RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 SARAFQ96BY9 339 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 SLC25A36Q96CQ1 311 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 ZMYND19Q96E35 227 aaPredicted RBP2.51□□□□□ -2.01
LINC00393-201ENST00000443621 MRPS24Q96EL2 167 aaKnown RBP2.51□□□□□ -2.01
LINC00393-201ENST00000443621 S100A16Q96FQ6 103 aaKnown RBP2.51□□□□□ -2.01
LINC00393-201ENST00000443621 GMPPAQ96IJ6 420 aaPredicted RBP2.51□□□□□ -2.01
LINC00393-201ENST00000443621 C4orf45Q96LM5 186 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 GNRHR2Q96P88 292 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 OR5B2Q96R09 309 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 OR2M2Q96R28 347 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 ATF6BQ99941 703 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 BARHL1Q9BZE3 327 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 OR11A1Q9GZK7 315 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 ACTR6Q9GZN1 396 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 SRRQ9GZT4 340 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 SMOC1Q9H4F8 434 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 ZNF552Q9H707 407 aaPredicted RBP2.51□□□□□ -2.01
LINC00393-201ENST00000443621 MED20Q9H944 212 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 LIN28AQ9H9Z2 209 aaKnown RBP2.51□□□□□ -2.01
LINC00393-201ENST00000443621 CALHM2Q9HA72 323 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 ELOVL3Q9HB03 270 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 PLEKHA1Q9HB21 404 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 SCPEP1Q9HB40 452 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 SMURF1Q9HCE7 757 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 TCF7L1Q9HCS4 588 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 SRA1Q9HD15 236 aaKnown RBP2.51□□□□□ -2.01
LINC00393-201ENST00000443621 ABCB9Q9NP78 766 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 EXOSC4Q9NPD3 245 aaKnown RBP2.51□□□□□ -2.01
LINC00393-201ENST00000443621 OBP2BQ9NPH6 170 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.51□□□□□ -2.01
LINC00393-201ENST00000443621 POLE4Q9NR33 117 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 KLHL1Q9NR64 748 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 PCDHB16Q9NRJ7 776 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 FOXJ2Q9P0K8 574 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 MRM2Q9UI43 246 aaKnown RBP2.51□□□□□ -2.01
LINC00393-201ENST00000443621 GNG8Q9UK08 70 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 FBXL2Q9UKC9 423 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 CDV3Q9UKY7 258 aaKnown RBP2.51□□□□□ -2.01
LINC00393-201ENST00000443621 CAMK2AQ9UQM7 478 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 SLC22A13Q9Y226 551 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 VDAC3Q9Y277 283 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 COA3Q9Y2R0 106 aaPredicted RBP2.51□□□□□ -2.01
LINC00393-201ENST00000443621 TIMM10BQ9Y5J6 103 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 V9GY05 133 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 V9GYH0 126 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 DOCK10Q96BY6 2186 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 DMDP11532 3685 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 ZNF292O60281 2723 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 OTOGLQ3ZCN5 2332 aa2.51□□□□□ -2.01
LINC00393-201ENST00000443621 A0A0C4DFX4 3053 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 KNTC1P50748 2209 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 KIF26BQ2KJY2 2108 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 PIGBOS1A0A0B4J2F0 54 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 A0A0G2JK05 382 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 TEX51A0A1B0GUA7 166 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 TMEM269A0A1B0GVZ9 245 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 PMS2P1A4D2B8 440 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 METTL21EPA6NDL7 271 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 OR6C6A6NF89 314 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 CD8B2A6NJW9 211 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 CENPXA8MT69 81 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 C11orf98E9PRG8 122 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 H3BML4 177 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 GABARAPH6UMI1 98 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 CTDSP2O14595 271 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 GNB5O14775 395 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 SMAD9O15198 467 aaKnown RBP2.5□□□□□ -2.01
LINC00393-201ENST00000443621 MAGEB3O15480 346 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 RGS5O15539 181 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 XRCC3O43542 346 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 XRCC2O43543 280 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 SS18L1O75177 396 aaPredicted RBP2.5□□□□□ -2.01
LINC00393-201ENST00000443621 ZNF780AO75290 641 aaPredicted RBP2.5□□□□□ -2.01
LINC00393-201ENST00000443621 MRPL33O75394 65 aaKnown RBP2.5□□□□□ -2.01
LINC00393-201ENST00000443621 SERPINI2O75830 405 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 AKR7A3O95154 331 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 SYNGR4O95473 234 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 WDPCPO95876 746 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 HLA-DQA2P01906 255 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 CRYABP02511 175 aaKnown RBP2.5□□□□□ -2.01
LINC00393-201ENST00000443621 GYPBP06028 91 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 TPOP07202 933 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 HNRNPCP07910 306 aaKnown RBP eCLIP2.5□□□□□ -2.01
LINC00393-201ENST00000443621 ACAA1P09110 424 aaPredicted RBP2.5□□□□□ -2.01
LINC00393-201ENST00000443621 QDPRP09417 244 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 H2BFMP0C1H6 154 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 OCMP0CE72 109 aaPredicted RBP2.5□□□□□ -2.01
LINC00393-201ENST00000443621 GSTT2BP0CG30 244 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 OR8G3PP0DMU2 310 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 BMP4P12644 408 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 HLA-DOBP13765 273 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 GABRA1P14867 456 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 POU3F2P20265 443 aaPredicted RBP2.5□□□□□ -2.01
LINC00393-201ENST00000443621 ITGA3P26006 1051 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 SHC1P29353 583 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 THBS2P35442 1172 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 DDOSTP39656 456 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 MECP2P51608 486 aaKnown RBP2.5□□□□□ -2.01
LINC00393-201ENST00000443621 MLLT10P55197 1068 aa2.5□□□□□ -2.01
LINC00393-201ENST00000443621 CLDN18P56856 261 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms