RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 TVP23BQ9NYZ1 205 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 H2AFY2Q9P0M6 372 aaPredicted RBP7.58□□□□□ -1.2
COL28A1-205ENST00000453441 NDRG4Q9ULP0 352 aaKnown RBP7.58□□□□□ -1.2
COL28A1-205ENST00000453441 COA3Q9Y2R0 106 aaPredicted RBP7.58□□□□□ -1.2
COL28A1-205ENST00000453441 POLR1DQ9Y2S0 133 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 SPEF1Q9Y4P9 236 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 PRR14LQ5THK1 2151 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 PLCE1Q9P212 2302 aa7.58□□□□□ -1.2
COL28A1-205ENST00000453441 UTP20O75691 2785 aaKnown RBP7.58□□□□□ -1.2
COL28A1-205ENST00000453441 SLC22A31A6NKX4 558 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 VSTM5A8MXK1 200 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 M0R1B8 84 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 SLC16A6O15403 523 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 SNAP29O95721 258 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 HLA-DQA2P01906 255 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 CDAP32320 146 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 GGT2P36268 569 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 IDH3GP51553 393 aaPredicted RBP7.57□□□□□ -1.2
COL28A1-205ENST00000453441 EFNB1P98172 346 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 TEKQ02763 1124 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 BSPH1Q075Z2 132 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 ECH1Q13011 328 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 IL18R1Q13478 541 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 SNTB1Q13884 538 aaKnown RBP7.57□□□□□ -1.2
COL28A1-205ENST00000453441 ENDOGQ14249 297 aaKnown RBP7.57□□□□□ -1.2
COL28A1-205ENST00000453441 ETFDHQ16134 617 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 TBC1D28Q2M2D7 210 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 TEX30Q5JUR7 227 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 SLC25A30Q5SVS4 291 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 MEDAGQ5VYS4 303 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 TTC23Q5W5X9 447 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 PLBD1Q6P4A8 553 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 ARL9Q6T311 187 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 ZNF704Q6ZNC4 412 aaPredicted RBP7.57□□□□□ -1.2
COL28A1-205ENST00000453441 C22orf34Q6ZV56 151 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 RHOUQ7L0Q8 258 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 SHFQ7M4L6 423 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 TMEM200AQ86VY9 491 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 OR2AJ1Q8NGZ0 328 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 C11orf40Q8WZ69 217 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 RFKQ969G6 155 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 DCLRE1CQ96SD1 692 aaKnown RBP7.57□□□□□ -1.2
COL28A1-205ENST00000453441 MNTQ99583 582 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 SH3GL3Q99963 347 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 ZNF416Q9BWM5 594 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 CDADC1Q9BWV3 514 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 OR2H1Q9GZK4 316 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 HDHD2Q9H0R4 259 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 MARCH7Q9H992 704 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 FAIMQ9NVQ4 179 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 ZNF224Q9NZL3 707 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 NPAP1Q9NZP6 1156 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 FBXO9Q9UK97 447 aaPredicted RBP7.57□□□□□ -1.2
COL28A1-205ENST00000453441 GMPPBQ9Y5P6 360 aa7.57□□□□□ -1.2
COL28A1-205ENST00000453441 ROS1P08922 2347 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 ABCA12Q86UK0 2595 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 IGHV1-18A0A0C4DH31 117 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 A0A1W2PR80 420 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 DPRXA6NFQ7 191 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 E9PQ18 207 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 H0YAE9 185 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 DCTN6O00399 190 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 ABCD4O14678 606 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 SGCEO43556 437 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 TLX2O43763 284 aaPredicted RBP7.56□□□□□ -1.2
COL28A1-205ENST00000453441 CECR9P0C854 216 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 ZNF14P17017 642 aaPredicted RBP7.56□□□□□ -1.2
COL28A1-205ENST00000453441 ZNF32P17041 273 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 TUBG1P23258 451 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 LOXP28300 417 aaPredicted RBP7.56□□□□□ -1.2
COL28A1-205ENST00000453441 PEX2P28328 305 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 PCSK6P29122 969 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 GSTT1P30711 240 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 APLNRP35414 380 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 ENTPD1P49961 510 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 RPS23P62266 143 aaKnown RBP7.56□□□□□ -1.2
COL28A1-205ENST00000453441 SNRPGP62308 76 aaKnown RBP7.56□□□□□ -1.2
COL28A1-205ENST00000453441 HIST1H3AP68431 136 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 ADAM8P78325 824 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 GALK2Q01415 458 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 NAAAQ02083 359 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 GGTLC2Q14390 218 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 RAB35Q15286 201 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 PCK2Q16822 640 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 PABPC1L2AQ5JQF8 200 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 HIST2H3PS2Q5TEC6 136 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 LINC01590Q5TEZ4 76 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 TMEM236Q5W0B7 351 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 LPCAT4Q643R3 524 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 ZNF544Q6NX49 715 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 HIST2H3AQ71DI3 136 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 CPOQ8IVL8 374 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 LRRC18Q8N456 261 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 TCEANCQ8N8B7 351 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 SETD9Q8NE22 299 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 SLC30A7Q8NEW0 376 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 NUP37Q8NFH4 326 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 OR9Q1Q8NGQ5 310 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 OR6K6Q8NGW6 343 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 PTP4A1Q93096 173 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms