RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 NEURL3Q96EH8 262 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 FOXN4Q96NZ1 517 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF317Q96PQ6 595 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 POTEKPQ9BYX7 375 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 NKX1-2Q9UD57 310 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 GNG8Q9UK08 70 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 RPL36Q9Y3U8 105 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 TRIM64CA6NLI5 447 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 UPK1AO00322 258 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 T-ENOLP0DO92 83 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 LCN2P80188 198 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 TMEM267Q0VDI3 215 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 PIN1Q13526 163 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 GINS1Q14691 196 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 RNF151Q2KHN1 245 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF770Q6IQ21 691 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 EPGNQ6UW88 154 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 C19orf35Q6ZS72 473 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 MUC20Q8N307 709 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 GTPBP8Q8N3Z3 284 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 UBAC2Q8NBM4 344 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 WDR20Q8TBZ3 569 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 KTI12Q96EK9 354 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 BARD1Q99728 777 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 EMC6Q9BV81 110 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 CCDC106Q9BWC9 280 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 SLC5A7Q9GZV3 580 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 HIF1ANQ9NWT6 349 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 MRPS7Q9Y2R9 242 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 AUP1Q9Y679 476 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 A0A0A6YYD5 115 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 SNX3O60493 162 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 SEMA7AO75326 666 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 SOX14O95416 240 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 CLPTM1O96005 669 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 C1QAP02745 245 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF728P0DKX0 622 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 TDGF1P13385 188 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF45Q02386 682 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF846Q147U1 533 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 TMEM99Q8N816 258 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 FOXB1Q99853 325 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 EBF4Q9BQW3 602 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 RTL8AQ9BWD3 113 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 SLC22A11Q9NSA0 550 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 GNG13Q9P2W3 67 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 RNF150Q9ULK6 438 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 ENPP4Q9Y6X5 453 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 C3orf80F5H4A9 247 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 XRCC2O43543 280 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 APOBEC3AP31941 199 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 LIPAP38571 399 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 CDONQ4KMG0 1287 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 CXorf66Q5JRM2 361 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF613Q6PF04 617 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 PAQR6Q6TCH4 344 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 SKA3Q8IX90 412 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 SVOPLQ8N434 492 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 BPIFB6Q8NFQ5 453 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 STK35Q8TDR2 534 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 TRAPPC2LQ9UL33 140 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 TNCP24821 2201 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF879B4DU55 563 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 EREGO14944 169 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 UBOX5O94941 541 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 HTR3BO95264 441 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 B4GALT1P15291 398 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 F8A1P23610 371 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 MAP2K3P46734 347 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 CD97P48960 835 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 ACTC1P68032 377 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 ACTA1P68133 377 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZBED5Q49AG3 693 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 VASNQ6EMK4 673 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 MOB1BQ7L9L4 216 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 VTCN1Q7Z7D3 282 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 PRRC1Q96M27 445 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 C7orf50Q9BRJ6 194 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 HDHD2Q9H0R4 259 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 NIPAL2Q9H841 368 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 DLL4Q9NR61 685 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF629Q9UEG4 869 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 ASB4Q9Y574 426 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 PNMA8CA0A1B0GUJ8 204 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 SYT5O00445 386 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 SYT7O43581 403 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 GNB3P16520 340 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 AQP2P41181 271 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 RIPPLY2Q5TAB7 128 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 MRPL14Q6P1L8 145 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 PET117Q6UWS5 81 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 AMIGO2Q86SJ2 522 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 TUSC5Q8IXB3 177 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR13G1Q8NGZ3 307 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 C1GALT1C1Q96EU7 318 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 IL4I1Q96RQ9 567 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 INTS14Q96SY0 518 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 MOB1AQ9H8S9 216 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 EP400Q96L91 3159 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 PLXNA4Q9HCM2 1894 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms