RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 MOGAT1Q96PD6 335 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 MYOZ1Q9NP98 299 aaPredicted RBP18.28■□□□□ 0.52
SHOX2-203ENST00000441443 OR2S2Q9NQN1 319 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 MIOXQ9UGB7 285 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 KCNG2Q9UJ96 466 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 A0A087WV62 115 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 A0A1W2PPE3 182 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 DCDC2BA2VCK2 349 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 SSX5O60225 188 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 ZNF432O94892 652 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 EML2O95834 649 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 AK1P00568 194 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 C5AR1P21730 350 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 SRSF5Q13243 272 aaKnown RBP18.28■□□□□ 0.52
SHOX2-203ENST00000441443 OR52W1Q6IF63 320 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 PAPD4Q6PIY7 484 aaKnown RBP18.28■□□□□ 0.52
SHOX2-203ENST00000441443 TMEM200AQ86VY9 491 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 SKA3Q8IX90 412 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 MRGPRFQ96AM1 343 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 PHB2Q99623 299 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 RHOFQ9HBH0 211 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 FAM157CP0CG43 387 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 ALOX5APP20292 161 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 ABCD3P28288 659 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 IGFALSP35858 605 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 EIF2S3LQ2VIR3 472 aaKnown RBP18.28■□□□□ 0.52
SHOX2-203ENST00000441443 SLC25A42Q86VD7 318 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 GVQW1Q8N7I0 195 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 EXD3Q8N9H8 876 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 SLC22A8Q8TCC7 542 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 ROBO4Q8WZ75 1007 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 DCBLD2Q96PD2 775 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 CMKLR1Q99788 373 aa18.28■□□□□ 0.52
SHOX2-203ENST00000441443 MRPS18BQ9Y676 258 aaKnown RBP18.28■□□□□ 0.52
SHOX2-203ENST00000441443 C5orf52A6NGY3 159 aa18.27■□□□□ 0.52
SHOX2-203ENST00000441443 NDUFS6O75380 124 aaKnown RBP18.27■□□□□ 0.52
SHOX2-203ENST00000441443 PSMB6P28072 239 aa18.27■□□□□ 0.52
SHOX2-203ENST00000441443 HAAOP46952 286 aa18.27■□□□□ 0.52
SHOX2-203ENST00000441443 PRPS1P60891 318 aa18.27■□□□□ 0.52
SHOX2-203ENST00000441443 PMPCAQ10713 525 aa18.27■□□□□ 0.52
SHOX2-203ENST00000441443 ITPRIPL2Q3MIP1 535 aa18.27■□□□□ 0.52
SHOX2-203ENST00000441443 ZNF584Q8IVC4 421 aa18.27■□□□□ 0.52
SHOX2-203ENST00000441443 ACBD4Q8NC06 268 aa18.27■□□□□ 0.52
SHOX2-203ENST00000441443 SLC30A7Q8NEW0 376 aa18.27■□□□□ 0.52
SHOX2-203ENST00000441443 MITD1Q8WV92 249 aa18.27■□□□□ 0.52
SHOX2-203ENST00000441443 TSACCQ96A04 125 aaPredicted RBP18.27■□□□□ 0.52
SHOX2-203ENST00000441443 CLCC1Q96S66 551 aa18.27■□□□□ 0.52
SHOX2-203ENST00000441443 EPOPA6NHQ4 379 aa18.27■□□□□ 0.51
SHOX2-203ENST00000441443 F8VVB4 439 aa18.27■□□□□ 0.51
SHOX2-203ENST00000441443 F8VWA3 439 aa18.27■□□□□ 0.51
SHOX2-203ENST00000441443 NKX2-2O95096 273 aa18.27■□□□□ 0.51
SHOX2-203ENST00000441443 ERCC1P07992 297 aaPredicted RBP18.27■□□□□ 0.51
SHOX2-203ENST00000441443 ZNF44P15621 663 aa18.27■□□□□ 0.51
SHOX2-203ENST00000441443 F2RL1P55085 397 aa18.27■□□□□ 0.51
SHOX2-203ENST00000441443 RPS4XP62701 263 aaKnown RBP18.27■□□□□ 0.51
SHOX2-203ENST00000441443 RPS21P63220 83 aaKnown RBP18.27■□□□□ 0.51
SHOX2-203ENST00000441443 TGIF1Q15583 401 aa18.27■□□□□ 0.51
SHOX2-203ENST00000441443 ZNF776Q68DI1 518 aaPredicted RBP18.27■□□□□ 0.51
SHOX2-203ENST00000441443 PARGQ86W56 976 aa18.27■□□□□ 0.51
SHOX2-203ENST00000441443 GATSQ8NAP1 163 aa18.27■□□□□ 0.51
SHOX2-203ENST00000441443 CYTL1Q9NRR1 136 aa18.27■□□□□ 0.51
SHOX2-203ENST00000441443 RPH3AQ9Y2J0 694 aaPredicted RBP18.27■□□□□ 0.51
SHOX2-203ENST00000441443 GPR75O95800 540 aa18.26■□□□□ 0.51
SHOX2-203ENST00000441443 SFTA3P0C7M3 94 aa18.26■□□□□ 0.51
SHOX2-203ENST00000441443 PTAFRP25105 342 aa18.26■□□□□ 0.51
SHOX2-203ENST00000441443 HTR2CP28335 458 aa18.26■□□□□ 0.51
SHOX2-203ENST00000441443 GRK6P43250 576 aa18.26■□□□□ 0.51
SHOX2-203ENST00000441443 ALG10Q5BKT4 473 aa18.26■□□□□ 0.51
SHOX2-203ENST00000441443 LAT2Q9GZY6 243 aa18.26■□□□□ 0.51
SHOX2-203ENST00000441443 ELOVL3Q9HB03 270 aa18.26■□□□□ 0.51
SHOX2-203ENST00000441443 C1orf196B1AJZ1 125 aa18.26■□□□□ 0.51
SHOX2-203ENST00000441443 ADH1BP00325 375 aa18.26■□□□□ 0.51
SHOX2-203ENST00000441443 CRHP06850 196 aa18.26■□□□□ 0.51
SHOX2-203ENST00000441443 CD14P08571 375 aa18.26■□□□□ 0.51
SHOX2-203ENST00000441443 SERPINF1P36955 418 aa18.26■□□□□ 0.51
SHOX2-203ENST00000441443 RASGEF1BQ0VAM2 473 aa18.26■□□□□ 0.51
SHOX2-203ENST00000441443 SHHQ15465 462 aa18.26■□□□□ 0.51
SHOX2-203ENST00000441443 RNASE10Q5GAN6 216 aaKnown RBP18.26■□□□□ 0.51
SHOX2-203ENST00000441443 FAM166AQ6J272 317 aa18.26■□□□□ 0.51
SHOX2-203ENST00000441443 ZNF550Q7Z398 422 aa18.26■□□□□ 0.51
SHOX2-203ENST00000441443 ZSCAN4Q8NAM6 433 aaPredicted RBP18.26■□□□□ 0.51
SHOX2-203ENST00000441443 BHLHE23Q8NDY6 225 aa18.26■□□□□ 0.51
SHOX2-203ENST00000441443 OR10G6Q8NH81 332 aa18.26■□□□□ 0.51
SHOX2-203ENST00000441443 OR2A5Q96R48 311 aa18.26■□□□□ 0.51
SHOX2-203ENST00000441443 NAA11Q9BSU3 229 aaPredicted RBP18.26■□□□□ 0.51
SHOX2-203ENST00000441443 SYT4Q9H2B2 425 aa18.26■□□□□ 0.51
SHOX2-203ENST00000441443 TAS2R4Q9NYW5 299 aa18.26■□□□□ 0.51
SHOX2-203ENST00000441443 GHRLQ9UBU3 117 aa18.26■□□□□ 0.51
SHOX2-203ENST00000441443 TBC1D29Q9UFV1 150 aa18.26■□□□□ 0.51
SHOX2-203ENST00000441443 DTX4Q9Y2E6 619 aa18.26■□□□□ 0.51
SHOX2-203ENST00000441443 ARID1AO14497 2285 aa18.26■□□□□ 0.51
SHOX2-203ENST00000441443 TEX13DA0A0J9YY54 714 aaPredicted RBP18.25■□□□□ 0.51
SHOX2-203ENST00000441443 MSGN1A6NI15 193 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 TXNL1O43396 289 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 CSTAP01040 98 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 S100A8P05109 93 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 SMIM10L1P0DMW3 83 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 SQSTM1Q13501 440 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 OR51A2Q8NGJ7 313 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 CMBLQ96DG6 245 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms