RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 NANOS2P60321 138 aaKnown RBP3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 ZNF85Q03923 595 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 RGS1Q08116 209 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 EIF2B1Q14232 305 aaKnown RBP3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 GRB7Q14451 532 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 RAB35Q15286 201 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 QRICH1Q2TAL8 776 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 PTPN20Q4JDL3 420 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 UTF1Q5T230 341 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 SYPL2Q5VXT5 272 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 FAM53AQ6NSI3 398 aaPredicted RBP3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 FAM71F2Q6NXP2 309 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 SPSB3Q6PJ21 355 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 Q6ZRP5 223 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 Q6ZSR9 355 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 MOB2Q70IA6 237 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 SMIM29Q86T20 159 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 CCDC71Q8IV32 467 aaPredicted RBP3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 Q8N402 240 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 MREGQ8N565 214 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 TMEM239Q8WW34 195 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 NAT6Q93015 286 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 FAM131CQ96AQ9 280 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 PPWD1Q96BP3 646 aaKnown RBP3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 PDXPQ96GD0 296 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 RCHY1Q96PM5 261 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 ZNF300Q96RE9 604 aaPredicted RBP3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 DCUN1D5Q9BTE7 237 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 KRTAP17-1Q9BYP8 105 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 WDR41Q9HAD4 459 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 ANKHQ9HCJ1 492 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 ZNF282Q9UDV7 671 aaPredicted RBP3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 PRPF19Q9UMS4 504 aaKnown RBP3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 POLDIP2Q9Y2S7 368 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 GOLT1BQ9Y3E0 138 aa3.41□□□□□ -1.86
CDC42BPA-207ENST00000441725 WRNQ14191 1432 aaPredicted RBP eCLIP3.4□□□□□ -1.86
CDC42BPA-207ENST00000441725 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.4□□□□□ -1.86
CDC42BPA-207ENST00000441725 A0A087WW49 117 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 TRBV11-1A0A0K0K1C0 115 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 A0A1B0GV72 72 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 ZNF840PA6NDX5 716 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 ANKRD65E5RJM6 399 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 G3V4G9 280 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 TGOLN2O43493 480 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 FGF17O60258 216 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 ETHE1O95571 254 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR9G9P0C7N8 305 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 AOC1P19801 751 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 TSFMP43897 325 aaKnown RBP3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 CYB561P49447 251 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 HLCSP50747 726 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 DUSP3P51452 185 aaPredicted RBP3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 CRYBA2P53672 197 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 UBE2MP61081 183 aaKnown RBP3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 RANP62826 216 aaKnown RBP3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 DEFA6Q01524 100 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 CKAP4Q07065 602 aaKnown RBP3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 C1orf61Q13536 156 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 SFT2D3Q587I9 215 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 ZNF544Q6NX49 715 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 ABHD13Q7L211 337 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 PRSS48Q7RTY5 328 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 H2BFWTQ7Z2G1 175 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 TGIF2LXQ8IUE1 241 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 WDFY1Q8IWB7 410 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 SPAG16Q8N0X2 631 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR10W1Q8NGF6 305 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR5L2Q8NGL0 311 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 FNDC8Q8TC99 324 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 TMBIM1Q969X1 311 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 DNAJA3Q96EY1 480 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 TMEM80Q96HE8 168 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 TMEM56Q96MV1 263 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 ZNF75AQ96N20 296 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 PFDN5Q99471 154 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 COPS8Q99627 209 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 SLC6A7Q99884 636 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 TIMM29Q9BSF4 260 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 CCDC59Q9P031 241 aaKnown RBP3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 RNF7Q9UBF6 113 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 KLHL21Q9UJP4 597 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 NPIPA1Q9UND3 350 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 TP53TG5Q9Y2B4 290 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 ZNF337Q9Y3M9 751 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 TMEM56-RWDD3S4R434 201 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 DNMT1P26358 1616 aaKnown RBP3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 KDM5CP41229 1560 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 CHD4Q14839 1912 aa3.4□□□□□ -1.87
CDC42BPA-207ENST00000441725 A0A1W2PPV9 198 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 SAGE2PA6NJ88 616 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 K7EQD1 137 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 PSMD12O00232 456 aaPredicted RBP3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 AZIN1O14977 448 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 N4BP1O75113 896 aaKnown RBP3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 NXPH4O95158 308 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 TNFAIP8O95379 198 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 TDP2O95551 362 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 AP2A1O95782 977 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 TSPAN13O95857 204 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 IFNA21P01568 189 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms