RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 BCL2L2Q92843 193 aaPredicted RBP17.11■□□□□ 0.33
SGCE-207ENST00000447873 FBXO17Q96EF6 278 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 AMELYQ99218 206 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 GALNT8Q9NY28 637 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 COQ3Q9NZJ6 369 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 CAB39Q9Y376 341 aaPredicted RBP17.11■□□□□ 0.33
SGCE-207ENST00000447873 RER1O15258 196 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 CAPZA2P47755 286 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 EGR3Q06889 387 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 MED22Q15528 200 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 SLC36A2Q495M3 483 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 HIKESHIQ53FT3 197 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 SFRP5Q5T4F7 317 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 OR2G6Q5TZ20 316 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 OR7E24Q6IFN5 339 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 MTFR2Q6P444 385 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 SPATC1Q76KD6 591 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 RELL2Q8NC24 303 aaPredicted RBP17.11■□□□□ 0.33
SGCE-207ENST00000447873 OR52N5Q8NH56 324 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 MAP6Q96JE9 813 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 WACQ9BTA9 647 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 IKZF2Q9UKS7 526 aa17.11■□□□□ 0.33
SGCE-207ENST00000447873 PSMD9O00233 223 aa17.1■□□□□ 0.33
SGCE-207ENST00000447873 MAGEB4O15481 346 aaPredicted RBP17.1■□□□□ 0.33
SGCE-207ENST00000447873 KRT8P05787 483 aa17.1■□□□□ 0.33
SGCE-207ENST00000447873 CHRNB4P30926 498 aa17.1■□□□□ 0.33
SGCE-207ENST00000447873 CD79BP40259 229 aa17.1■□□□□ 0.33
SGCE-207ENST00000447873 WNT4P56705 351 aa17.1■□□□□ 0.33
SGCE-207ENST00000447873 GABRA6Q16445 453 aa17.1■□□□□ 0.33
SGCE-207ENST00000447873 CDONQ4KMG0 1287 aa17.1■□□□□ 0.33
SGCE-207ENST00000447873 C4orf17Q53FE4 359 aa17.1■□□□□ 0.33
SGCE-207ENST00000447873 XAF1Q6GPH4 301 aa17.1■□□□□ 0.33
SGCE-207ENST00000447873 CFAP77Q6ZQR2 320 aa17.1■□□□□ 0.33
SGCE-207ENST00000447873 PLEKHG7Q6ZR37 379 aa17.1■□□□□ 0.33
SGCE-207ENST00000447873 SYT9Q86SS6 491 aa17.1■□□□□ 0.33
SGCE-207ENST00000447873 C1orf162Q8NEQ5 155 aaPredicted RBP17.1■□□□□ 0.33
SGCE-207ENST00000447873 OR52N1Q8NH53 320 aa17.1■□□□□ 0.33
SGCE-207ENST00000447873 GATAD2BQ8WXI9 593 aa17.1■□□□□ 0.33
SGCE-207ENST00000447873 FCGR1BQ92637 280 aa17.1■□□□□ 0.33
SGCE-207ENST00000447873 RORBQ92753 470 aa17.1■□□□□ 0.33
SGCE-207ENST00000447873 SLAMF6Q96DU3 332 aa17.1■□□□□ 0.33
SGCE-207ENST00000447873 CCDC120Q96HB5 630 aa17.1■□□□□ 0.33
SGCE-207ENST00000447873 C4orf36Q96KX1 117 aa17.1■□□□□ 0.33
SGCE-207ENST00000447873 MROQ9BYG7 248 aa17.1■□□□□ 0.33
SGCE-207ENST00000447873 CENPMQ9NSP4 180 aa17.1■□□□□ 0.33
SGCE-207ENST00000447873 GNG8Q9UK08 70 aa17.1■□□□□ 0.33
SGCE-207ENST00000447873 TIMM10BQ9Y5J6 103 aa17.1■□□□□ 0.33
SGCE-207ENST00000447873 PRR32B1ATL7 298 aa17.09■□□□□ 0.33
SGCE-207ENST00000447873 J3QLW9 94 aa17.09■□□□□ 0.33
SGCE-207ENST00000447873 MT-ND5P03915 603 aa17.09■□□□□ 0.33
SGCE-207ENST00000447873 LCKP06239 509 aa17.09■□□□□ 0.33
SGCE-207ENST00000447873 PATE4P0C8F1 98 aa17.09■□□□□ 0.33
SGCE-207ENST00000447873 ZNF19P17023 458 aa17.09■□□□□ 0.33
SGCE-207ENST00000447873 ZNF32P17041 273 aa17.09■□□□□ 0.33
SGCE-207ENST00000447873 OR12D2P58182 307 aa17.09■□□□□ 0.33
SGCE-207ENST00000447873 ADORA2A-AS1P86434 159 aa17.09■□□□□ 0.33
SGCE-207ENST00000447873 SCRN3Q0VDG4 424 aa17.09■□□□□ 0.33
SGCE-207ENST00000447873 TSC22D1Q15714 1073 aa17.09■□□□□ 0.33
SGCE-207ENST00000447873 TBRG1Q3YBR2 411 aa17.09■□□□□ 0.33
SGCE-207ENST00000447873 TP53I3Q53FA7 332 aa17.09■□□□□ 0.33
SGCE-207ENST00000447873 FAM220AQ7Z4H9 259 aa17.09■□□□□ 0.33
SGCE-207ENST00000447873 KRT77Q7Z794 578 aa17.09■□□□□ 0.33
SGCE-207ENST00000447873 SPRYD4Q8WW59 207 aaPredicted RBP17.09■□□□□ 0.33
SGCE-207ENST00000447873 OR5M11Q96RB7 305 aa17.09■□□□□ 0.33
SGCE-207ENST00000447873 OR8B4Q96RC9 309 aa17.09■□□□□ 0.33
SGCE-207ENST00000447873 RNF121Q9H920 327 aa17.09■□□□□ 0.33
SGCE-207ENST00000447873 ISG20L2Q9H9L3 353 aaKnown RBP17.09■□□□□ 0.33
SGCE-207ENST00000447873 JKAMPQ9P055 326 aa17.09■□□□□ 0.33
SGCE-207ENST00000447873 ERRFI1Q9UJM3 462 aaPredicted RBP17.09■□□□□ 0.33
SGCE-207ENST00000447873 CHD6Q8TD26 2715 aa17.09■□□□□ 0.33
SGCE-207ENST00000447873 SULT1C4O75897 302 aa17.08■□□□□ 0.32
SGCE-207ENST00000447873 HLA-HP01893 362 aa17.08■□□□□ 0.32
SGCE-207ENST00000447873 CD79AP11912 226 aa17.08■□□□□ 0.32
SGCE-207ENST00000447873 HOXC12P31275 282 aa17.08■□□□□ 0.32
SGCE-207ENST00000447873 NR1H2P55055 460 aa17.08■□□□□ 0.32
SGCE-207ENST00000447873 UBE2NP61088 152 aaKnown RBP17.08■□□□□ 0.32
SGCE-207ENST00000447873 ROM1Q03395 351 aa17.08■□□□□ 0.32
SGCE-207ENST00000447873 SPHARQ15513 63 aa17.08■□□□□ 0.32
SGCE-207ENST00000447873 LRRN1Q6UXK5 716 aa17.08■□□□□ 0.32
SGCE-207ENST00000447873 BHLHA15Q7RTS1 189 aaPredicted RBP17.08■□□□□ 0.32
SGCE-207ENST00000447873 ZNF367Q7RTV3 350 aa17.08■□□□□ 0.32
SGCE-207ENST00000447873 KCTD20Q7Z5Y7 419 aa17.08■□□□□ 0.32
SGCE-207ENST00000447873 DPPA2Q7Z7J5 298 aa17.08■□□□□ 0.32
SGCE-207ENST00000447873 ZNF679Q8IYX0 411 aa17.08■□□□□ 0.32
SGCE-207ENST00000447873 SYS1Q8N2H4 156 aa17.08■□□□□ 0.32
SGCE-207ENST00000447873 RNF133Q8WVZ7 376 aa17.08■□□□□ 0.32
SGCE-207ENST00000447873 ASB5Q8WWX0 329 aa17.08■□□□□ 0.32
SGCE-207ENST00000447873 NANOS1Q8WY41 292 aaKnown RBP17.08■□□□□ 0.32
SGCE-207ENST00000447873 ELOVL3Q9HB03 270 aa17.08■□□□□ 0.32
SGCE-207ENST00000447873 SLCO1C1Q9NYB5 712 aa17.08■□□□□ 0.32
SGCE-207ENST00000447873 ELOVL5Q9NYP7 299 aa17.08■□□□□ 0.32
SGCE-207ENST00000447873 PLEK2Q9NYT0 353 aa17.08■□□□□ 0.32
SGCE-207ENST00000447873 ZNF224Q9NZL3 707 aa17.08■□□□□ 0.32
SGCE-207ENST00000447873 LSM2Q9Y333 95 aaKnown RBP17.08■□□□□ 0.32
SGCE-207ENST00000447873 HIVEP3Q5T1R4 2406 aa17.08■□□□□ 0.32
SGCE-207ENST00000447873 DIDO1Q9BTC0 2240 aaKnown RBP17.08■□□□□ 0.32
SGCE-207ENST00000447873 METTL15A6NJ78 407 aa17.07■□□□□ 0.32
SGCE-207ENST00000447873 UBL3O95164 117 aa17.07■□□□□ 0.32
SGCE-207ENST00000447873 TACSTD2P09758 323 aa17.07■□□□□ 0.32
SGCE-207ENST00000447873 HSMCR30P0CW71 290 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms