RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 RNF222A6NCQ9 220 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 MYMKA6NI61 221 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 FTCDNL1E5RQL4 147 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 F5H5T6 163 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 TRAPPC2LH3BP13 241 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 I3L521 148 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 K7ERU9 68 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 RGS14O43566 566 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 SSNA1O43805 119 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 PDE6DO43924 150 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 SPAG7O75391 227 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 S1PR2O95136 353 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 CLDN9O95484 217 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 IFNA17P01571 189 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 HLA-AP01891 365 aaKnown RBP4.79□□□□□ -1.64
VPS41-209ENST00000457055 BCHEP06276 602 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 RHOCP08134 193 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 CST2P09228 141 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 NPSP0C0P6 89 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 OR8U8P0C7N1 319 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 ATXN1LP0C7T5 689 aaKnown RBP4.79□□□□□ -1.64
VPS41-209ENST00000457055 DANCRP0C864 163 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 IMPDH1P20839 514 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 GCSHP23434 173 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 OMGP23515 440 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 PSMA1P25786 263 aaKnown RBP4.79□□□□□ -1.64
VPS41-209ENST00000457055 S100A7P31151 101 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 IFNGR2P38484 337 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 OR3A1P47881 315 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 CDX1P47902 265 aaPredicted RBP4.79□□□□□ -1.64
VPS41-209ENST00000457055 NOVA1P51513 510 aaKnown RBP4.79□□□□□ -1.64
VPS41-209ENST00000457055 RHOAP61586 193 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 HSF1Q00613 529 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 KLRC3Q07444 240 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 C2orf80Q0P641 193 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 BTN1A1Q13410 526 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 KIAA0141Q14154 515 aaPredicted RBP4.79□□□□□ -1.64
VPS41-209ENST00000457055 OXA1LQ15070 435 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 TAB1Q15750 504 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 ACSBG2Q5FVE4 666 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 SMARCD3Q6STE5 483 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 BTNL8Q6UX41 500 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 PLXDC2Q6UX71 529 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 QSOX2Q6ZRP7 698 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 PIWIL4Q7Z3Z4 852 aaKnown RBP4.79□□□□□ -1.64
VPS41-209ENST00000457055 TMPRSS11BQ86T26 416 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 COMMD7Q86VX2 200 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 KCNMB4Q86W47 210 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 PARGQ86W56 976 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 TMEM25Q86YD3 366 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 APRG1Q8IVJ8 170 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 UEVLDQ8IX04 471 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 SLC34A3Q8N130 599 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 SLC35F6Q8N357 371 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 C12orf45Q8N5I9 185 aaPredicted RBP4.79□□□□□ -1.64
VPS41-209ENST00000457055 METTL13Q8N6R0 699 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 C4orf32Q8N8J7 132 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 GDPD1Q8N9F7 314 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 OR8U1Q8NH10 309 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 CCDC107Q8WV48 283 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 RORBQ92753 470 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 APH1AQ96BI3 265 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 MOB3AQ96BX8 217 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 CTHRC1Q96CG8 243 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 ITCHQ96J02 903 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 C12orf42Q96LP6 360 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 OR2M2Q96R28 347 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 OR8B4Q96RC9 309 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 ZNF382Q96SR6 550 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 C1QTNF5Q9BXJ0 243 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 AMBRA1Q9C0C7 1298 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 ARL6Q9H0F7 186 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 ALG9Q9H6U8 611 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 SLC28A3Q9HAS3 691 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 GPR35Q9HC97 309 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 MRPL17Q9NRX2 175 aaKnown RBP4.79□□□□□ -1.64
VPS41-209ENST00000457055 FOXJ2Q9P0K8 574 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 ING4Q9UNL4 249 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 C14orf166Q9Y224 244 aaKnown RBP4.79□□□□□ -1.64
VPS41-209ENST00000457055 SLC6A5Q9Y345 797 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 FAM96BQ9Y3D0 163 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 MTCH2Q9Y6C9 303 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 KIF20BQ96Q89 1820 aa4.79□□□□□ -1.64
VPS41-209ENST00000457055 PIEZO1Q92508 2521 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 C1orf226A1L170 272 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 ISPDA4D126 451 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 RNF212BA8MTL3 300 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 MPTX1A8MV57 137 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 KRBOX1C9JBD0 128 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 ANKRD63C9JTQ0 380 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 GPR31O00270 319 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 CLIC1O00299 241 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 SLC17A3O00476 420 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 TNFSF11O14788 317 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 MSI1O43347 362 aaKnown RBP4.78□□□□□ -1.64
VPS41-209ENST00000457055 SCO1O75880 301 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 C1QL1O75973 258 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 HLA-HP01893 362 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 C8orf88P0DMB2 117 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 ZNF35P13682 527 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms