RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 MPV17P39210 176 aa13.03□□□□□ -0.32
CHD3-205ENST00000449744 HTR5AP47898 357 aa13.03□□□□□ -0.32
CHD3-205ENST00000449744 MBNL2Q5VZF2 373 aaKnown RBP13.03□□□□□ -0.32
CHD3-205ENST00000449744 THSD4Q6ZMP0 1018 aa13.03□□□□□ -0.32
CHD3-205ENST00000449744 DPY19L2P2Q6ZN68 376 aa13.03□□□□□ -0.32
CHD3-205ENST00000449744 RFPL4BQ6ZWI9 263 aa13.03□□□□□ -0.32
CHD3-205ENST00000449744 USP51Q70EK9 711 aa13.03□□□□□ -0.32
CHD3-205ENST00000449744 ADCK1Q86TW2 530 aa13.03□□□□□ -0.32
CHD3-205ENST00000449744 KLF14Q8TD94 323 aaPredicted RBP13.03□□□□□ -0.32
CHD3-205ENST00000449744 IPCEF1Q8WWN9 437 aaPredicted RBP13.03□□□□□ -0.32
CHD3-205ENST00000449744 DHRS1Q96LJ7 313 aa13.03□□□□□ -0.32
CHD3-205ENST00000449744 SAP30LQ9HAJ7 183 aa13.03□□□□□ -0.32
CHD3-205ENST00000449744 CYSLTR2Q9NS75 346 aa13.03□□□□□ -0.32
CHD3-205ENST00000449744 ARL8BQ9NVJ2 186 aa13.03□□□□□ -0.32
CHD3-205ENST00000449744 PLEK2Q9NYT0 353 aa13.03□□□□□ -0.32
CHD3-205ENST00000449744 TMEFF2Q9UIK5 374 aaPredicted RBP13.03□□□□□ -0.32
CHD3-205ENST00000449744 COA3Q9Y2R0 106 aaPredicted RBP13.03□□□□□ -0.32
CHD3-205ENST00000449744 IGHV1-69-2A0A0G2JMI3 117 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 H3BSA7 217 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 ARPC2O15144 300 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 PHF1O43189 567 aaPredicted RBP13.02□□□□□ -0.33
CHD3-205ENST00000449744 SGCEO43556 437 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 OR10H3O60404 316 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 NGFP01138 241 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 TFP02787 698 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 FABP3P05413 133 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 SRP14P37108 136 aaKnown RBP13.02□□□□□ -0.33
CHD3-205ENST00000449744 IFNGR2P38484 337 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 LIPAP38571 399 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 CRYBB2P43320 205 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 CENPAP49450 140 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 DVL1P1P54792 670 aaPredicted RBP13.02□□□□□ -0.33
CHD3-205ENST00000449744 AQP6Q13520 282 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 HFEQ30201 348 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 FAM209AQ5JX71 171 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 DNM1P34Q6PK57 102 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 SMARCD3Q6STE5 483 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 PIGWQ7Z7B1 504 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 GLCCI1Q86VQ1 547 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 GLB1L2Q8IW92 636 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 DEFB107AQ8IZN7 70 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 GTF3AQ92664 365 aaKnown RBP13.02□□□□□ -0.33
CHD3-205ENST00000449744 ELMOD3Q96FG2 381 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 C1orf159Q96HA4 380 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 ERMAPQ96PL5 475 aaPredicted RBP13.02□□□□□ -0.33
CHD3-205ENST00000449744 TREM2Q9NZC2 230 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 VSX1Q9NZR4 365 aaPredicted RBP13.02□□□□□ -0.33
CHD3-205ENST00000449744 CGGBP1Q9UFW8 167 aaPredicted RBP13.02□□□□□ -0.33
CHD3-205ENST00000449744 CD300AQ9UGN4 299 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 TMCC3Q9ULS5 477 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 POLR1DQ9Y2S0 133 aa13.02□□□□□ -0.33
CHD3-205ENST00000449744 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.02□□□□□ -0.335e-6■□□□□ 9.9
CHD3-205ENST00000449744 CLDN25C9JDP6 229 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 TIMM8AO60220 97 aaPredicted RBP13.01□□□□□ -0.33
CHD3-205ENST00000449744 ICMTO60725 284 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 PPP1R3DO95685 299 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 TXNDC12O95881 172 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 IGHV1-46P01743 117 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 SEMG1P04279 462 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 GSTM3P21266 225 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 CRABP1P29762 137 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 SLC6A6P31641 620 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 THBS2P35442 1172 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 MMP15P51511 669 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 MNAT1P51948 309 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 LSM6P62312 80 aaKnown RBP13.01□□□□□ -0.33
CHD3-205ENST00000449744 MVKQ03426 396 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 SPATS1Q496A3 300 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 ZMAT1Q5H9K5 638 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 AVPI1Q5T686 147 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 ZER1Q7Z7L7 766 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 JAZF1Q86VZ6 243 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 NPEPL1Q8NDH3 523 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 FANK1Q8TC84 345 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 TIMD4Q96H15 378 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 FUZQ9BT04 418 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 EGLN1Q9GZT9 426 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 NUAK2Q9H093 628 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 RACGAP1Q9H0H5 632 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 LPAR2Q9HBW0 351 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 TBCCD1Q9NVR7 557 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 ASH2LQ9UBL3 628 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 STAB1Q9NY15 2570 aa13.01□□□□□ -0.33
CHD3-205ENST00000449744 IMPA2O14732 288 aa13□□□□□ -0.33
CHD3-205ENST00000449744 MPZL1O95297 269 aa13□□□□□ -0.33
CHD3-205ENST00000449744 RENP00797 406 aa13□□□□□ -0.33
CHD3-205ENST00000449744 TUBG1P23258 451 aa13□□□□□ -0.33
CHD3-205ENST00000449744 RRM2P31350 389 aa13□□□□□ -0.33
CHD3-205ENST00000449744 CDKN2AP42771 156 aaKnown RBP13□□□□□ -0.33
CHD3-205ENST00000449744 FXYD6P3P58550 94 aa13□□□□□ -0.33
CHD3-205ENST00000449744 RFX4Q33E94 735 aa13□□□□□ -0.33
CHD3-205ENST00000449744 OTPQ5XKR4 325 aa13□□□□□ -0.33
CHD3-205ENST00000449744 PGM2L1Q6PCE3 622 aa13□□□□□ -0.33
CHD3-205ENST00000449744 PTCHD4Q6ZW05 846 aa13□□□□□ -0.33
CHD3-205ENST00000449744 VASH1Q7L8A9 365 aaPredicted RBP13□□□□□ -0.33
CHD3-205ENST00000449744 ZDHHC21Q8IVQ6 265 aa13□□□□□ -0.33
CHD3-205ENST00000449744 RAB1CQ92928 201 aa13□□□□□ -0.33
CHD3-205ENST00000449744 COG8Q96MW5 612 aa13□□□□□ -0.33
CHD3-205ENST00000449744 DIRC2Q96SL1 478 aa13□□□□□ -0.33
CHD3-205ENST00000449744 GPA33Q99795 319 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms