RNF128Q8TEB7 428 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 ZNRF4Q8WWF5 429 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 S100ZQ8WXG8 99 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 AP3S1Q92572 193 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 NSMAFQ92636 917 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 MCHR2Q969V1 340 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 SARAFQ96BY9 339 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 OR8B4Q96RC9 309 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 CENPOQ9BU64 300 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 MED18Q9BUE0 208 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 TMED9Q9BVK6 235 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 C1orf198Q9H425 327 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 NIPAL2Q9H841 368 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 SEC61A2Q9H9S3 476 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 ACOXLQ9NUZ1 547 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 MRPL22Q9NWU5 206 aaKnown RBP7.92□□□□□ -1.14
VPS50-207ENST00000458530 TXNL4BQ9NX01 149 aaKnown RBP7.92□□□□□ -1.14
VPS50-207ENST00000458530 GALNT8Q9NY28 637 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 CRNNQ9UBG3 495 aaPredicted RBP7.92□□□□□ -1.14
VPS50-207ENST00000458530 SF3B6Q9Y3B4 125 aaKnown RBP7.92□□□□□ -1.14
VPS50-207ENST00000458530 CELSR1Q9NYQ6 3014 aa7.92□□□□□ -1.14
VPS50-207ENST00000458530 PHF3Q92576 2039 aaKnown RBP7.91□□□□□ -1.14
VPS50-207ENST00000458530 CACNA1CQ13936 2221 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 CCDC168Q8NDH2 2452 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 A1L4Q6 167 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 ZNF716A6NP11 495 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 ZNF879B4DU55 563 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 GABRPO00591 440 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 AQP7O14520 342 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 DHHO43323 396 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 RAMP1O60894 148 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 KRT33AO76009 404 aa7.91□□□□□ -1.14
VPS50-207ENST00000458530 LALBAP00709 142 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms