RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 MGAT4AQ9UM21 535 aa13.22□□□□□ -0.29
SF1-211ENST00000448404 DMXL1Q9Y485 3027 aa13.22□□□□□ -0.29
SF1-211ENST00000448404 ANKUB1A6NFN9 424 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 TMEM212A6NML5 194 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 PITPNAQ00169 270 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 ZNF468Q5VIY5 522 aaPredicted RBP13.21□□□□□ -0.29
SF1-211ENST00000448404 H1FNTQ75WM6 255 aaPredicted RBP13.21□□□□□ -0.29
SF1-211ENST00000448404 KCTD20Q7Z5Y7 419 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 KMT5CQ86Y97 462 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 LIX1LQ8IVB5 337 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 ZNF248Q8NDW4 579 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 OR1J4Q8NGS1 313 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 RNF128Q8TEB7 428 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 FCAMRQ8WWV6 532 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 HAVCR1Q96D42 359 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 SLC25A44Q96H78 314 aaPredicted RBP13.21□□□□□ -0.29
SF1-211ENST00000448404 DEFB126Q9BYW3 111 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 ZFP64Q9NPA5 681 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 CA10Q9NS85 328 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 MRPL39Q9NYK5 338 aaKnown RBP13.21□□□□□ -0.29
SF1-211ENST00000448404 VSX1Q9NZR4 365 aaPredicted RBP13.21□□□□□ -0.29
SF1-211ENST00000448404 DHDHQ9UQ10 334 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 PTRH2Q9Y3E5 179 aaKnown RBP13.21□□□□□ -0.29
SF1-211ENST00000448404 NCOA6Q14686 2063 aaPredicted RBP13.21□□□□□ -0.29
SF1-211ENST00000448404 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 TMEM269A0A1B0GVZ9 245 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 LOC107986453A0A1B0GWG9 222 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 OR6C76A6NM76 312 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 TRIM77I1YAP6 450 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 SIX6O95475 246 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 CSN2P05814 226 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 ZNF823P16415 610 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 CSRP1P21291 193 aaKnown RBP13.21□□□□□ -0.29
SF1-211ENST00000448404 STOMP27105 288 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 RIDAP52758 137 aaKnown RBP13.21□□□□□ -0.29
SF1-211ENST00000448404 TMEM225Q6GV28 225 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 NUP54Q7Z3B4 507 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 CDH24Q86UP0 819 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 WDSUB1Q8N9V3 476 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 OR52N5Q8NH56 324 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 OR56B4Q8NH76 319 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 C11orf40Q8WZ69 217 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 MIB2Q96AX9 1013 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 MICU1Q9BPX6 476 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 NIPAL2Q9H841 368 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 KLHL9Q9P2J3 617 aa13.21□□□□□ -0.29
SF1-211ENST00000448404 EIF3KQ9UBQ5 218 aaKnown RBP13.21□□□□□ -0.29
SF1-211ENST00000448404 LIPT2A6NK58 231 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 VSTM2BA6NLU5 285 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 GPR171O14626 319 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 TPPPO94811 219 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 IGF2P01344 180 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 LIPCP11150 499 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 PLPPR5Q32ZL2 321 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 PCGF3Q3KNV8 242 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 CFAP77Q6ZQR2 320 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 TMEM234Q8WY98 164 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 FAM3DQ96BQ1 224 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 ATG5Q9H1Y0 275 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 B3GNT2Q9NY97 397 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 NUBP2Q9Y5Y2 271 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 TMEM14AQ9Y6G1 99 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 PCP4L1A6NKN8 68 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 ATP6V1G2-DDX39BF2Z307 99 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 H3BUI4 141 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 ZNHIT1O43257 154 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 CTAG2O75638 210 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 ZNF41P51814 821 aaPredicted RBP13.2□□□□□ -0.3
SF1-211ENST00000448404 POU4F3Q15319 338 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 NHLRC1Q6VVB1 395 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 ZNF627Q7L945 461 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 PIAS4Q8N2W9 510 aaPredicted RBP13.2□□□□□ -0.3
SF1-211ENST00000448404 OR10S1Q8NGN2 331 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 OR13C3Q8NGS6 347 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 ST7LQ8TDW4 575 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 EDAQ92838 391 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 KCNK17Q96T54 332 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 CMKLR1Q99788 373 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 METTL17Q9H7H0 456 aaPredicted RBP13.2□□□□□ -0.3
SF1-211ENST00000448404 PTGES2Q9H7Z7 377 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 CHST11Q9NPF2 352 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 STEAP1Q9UHE8 339 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 LOC100509620A0A075B734 347 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 GABARAPH6UMI1 98 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 CAPZA2P47755 286 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 SLC22A6Q4U2R8 563 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 TRIM61Q5EBN2 209 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 ZBTB37Q5TC79 503 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 AIFM2Q9BRQ8 373 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 ZNF224Q9NZL3 707 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 WIF1Q9Y5W5 379 aa13.2□□□□□ -0.3
SF1-211ENST00000448404 TMEM272A0A1B0GTI8 110 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 C7orf66A4D0T2 115 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 OR2T1O43869 369 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 ZFAND5O76080 213 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 UMODP07911 640 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 CCL3P10147 92 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 C2orf68Q2NKX9 166 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 TIGD3Q6B0B8 471 aa13.19□□□□□ -0.3
SF1-211ENST00000448404 FAM198BQ6UWH4 519 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms